RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 NISCHQ9Y2I1 1504 aa33.86■■■■□ 3.01
CCHCR1-202ENST00000396263 CCDC180Q9P1Z9 1646 aa29.5■■■□□ 2.31
CCHCR1-202ENST00000396263 ZCCHC6Q5VYS8 1495 aaKnown RBP28.47■■■□□ 2.15
CCHCR1-202ENST00000396263 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
CCHCR1-202ENST00000396263 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
CCHCR1-202ENST00000396263 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
CCHCR1-202ENST00000396263 ABCC9O60706 1549 aa27.92■■■□□ 2.06
CCHCR1-202ENST00000396263 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
CCHCR1-202ENST00000396263 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
CCHCR1-202ENST00000396263 NACADO15069 1562 aa27.43■■□□□ 1.98
CCHCR1-202ENST00000396263 SCRIBQ14160 1630 aa27.21■■□□□ 1.95
CCHCR1-202ENST00000396263 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.95
CCHCR1-202ENST00000396263 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
CCHCR1-202ENST00000396263 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
CCHCR1-202ENST00000396263 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
CCHCR1-202ENST00000396263 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
CCHCR1-202ENST00000396263 CECR2Q9BXF3 1484 aa26.37■■□□□ 1.81
CCHCR1-202ENST00000396263 PABPN1Q86U42 306 aaKnown RBP eCLIP26.33■■□□□ 1.81
CCHCR1-202ENST00000396263 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
CCHCR1-202ENST00000396263 BAZ1AQ9NRL2 1556 aaPredicted RBP26.13■■□□□ 1.77
CCHCR1-202ENST00000396263 HRCP23327 699 aa26.09■■□□□ 1.77
CCHCR1-202ENST00000396263 LOC105371045A0A1W2PR82 267 aa26.05■■□□□ 1.76
CCHCR1-202ENST00000396263 SMARCA4P51532 1647 aa26.05■■□□□ 1.76
CCHCR1-202ENST00000396263 WIZO95785 1651 aa26.03■■□□□ 1.76
CCHCR1-202ENST00000396263 PCGF6Q9BYE7 350 aa25.99■■□□□ 1.75
CCHCR1-202ENST00000396263 TRIM41Q8WV44 630 aa25.82■■□□□ 1.72
CCHCR1-202ENST00000396263 PEG3Q9GZU2 1588 aa25.69■■□□□ 1.7
CCHCR1-202ENST00000396263 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
CCHCR1-202ENST00000396263 TRIM26Q12899 539 aaPredicted RBP25.64■■□□□ 1.69
CCHCR1-202ENST00000396263 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.69
CCHCR1-202ENST00000396263 ATAD2BQ9ULI0 1458 aa25.59■■□□□ 1.69
CCHCR1-202ENST00000396263 SMARCA2P51531 1590 aa25.54■■□□□ 1.68
CCHCR1-202ENST00000396263 FAM9AQ8IZU1 332 aaPredicted RBP25.47■■□□□ 1.67
CCHCR1-202ENST00000396263 CCDC88BA6NC98 1476 aa25.44■■□□□ 1.66
CCHCR1-202ENST00000396263 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
CCHCR1-202ENST00000396263 PPARGC1BQ86YN6 1023 aaKnown RBP25.39■■□□□ 1.65
CCHCR1-202ENST00000396263 NCAPD3P42695 1498 aa25.32■■□□□ 1.64
CCHCR1-202ENST00000396263 HMGXB3Q12766 1538 aa25.31■■□□□ 1.64
CCHCR1-202ENST00000396263 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
CCHCR1-202ENST00000396263 ABCC8Q09428 1581 aa25.13■■□□□ 1.61
CCHCR1-202ENST00000396263 EHMT2Q96KQ7 1210 aa25.13■■□□□ 1.61
CCHCR1-202ENST00000396263 ZEB1P37275 1124 aaPredicted RBP25.13■■□□□ 1.61
CCHCR1-202ENST00000396263 PELP1Q8IZL8 1130 aaKnown RBP25■■□□□ 1.59
CCHCR1-202ENST00000396263 EEA1Q15075 1411 aa24.92■■□□□ 1.58
CCHCR1-202ENST00000396263 SOGA1O94964 1423 aa24.88■■□□□ 1.57
CCHCR1-202ENST00000396263 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
CCHCR1-202ENST00000396263 TNIKQ9UKE5 1360 aa24.82■■□□□ 1.56
CCHCR1-202ENST00000396263 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
CCHCR1-202ENST00000396263 CFTRP13569 1480 aa24.79■■□□□ 1.56
CCHCR1-202ENST00000396263 CSRNP3Q8WYN3 585 aa24.76■■□□□ 1.55
CCHCR1-202ENST00000396263 RUSC2Q8N2Y8 1516 aa24.75■■□□□ 1.55
CCHCR1-202ENST00000396263 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
CCHCR1-202ENST00000396263 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
CCHCR1-202ENST00000396263 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
CCHCR1-202ENST00000396263 GOLGA3Q08378 1498 aa24.68■■□□□ 1.54
CCHCR1-202ENST00000396263 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
CCHCR1-202ENST00000396263 KIF21BO75037 1637 aa24.59■■□□□ 1.53
CCHCR1-202ENST00000396263 UBTFP17480 764 aaKnown RBP24.57■■□□□ 1.52
CCHCR1-202ENST00000396263 SCAF1Q9H7N4 1312 aaKnown RBP24.57■■□□□ 1.52
CCHCR1-202ENST00000396263 CEP164Q9UPV0 1460 aa24.56■■□□□ 1.52
CCHCR1-202ENST00000396263 NESP48681 1621 aa24.55■■□□□ 1.52
CCHCR1-202ENST00000396263 TOP2BQ02880 1626 aa24.55■■□□□ 1.52
CCHCR1-202ENST00000396263 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
CCHCR1-202ENST00000396263 CUX1P39880 1505 aa24.5■■□□□ 1.51
CCHCR1-202ENST00000396263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
CCHCR1-202ENST00000396263 LAMC3Q9Y6N6 1575 aa24.47■■□□□ 1.51
CCHCR1-202ENST00000396263 CCER1Q8TC90 406 aaPredicted RBP24.47■■□□□ 1.51
CCHCR1-202ENST00000396263 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
CCHCR1-202ENST00000396263 TTBK1Q5TCY1 1321 aaPredicted RBP24.35■■□□□ 1.49
CCHCR1-202ENST00000396263 CLIP1P30622 1438 aa24.35■■□□□ 1.49
CCHCR1-202ENST00000396263 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
CCHCR1-202ENST00000396263 VPS8Q8N3P4 1428 aa24.28■■□□□ 1.48
CCHCR1-202ENST00000396263 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
CCHCR1-202ENST00000396263 PDS5BQ9NTI5 1447 aa24.24■■□□□ 1.47
CCHCR1-202ENST00000396263 DNMBPQ6XZF7 1577 aa24.23■■□□□ 1.47
CCHCR1-202ENST00000396263 FGD5Q6ZNL6 1462 aa24.21■■□□□ 1.47
CCHCR1-202ENST00000396263 ERICH3Q5RHP9 1530 aa24.21■■□□□ 1.47
CCHCR1-202ENST00000396263 TOPBP1Q92547 1522 aa24.2■■□□□ 1.46
CCHCR1-202ENST00000396263 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
CCHCR1-202ENST00000396263 PRXQ9BXM0 1461 aa24.16■■□□□ 1.46
CCHCR1-202ENST00000396263 POLA1P09884 1462 aaPredicted RBP24.09■■□□□ 1.45
CCHCR1-202ENST00000396263 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
CCHCR1-202ENST00000396263 APLP2Q06481 763 aa24.05■■□□□ 1.44
CCHCR1-202ENST00000396263 CUX2O14529 1486 aa24.05■■□□□ 1.44
CCHCR1-202ENST00000396263 RAD54L2Q9Y4B4 1467 aa24.04■■□□□ 1.44
CCHCR1-202ENST00000396263 MYT1Q01538 1121 aa24.01■■□□□ 1.43
CCHCR1-202ENST00000396263 DIEXFQ68CQ4 756 aaKnown RBP24■■□□□ 1.43
CCHCR1-202ENST00000396263 ARAP1Q96P48 1450 aa23.99■■□□□ 1.43
CCHCR1-202ENST00000396263 MRC2Q9UBG0 1479 aa23.97■■□□□ 1.43
CCHCR1-202ENST00000396263 ABCA10Q8WWZ4 1543 aa23.96■■□□□ 1.43
CCHCR1-202ENST00000396263 HNRNPUL2Q1KMD3 747 aaKnown RBP23.95■■□□□ 1.43
CCHCR1-202ENST00000396263 WDR97A6NE52 1622 aa23.95■■□□□ 1.42
CCHCR1-202ENST00000396263 RANGAP1P46060 587 aaPredicted RBP23.92■■□□□ 1.42
CCHCR1-202ENST00000396263 ERCC6Q03468 1493 aa23.88■■□□□ 1.41
CCHCR1-202ENST00000396263 IGF1RP08069 1367 aa23.88■■□□□ 1.41
CCHCR1-202ENST00000396263 ACIN1Q9UKV3 1341 aaKnown RBP23.87■■□□□ 1.41
CCHCR1-202ENST00000396263 ZNF316A6NFI3 1004 aaPredicted RBP23.87■■□□□ 1.41
CCHCR1-202ENST00000396263 WDR62O43379 1518 aa23.87■■□□□ 1.41
CCHCR1-202ENST00000396263 TARBP1Q13395 1621 aaKnown RBP23.85■■□□□ 1.41
CCHCR1-202ENST00000396263 NEUROD1Q13562 356 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms