RNA–Protein interactions for RNA: ENST00000579393.1

CCND3P2-201, Transcript of cyclin D3 pseudogene 2, humanhuman

BASIC

Gene CCND3P2, Length 537 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3P2-201ENST00000579393 NISCHQ9Y2I1 1504 aa32.27■■■□□ 2.76
CCND3P2-201ENST00000579393 CCDC180Q9P1Z9 1646 aa28.7■■■□□ 2.19
CCND3P2-201ENST00000579393 ABCC9O60706 1549 aa28.19■■■□□ 2.1
CCND3P2-201ENST00000579393 RB1CC1Q8TDY2 1594 aa27.02■■□□□ 1.92
CCND3P2-201ENST00000579393 NACADO15069 1562 aa26.98■■□□□ 1.91
CCND3P2-201ENST00000579393 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
CCND3P2-201ENST00000579393 DCAF8L2P0C7V8 631 aa26.87■■□□□ 1.89
CCND3P2-201ENST00000579393 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
CCND3P2-201ENST00000579393 DCAF1Q9Y4B6 1507 aa26.68■■□□□ 1.86
CCND3P2-201ENST00000579393 UNC13AQ9UPW8 1703 aa26.53■■□□□ 1.84
CCND3P2-201ENST00000579393 BICRAQ9NZM4 1560 aa26.34■■□□□ 1.81
CCND3P2-201ENST00000579393 PABPN1Q86U42 306 aaKnown RBP eCLIP26.32■■□□□ 1.8
CCND3P2-201ENST00000579393 SCRIBQ14160 1630 aa26.21■■□□□ 1.79
CCND3P2-201ENST00000579393 DNAJC5BQ9UF47 199 aa26.05■■□□□ 1.76
CCND3P2-201ENST00000579393 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
CCND3P2-201ENST00000579393 EIF4G1Q04637 1599 aaKnown RBP25.59■■□□□ 1.69
CCND3P2-201ENST00000579393 CC2D2AQ9P2K1 1620 aa25.51■■□□□ 1.67
CCND3P2-201ENST00000579393 CECR2Q9BXF3 1484 aa25.31■■□□□ 1.64
CCND3P2-201ENST00000579393 SMARCA4P51532 1647 aa25.06■■□□□ 1.6
CCND3P2-201ENST00000579393 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
CCND3P2-201ENST00000579393 ATAD2BQ9ULI0 1458 aa24.95■■□□□ 1.58
CCND3P2-201ENST00000579393 NCAPD3P42695 1498 aa24.93■■□□□ 1.58
CCND3P2-201ENST00000579393 MROH2BQ7Z745 1585 aa24.91■■□□□ 1.58
CCND3P2-201ENST00000579393 SMARCA2P51531 1590 aa24.85■■□□□ 1.57
CCND3P2-201ENST00000579393 PEG3Q9GZU2 1588 aa24.83■■□□□ 1.57
CCND3P2-201ENST00000579393 HMGXB3Q12766 1538 aa24.8■■□□□ 1.56
CCND3P2-201ENST00000579393 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
CCND3P2-201ENST00000579393 WIZO95785 1651 aa24.62■■□□□ 1.53
CCND3P2-201ENST00000579393 RSF1Q96T23 1441 aaPredicted RBP24.56■■□□□ 1.52
CCND3P2-201ENST00000579393 NESP48681 1621 aa24.42■■□□□ 1.5
CCND3P2-201ENST00000579393 TOP2AP11388 1531 aaKnown RBP24.31■■□□□ 1.48
CCND3P2-201ENST00000579393 LAMC3Q9Y6N6 1575 aa24.26■■□□□ 1.47
CCND3P2-201ENST00000579393 ERCC6Q03468 1493 aa24.21■■□□□ 1.47
CCND3P2-201ENST00000579393 CADPSQ9ULU8 1353 aa24.17■■□□□ 1.46
CCND3P2-201ENST00000579393 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
CCND3P2-201ENST00000579393 THOC2Q8NI27 1593 aaKnown RBP24.07■■□□□ 1.44
CCND3P2-201ENST00000579393 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
CCND3P2-201ENST00000579393 CCDC88BA6NC98 1476 aa24.05■■□□□ 1.44
CCND3P2-201ENST00000579393 CFTRP13569 1480 aa24.05■■□□□ 1.44
CCND3P2-201ENST00000579393 CUX2O14529 1486 aa24.03■■□□□ 1.44
CCND3P2-201ENST00000579393 FANCD2Q9BXW9 1451 aa23.91■■□□□ 1.42
CCND3P2-201ENST00000579393 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
CCND3P2-201ENST00000579393 CEP164Q9UPV0 1460 aa23.86■■□□□ 1.41
CCND3P2-201ENST00000579393 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
CCND3P2-201ENST00000579393 WDR62O43379 1518 aa23.82■■□□□ 1.4
CCND3P2-201ENST00000579393 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
CCND3P2-201ENST00000579393 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
CCND3P2-201ENST00000579393 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
CCND3P2-201ENST00000579393 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
CCND3P2-201ENST00000579393 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
CCND3P2-201ENST00000579393 DNAJC5Q9H3Z4 198 aa23.42■■□□□ 1.34
CCND3P2-201ENST00000579393 CUX1P39880 1505 aa23.37■■□□□ 1.33
CCND3P2-201ENST00000579393 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
CCND3P2-201ENST00000579393 ZNF608Q9ULD9 1512 aaPredicted RBP23.35■■□□□ 1.33
CCND3P2-201ENST00000579393 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
CCND3P2-201ENST00000579393 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.32
CCND3P2-201ENST00000579393 FGD5Q6ZNL6 1462 aa23.26■■□□□ 1.31
CCND3P2-201ENST00000579393 RAD54L2Q9Y4B4 1467 aa23.25■■□□□ 1.31
CCND3P2-201ENST00000579393 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
CCND3P2-201ENST00000579393 SOGA1O94964 1423 aa23.19■■□□□ 1.3
CCND3P2-201ENST00000579393 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.3
CCND3P2-201ENST00000579393 SYNJ1O43426 1573 aa23.14■■□□□ 1.29
CCND3P2-201ENST00000579393 WDR97A6NE52 1622 aa23.13■■□□□ 1.29
CCND3P2-201ENST00000579393 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
CCND3P2-201ENST00000579393 WRNQ14191 1432 aaPredicted RBP eCLIP23.1■■□□□ 1.29
CCND3P2-201ENST00000579393 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
CCND3P2-201ENST00000579393 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
CCND3P2-201ENST00000579393 ABCA10Q8WWZ4 1543 aa23.03■■□□□ 1.28
CCND3P2-201ENST00000579393 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
CCND3P2-201ENST00000579393 OSCARQ8IYS5 282 aa22.97■■□□□ 1.27
CCND3P2-201ENST00000579393 CHD1O14646 1710 aa22.96■■□□□ 1.27
CCND3P2-201ENST00000579393 SNAPC4Q5SXM2 1469 aa22.94■■□□□ 1.26
CCND3P2-201ENST00000579393 GRIN2BQ13224 1484 aa22.93■■□□□ 1.26
CCND3P2-201ENST00000579393 GAPVD1Q14C86 1478 aa22.93■■□□□ 1.26
CCND3P2-201ENST00000579393 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
CCND3P2-201ENST00000579393 MAGI1Q96QZ7 1491 aaPredicted RBP22.87■■□□□ 1.25
CCND3P2-201ENST00000579393 FBLN2P98095 1184 aa22.81■■□□□ 1.24
CCND3P2-201ENST00000579393 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
CCND3P2-201ENST00000579393 ADAMTS12P58397 1594 aa22.75■■□□□ 1.23
CCND3P2-201ENST00000579393 CHMP7Q8WUX9 453 aaPredicted RBP22.73■■□□□ 1.23
CCND3P2-201ENST00000579393 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
CCND3P2-201ENST00000579393 CLASP1Q7Z460 1538 aa22.72■■□□□ 1.23
CCND3P2-201ENST00000579393 RIMBP3CA6NJZ7 1639 aa22.72■■□□□ 1.23
CCND3P2-201ENST00000579393 RIMBP3BA6NNM3 1639 aa22.72■■□□□ 1.23
CCND3P2-201ENST00000579393 RIMBP3Q9UFD9 1639 aa22.72■■□□□ 1.23
CCND3P2-201ENST00000579393 ARHGEF11O15085 1522 aa22.69■■□□□ 1.22
CCND3P2-201ENST00000579393 GRIN2AQ12879 1464 aa22.66■■□□□ 1.22
CCND3P2-201ENST00000579393 FHAD1B1AJZ9 1412 aa22.65■■□□□ 1.22
CCND3P2-201ENST00000579393 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
CCND3P2-201ENST00000579393 NUP160Q12769 1436 aa22.59■■□□□ 1.21
CCND3P2-201ENST00000579393 KIF27Q86VH2 1401 aa22.59■■□□□ 1.21
CCND3P2-201ENST00000579393 IGF1RP08069 1367 aa22.59■■□□□ 1.21
CCND3P2-201ENST00000579393 TRIM41Q8WV44 630 aa22.58■■□□□ 1.21
CCND3P2-201ENST00000579393 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
CCND3P2-201ENST00000579393 RUSC2Q8N2Y8 1516 aa22.51■■□□□ 1.19
CCND3P2-201ENST00000579393 CUL7Q14999 1698 aa22.49■■□□□ 1.19
CCND3P2-201ENST00000579393 ERCC6L2Q5T890 1561 aa22.46■■□□□ 1.19
CCND3P2-201ENST00000579393 SHROOM2Q13796 1616 aa22.45■■□□□ 1.18
CCND3P2-201ENST00000579393 CYB5RLQ6IPT4 315 aa22.43■■□□□ 1.18
CCND3P2-201ENST00000579393 CARMIL1Q5VZK9 1371 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms