RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 NISCHQ9Y2I1 1504 aa30.3■■■□□ 2.44
PDZRN3-201ENST00000263666 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.15
PDZRN3-201ENST00000263666 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
PDZRN3-201ENST00000263666 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
PDZRN3-201ENST00000263666 EHMT2Q96KQ7 1210 aa26.76■■□□□ 1.87
PDZRN3-201ENST00000263666 PCGF6Q9BYE7 350 aa26.72■■□□□ 1.87
PDZRN3-201ENST00000263666 FAM9AQ8IZU1 332 aaPredicted RBP26.3■■□□□ 1.8
PDZRN3-201ENST00000263666 CHIC1Q5VXU3 224 aa26.26■■□□□ 1.79
PDZRN3-201ENST00000263666 LOC105371045A0A1W2PR82 267 aa26.18■■□□□ 1.78
PDZRN3-201ENST00000263666 PPARGC1BQ86YN6 1023 aaKnown RBP26.12■■□□□ 1.77
PDZRN3-201ENST00000263666 HRCP23327 699 aa26.02■■□□□ 1.76
PDZRN3-201ENST00000263666 TTBK1Q5TCY1 1321 aaPredicted RBP25.85■■□□□ 1.73
PDZRN3-201ENST00000263666 ABCC9O60706 1549 aa25.8■■□□□ 1.72
PDZRN3-201ENST00000263666 TRIM41Q8WV44 630 aa25.72■■□□□ 1.71
PDZRN3-201ENST00000263666 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
PDZRN3-201ENST00000263666 TRIM26Q12899 539 aaPredicted RBP25.43■■□□□ 1.66
PDZRN3-201ENST00000263666 ZCCHC6Q5VYS8 1495 aaKnown RBP25.41■■□□□ 1.66
PDZRN3-201ENST00000263666 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
PDZRN3-201ENST00000263666 CCER1Q8TC90 406 aaPredicted RBP25.17■■□□□ 1.62
PDZRN3-201ENST00000263666 RANGAP1P46060 587 aaPredicted RBP25.15■■□□□ 1.62
PDZRN3-201ENST00000263666 PABPN1Q86U42 306 aaKnown RBP eCLIP25.13■■□□□ 1.61
PDZRN3-201ENST00000263666 ZEB1P37275 1124 aaPredicted RBP25.02■■□□□ 1.6
PDZRN3-201ENST00000263666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.99■■□□□ 1.59
PDZRN3-201ENST00000263666 UBTFP17480 764 aaKnown RBP24.89■■□□□ 1.57
PDZRN3-201ENST00000263666 YTHDC1Q96MU7 727 aaKnown RBP24.78■■□□□ 1.56
PDZRN3-201ENST00000263666 DCAF1Q9Y4B6 1507 aa24.69■■□□□ 1.54
PDZRN3-201ENST00000263666 SCRIBQ14160 1630 aa24.67■■□□□ 1.54
PDZRN3-201ENST00000263666 APLP2Q06481 763 aa24.62■■□□□ 1.53
PDZRN3-201ENST00000263666 HNRNPUL2Q1KMD3 747 aaKnown RBP24.56■■□□□ 1.52
PDZRN3-201ENST00000263666 CENPBP07199 599 aaPredicted RBP24.49■■□□□ 1.51
PDZRN3-201ENST00000263666 RSF1Q96T23 1441 aaPredicted RBP24.43■■□□□ 1.5
PDZRN3-201ENST00000263666 DIEXFQ68CQ4 756 aaKnown RBP24.4■■□□□ 1.5
PDZRN3-201ENST00000263666 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
PDZRN3-201ENST00000263666 RB1CC1Q8TDY2 1594 aa24.27■■□□□ 1.48
PDZRN3-201ENST00000263666 GTF3C3Q9Y5Q9 886 aa24.23■■□□□ 1.47
PDZRN3-201ENST00000263666 NACADO15069 1562 aa24.23■■□□□ 1.47
PDZRN3-201ENST00000263666 ITGAEP38570 1179 aa24.22■■□□□ 1.47
PDZRN3-201ENST00000263666 PELP1Q8IZL8 1130 aaKnown RBP24.18■■□□□ 1.46
PDZRN3-201ENST00000263666 ATP1B4Q9UN42 357 aaPredicted RBP24.15■■□□□ 1.46
PDZRN3-201ENST00000263666 CECR2Q9BXF3 1484 aa24.14■■□□□ 1.45
PDZRN3-201ENST00000263666 NEUROD1Q13562 356 aa24.11■■□□□ 1.45
PDZRN3-201ENST00000263666 ACIN1Q9UKV3 1341 aaKnown RBP24.06■■□□□ 1.44
PDZRN3-201ENST00000263666 CSRNP3Q8WYN3 585 aa24.01■■□□□ 1.43
PDZRN3-201ENST00000263666 ZNF316A6NFI3 1004 aaPredicted RBP23.88■■□□□ 1.41
PDZRN3-201ENST00000263666 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
PDZRN3-201ENST00000263666 CEP162Q5TB80 1403 aa23.7■■□□□ 1.38
PDZRN3-201ENST00000263666 MIER1Q8N108 512 aa23.69■■□□□ 1.38
PDZRN3-201ENST00000263666 SOGA1O94964 1423 aa23.68■■□□□ 1.38
PDZRN3-201ENST00000263666 ABCC8Q09428 1581 aa23.66■■□□□ 1.38
PDZRN3-201ENST00000263666 WIZO95785 1651 aa23.62■■□□□ 1.37
PDZRN3-201ENST00000263666 CCDC88BA6NC98 1476 aa23.59■■□□□ 1.37
PDZRN3-201ENST00000263666 BCANQ96GW7 911 aa23.56■■□□□ 1.36
PDZRN3-201ENST00000263666 P3H3Q8IVL6 736 aa23.52■■□□□ 1.36
PDZRN3-201ENST00000263666 FAM50AQ14320 339 aaKnown RBP23.51■■□□□ 1.35
PDZRN3-201ENST00000263666 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
PDZRN3-201ENST00000263666 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
PDZRN3-201ENST00000263666 RUSC2Q8N2Y8 1516 aa23.41■■□□□ 1.34
PDZRN3-201ENST00000263666 CLIP1P30622 1438 aa23.4■■□□□ 1.34
PDZRN3-201ENST00000263666 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
PDZRN3-201ENST00000263666 TNIKQ9UKE5 1360 aa23.38■■□□□ 1.33
PDZRN3-201ENST00000263666 WRNQ14191 1432 aaPredicted RBP eCLIP23.32■■□□□ 1.32
PDZRN3-201ENST00000263666 HIRIP3Q9BW71 556 aaPredicted RBP23.32■■□□□ 1.32
PDZRN3-201ENST00000263666 NEFLP07196 543 aa23.29■■□□□ 1.32
PDZRN3-201ENST00000263666 GOLGA3Q08378 1498 aa23.28■■□□□ 1.32
PDZRN3-201ENST00000263666 FBLN2P98095 1184 aa23.24■■□□□ 1.31
PDZRN3-201ENST00000263666 DDX10Q13206 875 aaKnown RBP23.19■■□□□ 1.3
PDZRN3-201ENST00000263666 ARID3CA6NKF2 412 aa23.16■■□□□ 1.3
PDZRN3-201ENST00000263666 POLR3GLQ9BT43 218 aa23.16■■□□□ 1.3
PDZRN3-201ENST00000263666 KANK4Q5T7N3 995 aaPredicted RBP23.12■■□□□ 1.29
PDZRN3-201ENST00000263666 EEA1Q15075 1411 aa23.09■■□□□ 1.29
PDZRN3-201ENST00000263666 TRIM52Q96A61 297 aa23.05■■□□□ 1.28
PDZRN3-201ENST00000263666 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
PDZRN3-201ENST00000263666 FKBP8Q14318 412 aa23.01■■□□□ 1.27
PDZRN3-201ENST00000263666 MYT1Q01538 1121 aa23■■□□□ 1.27
PDZRN3-201ENST00000263666 TOP2AP11388 1531 aaKnown RBP23■■□□□ 1.27
PDZRN3-201ENST00000263666 ERICH6Q7L0X2 663 aa22.99■■□□□ 1.27
PDZRN3-201ENST00000263666 SIN3AQ96ST3 1273 aa22.99■■□□□ 1.27
PDZRN3-201ENST00000263666 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
PDZRN3-201ENST00000263666 SMARCA2P51531 1590 aa22.95■■□□□ 1.27
PDZRN3-201ENST00000263666 ATAD2BQ9ULI0 1458 aa22.95■■□□□ 1.26
PDZRN3-201ENST00000263666 RAPGEF2Q9Y4G8 1499 aa22.93■■□□□ 1.26
PDZRN3-201ENST00000263666 VPS8Q8N3P4 1428 aa22.92■■□□□ 1.26
PDZRN3-201ENST00000263666 ANP32CO43423 234 aa22.91■■□□□ 1.26
PDZRN3-201ENST00000263666 KCNH8Q96L42 1107 aa22.9■■□□□ 1.26
PDZRN3-201ENST00000263666 IRX6P78412 446 aaPredicted RBP22.85■■□□□ 1.25
PDZRN3-201ENST00000263666 CHIC2Q9UKJ5 165 aa22.84■■□□□ 1.25
PDZRN3-201ENST00000263666 SUPT16HQ9Y5B9 1047 aaKnown RBP22.83■■□□□ 1.25
PDZRN3-201ENST00000263666 ZNF326Q5BKZ1 582 aaKnown RBP22.8■■□□□ 1.24
PDZRN3-201ENST00000263666 SENP3-EIF4A1A0A087X0R7 540 aa22.78■■□□□ 1.24
PDZRN3-201ENST00000263666 MYT1LQ9UL68 1186 aa22.74■■□□□ 1.23
PDZRN3-201ENST00000263666 HNRNPUQ00839 825 aaKnown RBP eCLIP22.71■■□□□ 1.23
PDZRN3-201ENST00000263666 CCNB3Q8WWL7 1395 aa22.7■■□□□ 1.22
PDZRN3-201ENST00000263666 TONSLQ96HA7 1378 aa22.69■■□□□ 1.22
PDZRN3-201ENST00000263666 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
PDZRN3-201ENST00000263666 DHX57Q6P158 1386 aaKnown RBP22.67■■□□□ 1.22
PDZRN3-201ENST00000263666 RRP7BPQ9NSQ0 103 aa22.65■■□□□ 1.22
PDZRN3-201ENST00000263666 CADPSQ9ULU8 1353 aa22.64■■□□□ 1.21
PDZRN3-201ENST00000263666 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.21
PDZRN3-201ENST00000263666 ERCC6Q03468 1493 aa22.62■■□□□ 1.21
PDZRN3-201ENST00000263666 EIF4G1Q04637 1599 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms