RNA–Protein interactions for RNA: ENST00000516997.1

RNA5SP420-201, Transcript of RNA, 5S ribosomal pseudogene 420, humanhuman

BASIC

Gene RNA5SP420, Length 137 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP420-201ENST00000516997 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
RNA5SP420-201ENST00000516997 CCDC180Q9P1Z9 1646 aa28.78■■■□□ 2.2
RNA5SP420-201ENST00000516997 ABCC9O60706 1549 aa28.12■■■□□ 2.09
RNA5SP420-201ENST00000516997 NACADO15069 1562 aa27.03■■□□□ 1.92
RNA5SP420-201ENST00000516997 RB1CC1Q8TDY2 1594 aa27.03■■□□□ 1.92
RNA5SP420-201ENST00000516997 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
RNA5SP420-201ENST00000516997 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
RNA5SP420-201ENST00000516997 MYO15BQ96JP2 1530 aa26.9■■□□□ 1.9
RNA5SP420-201ENST00000516997 DCAF1Q9Y4B6 1507 aa26.8■■□□□ 1.88
RNA5SP420-201ENST00000516997 UNC13AQ9UPW8 1703 aa26.57■■□□□ 1.84
RNA5SP420-201ENST00000516997 BICRAQ9NZM4 1560 aa26.33■■□□□ 1.81
RNA5SP420-201ENST00000516997 PABPN1Q86U42 306 aaKnown RBP eCLIP26.28■■□□□ 1.8
RNA5SP420-201ENST00000516997 SCRIBQ14160 1630 aa26.26■■□□□ 1.79
RNA5SP420-201ENST00000516997 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
RNA5SP420-201ENST00000516997 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
RNA5SP420-201ENST00000516997 EIF4G1Q04637 1599 aaKnown RBP25.56■■□□□ 1.68
RNA5SP420-201ENST00000516997 CC2D2AQ9P2K1 1620 aa25.46■■□□□ 1.67
RNA5SP420-201ENST00000516997 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
RNA5SP420-201ENST00000516997 SMARCA4P51532 1647 aa25.14■■□□□ 1.61
RNA5SP420-201ENST00000516997 BAZ1AQ9NRL2 1556 aaPredicted RBP25.07■■□□□ 1.6
RNA5SP420-201ENST00000516997 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
RNA5SP420-201ENST00000516997 ATAD2BQ9ULI0 1458 aa24.99■■□□□ 1.59
RNA5SP420-201ENST00000516997 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
RNA5SP420-201ENST00000516997 SMARCA2P51531 1590 aa24.91■■□□□ 1.58
RNA5SP420-201ENST00000516997 PEG3Q9GZU2 1588 aa24.91■■□□□ 1.58
RNA5SP420-201ENST00000516997 HMGXB3Q12766 1538 aa24.82■■□□□ 1.56
RNA5SP420-201ENST00000516997 WIZO95785 1651 aa24.75■■□□□ 1.55
RNA5SP420-201ENST00000516997 BAZ1BQ9UIG0 1483 aaKnown RBP24.73■■□□□ 1.55
RNA5SP420-201ENST00000516997 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
RNA5SP420-201ENST00000516997 TOP2AP11388 1531 aaKnown RBP24.43■■□□□ 1.5
RNA5SP420-201ENST00000516997 NESP48681 1621 aa24.39■■□□□ 1.49
RNA5SP420-201ENST00000516997 LAMC3Q9Y6N6 1575 aa24.27■■□□□ 1.48
RNA5SP420-201ENST00000516997 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
RNA5SP420-201ENST00000516997 CCDC88BA6NC98 1476 aa24.17■■□□□ 1.46
RNA5SP420-201ENST00000516997 ERCC6Q03468 1493 aa24.14■■□□□ 1.46
RNA5SP420-201ENST00000516997 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
RNA5SP420-201ENST00000516997 CFTRP13569 1480 aa24.1■■□□□ 1.45
RNA5SP420-201ENST00000516997 PDS5BQ9NTI5 1447 aa24.06■■□□□ 1.44
RNA5SP420-201ENST00000516997 SUPT5HO00267 1087 aaKnown RBP24.04■■□□□ 1.44
RNA5SP420-201ENST00000516997 THOC2Q8NI27 1593 aaKnown RBP24.01■■□□□ 1.43
RNA5SP420-201ENST00000516997 PRDM2Q13029 1718 aa23.96■■□□□ 1.43
RNA5SP420-201ENST00000516997 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
RNA5SP420-201ENST00000516997 CUX2O14529 1486 aa23.93■■□□□ 1.42
RNA5SP420-201ENST00000516997 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
RNA5SP420-201ENST00000516997 MRC2Q9UBG0 1479 aa23.85■■□□□ 1.41
RNA5SP420-201ENST00000516997 WDR62O43379 1518 aa23.8■■□□□ 1.4
RNA5SP420-201ENST00000516997 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
RNA5SP420-201ENST00000516997 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
RNA5SP420-201ENST00000516997 DNMBPQ6XZF7 1577 aa23.54■■□□□ 1.36
RNA5SP420-201ENST00000516997 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
RNA5SP420-201ENST00000516997 CUX1P39880 1505 aa23.44■■□□□ 1.34
RNA5SP420-201ENST00000516997 POLA1P09884 1462 aaPredicted RBP23.38■■□□□ 1.33
RNA5SP420-201ENST00000516997 IFT140Q96RY7 1462 aa23.37■■□□□ 1.33
RNA5SP420-201ENST00000516997 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
RNA5SP420-201ENST00000516997 ZNF608Q9ULD9 1512 aaPredicted RBP23.34■■□□□ 1.33
RNA5SP420-201ENST00000516997 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
RNA5SP420-201ENST00000516997 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
RNA5SP420-201ENST00000516997 SYNJ1O43426 1573 aa23.26■■□□□ 1.31
RNA5SP420-201ENST00000516997 SOGA1O94964 1423 aa23.25■■□□□ 1.31
RNA5SP420-201ENST00000516997 BIVM-ERCC5R4GMW8 1640 aa23.25■■□□□ 1.31
RNA5SP420-201ENST00000516997 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
RNA5SP420-201ENST00000516997 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
RNA5SP420-201ENST00000516997 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
RNA5SP420-201ENST00000516997 AQRO60306 1485 aaKnown RBP eCLIP23.19■■□□□ 1.3
RNA5SP420-201ENST00000516997 DNAJC5Q9H3Z4 198 aa23.19■■□□□ 1.3
RNA5SP420-201ENST00000516997 WDR97A6NE52 1622 aa23.19■■□□□ 1.3
RNA5SP420-201ENST00000516997 TDRD9Q8NDG6 1382 aaKnown RBP23.14■■□□□ 1.3
RNA5SP420-201ENST00000516997 ABCA10Q8WWZ4 1543 aa23.1■■□□□ 1.29
RNA5SP420-201ENST00000516997 ABCA5Q8WWZ7 1642 aa23.04■■□□□ 1.28
RNA5SP420-201ENST00000516997 GAPVD1Q14C86 1478 aa22.99■■□□□ 1.27
RNA5SP420-201ENST00000516997 PBRM1Q86U86 1689 aa22.99■■□□□ 1.27
RNA5SP420-201ENST00000516997 GRIN2BQ13224 1484 aa22.97■■□□□ 1.27
RNA5SP420-201ENST00000516997 CHD1O14646 1710 aa22.96■■□□□ 1.27
RNA5SP420-201ENST00000516997 SNAPC4Q5SXM2 1469 aa22.95■■□□□ 1.26
RNA5SP420-201ENST00000516997 OSCARQ8IYS5 282 aa22.92■■□□□ 1.26
RNA5SP420-201ENST00000516997 MAGI1Q96QZ7 1491 aaPredicted RBP22.91■■□□□ 1.26
RNA5SP420-201ENST00000516997 SYNJ2O15056 1496 aa22.82■■□□□ 1.24
RNA5SP420-201ENST00000516997 FBLN2P98095 1184 aa22.81■■□□□ 1.24
RNA5SP420-201ENST00000516997 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
RNA5SP420-201ENST00000516997 ADAMTS12P58397 1594 aa22.79■■□□□ 1.24
RNA5SP420-201ENST00000516997 CHMP7Q8WUX9 453 aaPredicted RBP22.76■■□□□ 1.23
RNA5SP420-201ENST00000516997 KIF27Q86VH2 1401 aa22.73■■□□□ 1.23
RNA5SP420-201ENST00000516997 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
RNA5SP420-201ENST00000516997 IGF1RP08069 1367 aa22.71■■□□□ 1.23
RNA5SP420-201ENST00000516997 CLASP1Q7Z460 1538 aa22.7■■□□□ 1.22
RNA5SP420-201ENST00000516997 GRIN2AQ12879 1464 aa22.69■■□□□ 1.22
RNA5SP420-201ENST00000516997 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
RNA5SP420-201ENST00000516997 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
RNA5SP420-201ENST00000516997 RIMBP3CA6NJZ7 1639 aa22.63■■□□□ 1.21
RNA5SP420-201ENST00000516997 RIMBP3BA6NNM3 1639 aa22.63■■□□□ 1.21
RNA5SP420-201ENST00000516997 RIMBP3Q9UFD9 1639 aa22.63■■□□□ 1.21
RNA5SP420-201ENST00000516997 CEP170Q5SW79 1584 aa22.63■■□□□ 1.21
RNA5SP420-201ENST00000516997 NUP160Q12769 1436 aa22.62■■□□□ 1.21
RNA5SP420-201ENST00000516997 CUL7Q14999 1698 aa22.6■■□□□ 1.21
RNA5SP420-201ENST00000516997 ARHGEF11O15085 1522 aa22.6■■□□□ 1.21
RNA5SP420-201ENST00000516997 CARMIL1Q5VZK9 1371 aa22.53■■□□□ 1.2
RNA5SP420-201ENST00000516997 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
RNA5SP420-201ENST00000516997 SHROOM2Q13796 1616 aa22.47■■□□□ 1.19
RNA5SP420-201ENST00000516997 ARAP1Q96P48 1450 aa22.45■■□□□ 1.18
RNA5SP420-201ENST00000516997 ERCC6L2Q5T890 1561 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms