RNA–Protein interactions for RNA: ENST00000615670.4

PRAG1-201, Transcript of PEAK1 related, kinase-activating pseudokinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRAG1, Length 4,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAG1-201ENST00000615670 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
PRAG1-201ENST00000615670 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.14
PRAG1-201ENST00000615670 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
PRAG1-201ENST00000615670 SHROOM4Q9ULL8 1493 aa27.29■■□□□ 1.96
PRAG1-201ENST00000615670 EHMT2Q96KQ7 1210 aa26.09■■□□□ 1.77
PRAG1-201ENST00000615670 PCGF6Q9BYE7 350 aa26.05■■□□□ 1.76
PRAG1-201ENST00000615670 APLP2Q06481 763 aa26.01■■□□□ 1.75
PRAG1-201ENST00000615670 ZEB1P37275 1124 aaPredicted RBP25.96■■□□□ 1.75
PRAG1-201ENST00000615670 PELP1Q8IZL8 1130 aaKnown RBP25.95■■□□□ 1.74
PRAG1-201ENST00000615670 FAM9AQ8IZU1 332 aaPredicted RBP25.88■■□□□ 1.73
PRAG1-201ENST00000615670 TRIM41Q8WV44 630 aa25.83■■□□□ 1.73
PRAG1-201ENST00000615670 CENPBP07199 599 aaPredicted RBP25.47■■□□□ 1.67
PRAG1-201ENST00000615670 CCER1Q8TC90 406 aaPredicted RBP25.42■■□□□ 1.66
PRAG1-201ENST00000615670 TRIM26Q12899 539 aaPredicted RBP25.34■■□□□ 1.65
PRAG1-201ENST00000615670 TTBK1Q5TCY1 1321 aaPredicted RBP25.32■■□□□ 1.64
PRAG1-201ENST00000615670 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
PRAG1-201ENST00000615670 HRCP23327 699 aa25.27■■□□□ 1.64
PRAG1-201ENST00000615670 UBTFP17480 764 aaKnown RBP25.24■■□□□ 1.63
PRAG1-201ENST00000615670 RANGAP1P46060 587 aaPredicted RBP24.98■■□□□ 1.59
PRAG1-201ENST00000615670 LOC105371045A0A1W2PR82 267 aa24.89■■□□□ 1.57
PRAG1-201ENST00000615670 MYT1Q01538 1121 aa24.75■■□□□ 1.55
PRAG1-201ENST00000615670 ATP1B4Q9UN42 357 aaPredicted RBP24.74■■□□□ 1.55
PRAG1-201ENST00000615670 PPARGC1BQ86YN6 1023 aaKnown RBP24.72■■□□□ 1.55
PRAG1-201ENST00000615670 NEFLP07196 543 aa24.63■■□□□ 1.53
PRAG1-201ENST00000615670 ERICH6Q7L0X2 663 aa24.58■■□□□ 1.52
PRAG1-201ENST00000615670 YTHDC1Q96MU7 727 aaKnown RBP24.56■■□□□ 1.52
PRAG1-201ENST00000615670 ZCCHC6Q5VYS8 1495 aaKnown RBP24.48■■□□□ 1.51
PRAG1-201ENST00000615670 HNRNPUL2Q1KMD3 747 aaKnown RBP24.33■■□□□ 1.49
PRAG1-201ENST00000615670 ABCC9O60706 1549 aa24.32■■□□□ 1.48
PRAG1-201ENST00000615670 CCDC180Q9P1Z9 1646 aa24.31■■□□□ 1.48
PRAG1-201ENST00000615670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.24■■□□□ 1.47
PRAG1-201ENST00000615670 DIEXFQ68CQ4 756 aaKnown RBP24.23■■□□□ 1.47
PRAG1-201ENST00000615670 ITGAEP38570 1179 aa24.19■■□□□ 1.46
PRAG1-201ENST00000615670 DCAF1Q9Y4B6 1507 aa24.14■■□□□ 1.45
PRAG1-201ENST00000615670 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
PRAG1-201ENST00000615670 CSRNP3Q8WYN3 585 aa23.91■■□□□ 1.42
PRAG1-201ENST00000615670 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
PRAG1-201ENST00000615670 ZNF316A6NFI3 1004 aaPredicted RBP23.83■■□□□ 1.41
PRAG1-201ENST00000615670 FAM50AQ14320 339 aaKnown RBP23.79■■□□□ 1.4
PRAG1-201ENST00000615670 POLR3GLQ9BT43 218 aa23.69■■□□□ 1.38
PRAG1-201ENST00000615670 GTF3C3Q9Y5Q9 886 aa23.68■■□□□ 1.38
PRAG1-201ENST00000615670 ACIN1Q9UKV3 1341 aaKnown RBP23.62■■□□□ 1.37
PRAG1-201ENST00000615670 DAXXQ9UER7 740 aaPredicted RBP23.6■■□□□ 1.37
PRAG1-201ENST00000615670 ANP32CO43423 234 aa23.56■■□□□ 1.36
PRAG1-201ENST00000615670 NEUROD1Q13562 356 aa23.55■■□□□ 1.36
PRAG1-201ENST00000615670 TRIM52Q96A61 297 aa23.54■■□□□ 1.36
PRAG1-201ENST00000615670 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
PRAG1-201ENST00000615670 MYT1LQ9UL68 1186 aa23.49■■□□□ 1.35
PRAG1-201ENST00000615670 RSF1Q96T23 1441 aaPredicted RBP23.48■■□□□ 1.35
PRAG1-201ENST00000615670 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
PRAG1-201ENST00000615670 EEA1Q15075 1411 aa23.43■■□□□ 1.34
PRAG1-201ENST00000615670 RB1CC1Q8TDY2 1594 aa23.36■■□□□ 1.33
PRAG1-201ENST00000615670 NACADO15069 1562 aa23.36■■□□□ 1.33
PRAG1-201ENST00000615670 CNGB1Q14028 1251 aaPredicted RBP23.32■■□□□ 1.32
PRAG1-201ENST00000615670 RTL5Q5HYW3 569 aaPredicted RBP23.28■■□□□ 1.32
PRAG1-201ENST00000615670 CDK11AQ9UQ88 783 aaPredicted RBP23.26■■□□□ 1.31
PRAG1-201ENST00000615670 GOLGA3Q08378 1498 aa23.21■■□□□ 1.31
PRAG1-201ENST00000615670 CLIP1P30622 1438 aa23.21■■□□□ 1.31
PRAG1-201ENST00000615670 P3H3Q8IVL6 736 aa23.2■■□□□ 1.3
PRAG1-201ENST00000615670 BCANQ96GW7 911 aa23.2■■□□□ 1.3
PRAG1-201ENST00000615670 CEP162Q5TB80 1403 aa23.15■■□□□ 1.3
PRAG1-201ENST00000615670 TONSLQ96HA7 1378 aa23.14■■□□□ 1.3
PRAG1-201ENST00000615670 TNIKQ9UKE5 1360 aa23.11■■□□□ 1.29
PRAG1-201ENST00000615670 ZNF326Q5BKZ1 582 aaKnown RBP23.1■■□□□ 1.29
PRAG1-201ENST00000615670 BAZ1AQ9NRL2 1556 aaPredicted RBP23.07■■□□□ 1.28
PRAG1-201ENST00000615670 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
PRAG1-201ENST00000615670 SLC4A1APQ9BWU0 796 aaKnown RBP23.05■■□□□ 1.28
PRAG1-201ENST00000615670 CEP164Q9UPV0 1460 aa23.01■■□□□ 1.27
PRAG1-201ENST00000615670 FBLN2P98095 1184 aa22.97■■□□□ 1.27
PRAG1-201ENST00000615670 SCAF1Q9H7N4 1312 aaKnown RBP22.9■■□□□ 1.26
PRAG1-201ENST00000615670 DDX10Q13206 875 aaKnown RBP22.9■■□□□ 1.26
PRAG1-201ENST00000615670 BAZ1BQ9UIG0 1483 aaKnown RBP22.89■■□□□ 1.26
PRAG1-201ENST00000615670 FKBP8Q14318 412 aa22.88■■□□□ 1.25
PRAG1-201ENST00000615670 MTUS2Q5JR59 1369 aa22.86■■□□□ 1.25
PRAG1-201ENST00000615670 MIER1Q8N108 512 aa22.85■■□□□ 1.25
PRAG1-201ENST00000615670 ZNF777Q9ULD5 760 aaPredicted RBP22.84■■□□□ 1.25
PRAG1-201ENST00000615670 KIF27Q86VH2 1401 aa22.83■■□□□ 1.25
PRAG1-201ENST00000615670 ANP32AP39687 249 aaKnown RBP22.83■■□□□ 1.24
PRAG1-201ENST00000615670 ARID3CA6NKF2 412 aa22.82■■□□□ 1.24
PRAG1-201ENST00000615670 HNRNPUQ00839 825 aaKnown RBP eCLIP22.81■■□□□ 1.24
PRAG1-201ENST00000615670 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
PRAG1-201ENST00000615670 CANXP27824 592 aaKnown RBP22.71■■□□□ 1.23
PRAG1-201ENST00000615670 ZBTB47Q9UFB7 747 aaPredicted RBP22.65■■□□□ 1.22
PRAG1-201ENST00000615670 CHIC2Q9UKJ5 165 aa22.64■■□□□ 1.22
PRAG1-201ENST00000615670 MROH2BQ7Z745 1585 aa22.64■■□□□ 1.22
PRAG1-201ENST00000615670 FAM9BQ8IZU0 186 aa22.63■■□□□ 1.21
PRAG1-201ENST00000615670 NEFMP07197 916 aa22.63■■□□□ 1.21
PRAG1-201ENST00000615670 EIF4G2P78344 907 aaKnown RBP eCLIP22.62■■□□□ 1.21
PRAG1-201ENST00000615670 TSPY4P0CV99 314 aa22.59■■□□□ 1.21
PRAG1-201ENST00000615670 TSPY10P0CW01 314 aa22.59■■□□□ 1.21
PRAG1-201ENST00000615670 MRS2Q9HD23 443 aa22.58■■□□□ 1.2
PRAG1-201ENST00000615670 SOGA1O94964 1423 aa22.57■■□□□ 1.2
PRAG1-201ENST00000615670 TMC1Q8TDI8 760 aa22.57■■□□□ 1.2
PRAG1-201ENST00000615670 VPS8Q8N3P4 1428 aa22.56■■□□□ 1.2
PRAG1-201ENST00000615670 FHAD1B1AJZ9 1412 aa22.55■■□□□ 1.2
PRAG1-201ENST00000615670 CCDC88BA6NC98 1476 aa22.55■■□□□ 1.2
PRAG1-201ENST00000615670 TIMELESSQ9UNS1 1208 aa22.52■■□□□ 1.2
PRAG1-201ENST00000615670 CCNB3Q8WWL7 1395 aa22.51■■□□□ 1.19
PRAG1-201ENST00000615670 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
PRAG1-201ENST00000615670 TOP2AP11388 1531 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms