RNA–Protein interactions for RNA: ENST00000458657.6

C1orf228-218, Transcript of Uncharacterized protein C1orf228, humanhuman

APPRIS P2 TSL 5 BASIC

Gene C1orf228, Length 1,818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-218ENST00000458657 NISCHQ9Y2I1 1504 aa33.5■■■□□ 2.95
C1orf228-218ENST00000458657 CCDC180Q9P1Z9 1646 aa29.3■■■□□ 2.28
C1orf228-218ENST00000458657 ZCCHC6Q5VYS8 1495 aaKnown RBP28.12■■■□□ 2.09
C1orf228-218ENST00000458657 ABCC9O60706 1549 aa27.86■■■□□ 2.05
C1orf228-218ENST00000458657 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
C1orf228-218ENST00000458657 DCAF1Q9Y4B6 1507 aa27.66■■■□□ 2.02
C1orf228-218ENST00000458657 MYO15BQ96JP2 1530 aa27.37■■□□□ 1.97
C1orf228-218ENST00000458657 SHROOM4Q9ULL8 1493 aa27.3■■□□□ 1.96
C1orf228-218ENST00000458657 NACADO15069 1562 aa27.29■■□□□ 1.96
C1orf228-218ENST00000458657 RB1CC1Q8TDY2 1594 aa27.11■■□□□ 1.93
C1orf228-218ENST00000458657 SCRIBQ14160 1630 aa26.97■■□□□ 1.91
C1orf228-218ENST00000458657 UNC13AQ9UPW8 1703 aa26.65■■□□□ 1.86
C1orf228-218ENST00000458657 BICRAQ9NZM4 1560 aa26.32■■□□□ 1.8
C1orf228-218ENST00000458657 PABPN1Q86U42 306 aaKnown RBP eCLIP26.23■■□□□ 1.79
C1orf228-218ENST00000458657 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
C1orf228-218ENST00000458657 CECR2Q9BXF3 1484 aa26.07■■□□□ 1.76
C1orf228-218ENST00000458657 RSF1Q96T23 1441 aaPredicted RBP25.93■■□□□ 1.74
C1orf228-218ENST00000458657 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
C1orf228-218ENST00000458657 BAZ1AQ9NRL2 1556 aaPredicted RBP25.89■■□□□ 1.73
C1orf228-218ENST00000458657 SMARCA4P51532 1647 aa25.82■■□□□ 1.72
C1orf228-218ENST00000458657 WIZO95785 1651 aa25.72■■□□□ 1.71
C1orf228-218ENST00000458657 EIF4G1Q04637 1599 aaKnown RBP25.53■■□□□ 1.68
C1orf228-218ENST00000458657 PEG3Q9GZU2 1588 aa25.47■■□□□ 1.67
C1orf228-218ENST00000458657 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
C1orf228-218ENST00000458657 ATAD2BQ9ULI0 1458 aa25.39■■□□□ 1.66
C1orf228-218ENST00000458657 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
C1orf228-218ENST00000458657 BAZ1BQ9UIG0 1483 aaKnown RBP25.26■■□□□ 1.63
C1orf228-218ENST00000458657 CC2D2AQ9P2K1 1620 aa25.21■■□□□ 1.63
C1orf228-218ENST00000458657 NCAPD3P42695 1498 aa25.17■■□□□ 1.62
C1orf228-218ENST00000458657 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
C1orf228-218ENST00000458657 CCDC88BA6NC98 1476 aa25.13■■□□□ 1.61
C1orf228-218ENST00000458657 CHIC1Q5VXU3 224 aa24.92■■□□□ 1.58
C1orf228-218ENST00000458657 DNAJC5BQ9UF47 199 aa24.66■■□□□ 1.54
C1orf228-218ENST00000458657 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
C1orf228-218ENST00000458657 CFTRP13569 1480 aa24.59■■□□□ 1.53
C1orf228-218ENST00000458657 TRIM41Q8WV44 630 aa24.57■■□□□ 1.52
C1orf228-218ENST00000458657 PRDM2Q13029 1718 aa24.54■■□□□ 1.52
C1orf228-218ENST00000458657 CADPSQ9ULU8 1353 aa24.52■■□□□ 1.52
C1orf228-218ENST00000458657 WRNQ14191 1432 aaPredicted RBP eCLIP24.42■■□□□ 1.5
C1orf228-218ENST00000458657 NESP48681 1621 aa24.42■■□□□ 1.5
C1orf228-218ENST00000458657 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
C1orf228-218ENST00000458657 LAMC3Q9Y6N6 1575 aa24.37■■□□□ 1.49
C1orf228-218ENST00000458657 FANCD2Q9BXW9 1451 aa24.29■■□□□ 1.48
C1orf228-218ENST00000458657 TOP2BQ02880 1626 aa24.26■■□□□ 1.47
C1orf228-218ENST00000458657 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
C1orf228-218ENST00000458657 CUX1P39880 1505 aa24.23■■□□□ 1.47
C1orf228-218ENST00000458657 FAM9AQ8IZU1 332 aaPredicted RBP24.17■■□□□ 1.46
C1orf228-218ENST00000458657 PDS5BQ9NTI5 1447 aa24.16■■□□□ 1.46
C1orf228-218ENST00000458657 KIF21AQ7Z4S6 1674 aa24.16■■□□□ 1.46
C1orf228-218ENST00000458657 CEP164Q9UPV0 1460 aa24.15■■□□□ 1.46
C1orf228-218ENST00000458657 SOGA1O94964 1423 aa24.09■■□□□ 1.45
C1orf228-218ENST00000458657 DNMBPQ6XZF7 1577 aa24.05■■□□□ 1.44
C1orf228-218ENST00000458657 RUSC2Q8N2Y8 1516 aa24.02■■□□□ 1.44
C1orf228-218ENST00000458657 TOPBP1Q92547 1522 aa24.01■■□□□ 1.43
C1orf228-218ENST00000458657 URB2Q14146 1524 aaKnown RBP24.01■■□□□ 1.43
C1orf228-218ENST00000458657 LOC105371045A0A1W2PR82 267 aa23.99■■□□□ 1.43
C1orf228-218ENST00000458657 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
C1orf228-218ENST00000458657 EEA1Q15075 1411 aa23.95■■□□□ 1.42
C1orf228-218ENST00000458657 ERCC6Q03468 1493 aa23.89■■□□□ 1.41
C1orf228-218ENST00000458657 MRC2Q9UBG0 1479 aa23.89■■□□□ 1.41
C1orf228-218ENST00000458657 POLA1P09884 1462 aaPredicted RBP23.88■■□□□ 1.41
C1orf228-218ENST00000458657 EHMT2Q96KQ7 1210 aa23.87■■□□□ 1.41
C1orf228-218ENST00000458657 CSRNP3Q8WYN3 585 aa23.84■■□□□ 1.41
C1orf228-218ENST00000458657 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
C1orf228-218ENST00000458657 CUX2O14529 1486 aa23.8■■□□□ 1.4
C1orf228-218ENST00000458657 KIF27Q86VH2 1401 aa23.8■■□□□ 1.4
C1orf228-218ENST00000458657 WDR62O43379 1518 aa23.78■■□□□ 1.4
C1orf228-218ENST00000458657 THOC2Q8NI27 1593 aaKnown RBP23.77■■□□□ 1.4
C1orf228-218ENST00000458657 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
C1orf228-218ENST00000458657 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
C1orf228-218ENST00000458657 KIF21BO75037 1637 aa23.71■■□□□ 1.39
C1orf228-218ENST00000458657 TARBP1Q13395 1621 aaKnown RBP23.68■■□□□ 1.38
C1orf228-218ENST00000458657 GOLGA3Q08378 1498 aa23.66■■□□□ 1.38
C1orf228-218ENST00000458657 PRXQ9BXM0 1461 aa23.61■■□□□ 1.37
C1orf228-218ENST00000458657 RAPGEF2Q9Y4G8 1499 aa23.61■■□□□ 1.37
C1orf228-218ENST00000458657 ABCA5Q8WWZ7 1642 aa23.6■■□□□ 1.37
C1orf228-218ENST00000458657 IGF1RP08069 1367 aa23.59■■□□□ 1.37
C1orf228-218ENST00000458657 TDRD9Q8NDG6 1382 aaKnown RBP23.59■■□□□ 1.37
C1orf228-218ENST00000458657 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
C1orf228-218ENST00000458657 UBTFP17480 764 aaKnown RBP23.56■■□□□ 1.36
C1orf228-218ENST00000458657 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
C1orf228-218ENST00000458657 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
C1orf228-218ENST00000458657 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
C1orf228-218ENST00000458657 ZNF608Q9ULD9 1512 aaPredicted RBP23.48■■□□□ 1.35
C1orf228-218ENST00000458657 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
C1orf228-218ENST00000458657 CARMIL1Q5VZK9 1371 aa23.48■■□□□ 1.35
C1orf228-218ENST00000458657 CUL7Q14999 1698 aa23.47■■□□□ 1.35
C1orf228-218ENST00000458657 AQRO60306 1485 aaKnown RBP eCLIP23.47■■□□□ 1.35
C1orf228-218ENST00000458657 CEP162Q5TB80 1403 aa23.43■■□□□ 1.34
C1orf228-218ENST00000458657 EIF4G3O43432 1585 aaKnown RBP23.42■■□□□ 1.34
C1orf228-218ENST00000458657 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
C1orf228-218ENST00000458657 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
C1orf228-218ENST00000458657 CLIP1P30622 1438 aa23.28■■□□□ 1.32
C1orf228-218ENST00000458657 RANGAP1P46060 587 aaPredicted RBP23.28■■□□□ 1.32
C1orf228-218ENST00000458657 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
C1orf228-218ENST00000458657 FHAD1B1AJZ9 1412 aa23.25■■□□□ 1.31
C1orf228-218ENST00000458657 CTTNBP2Q8WZ74 1663 aa23.23■■□□□ 1.31
C1orf228-218ENST00000458657 MAGI1Q96QZ7 1491 aaPredicted RBP23.18■■□□□ 1.3
C1orf228-218ENST00000458657 SYNJ2O15056 1496 aa23.1■■□□□ 1.29
C1orf228-218ENST00000458657 GRIN2AQ12879 1464 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms