RNA–Protein interactions for RNA: ENST00000313669.11

COL26A1-201, Transcript of collagen type XXVI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL26A1, Length 3,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1-201ENST00000313669 NISCHQ9Y2I1 1504 aa33.61■■■□□ 2.97
COL26A1-201ENST00000313669 SHROOM4Q9ULL8 1493 aa29.28■■■□□ 2.28
COL26A1-201ENST00000313669 DCAF8L2P0C7V8 631 aa28.91■■■□□ 2.22
COL26A1-201ENST00000313669 SUPT5HO00267 1087 aaKnown RBP28.49■■■□□ 2.15
COL26A1-201ENST00000313669 CCDC180Q9P1Z9 1646 aa28.34■■■□□ 2.13
COL26A1-201ENST00000313669 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
COL26A1-201ENST00000313669 ABCC9O60706 1549 aa27.39■■□□□ 1.98
COL26A1-201ENST00000313669 SCRIBQ14160 1630 aa27.18■■□□□ 1.94
COL26A1-201ENST00000313669 CHIC1Q5VXU3 224 aa27.18■■□□□ 1.94
COL26A1-201ENST00000313669 DCAF1Q9Y4B6 1507 aa27.15■■□□□ 1.94
COL26A1-201ENST00000313669 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
COL26A1-201ENST00000313669 LOC105371045A0A1W2PR82 267 aa26.72■■□□□ 1.87
COL26A1-201ENST00000313669 EHMT2Q96KQ7 1210 aa26.64■■□□□ 1.86
COL26A1-201ENST00000313669 RSF1Q96T23 1441 aaPredicted RBP26.63■■□□□ 1.85
COL26A1-201ENST00000313669 CECR2Q9BXF3 1484 aa26.6■■□□□ 1.85
COL26A1-201ENST00000313669 FAM9AQ8IZU1 332 aaPredicted RBP26.5■■□□□ 1.83
COL26A1-201ENST00000313669 NACADO15069 1562 aa26.42■■□□□ 1.82
COL26A1-201ENST00000313669 RB1CC1Q8TDY2 1594 aa26.4■■□□□ 1.82
COL26A1-201ENST00000313669 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
COL26A1-201ENST00000313669 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.81
COL26A1-201ENST00000313669 PCGF6Q9BYE7 350 aa26.28■■□□□ 1.8
COL26A1-201ENST00000313669 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
COL26A1-201ENST00000313669 WIZO95785 1651 aa26.18■■□□□ 1.78
COL26A1-201ENST00000313669 UNC13AQ9UPW8 1703 aa25.87■■□□□ 1.73
COL26A1-201ENST00000313669 PPARGC1BQ86YN6 1023 aaKnown RBP25.85■■□□□ 1.73
COL26A1-201ENST00000313669 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
COL26A1-201ENST00000313669 HRCP23327 699 aa25.72■■□□□ 1.71
COL26A1-201ENST00000313669 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
COL26A1-201ENST00000313669 ABCC8Q09428 1581 aa25.64■■□□□ 1.7
COL26A1-201ENST00000313669 BICRAQ9NZM4 1560 aa25.62■■□□□ 1.69
COL26A1-201ENST00000313669 CCDC88BA6NC98 1476 aa25.61■■□□□ 1.69
COL26A1-201ENST00000313669 TTBK1Q5TCY1 1321 aaPredicted RBP25.61■■□□□ 1.69
COL26A1-201ENST00000313669 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
COL26A1-201ENST00000313669 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
COL26A1-201ENST00000313669 TRIM26Q12899 539 aaPredicted RBP25.42■■□□□ 1.66
COL26A1-201ENST00000313669 EIF4G1Q04637 1599 aaKnown RBP25.35■■□□□ 1.65
COL26A1-201ENST00000313669 SOGA1O94964 1423 aa25.34■■□□□ 1.65
COL26A1-201ENST00000313669 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
COL26A1-201ENST00000313669 RANGAP1P46060 587 aaPredicted RBP25.28■■□□□ 1.64
COL26A1-201ENST00000313669 UBTFP17480 764 aaKnown RBP25.18■■□□□ 1.62
COL26A1-201ENST00000313669 ATAD2BQ9ULI0 1458 aa25.18■■□□□ 1.62
COL26A1-201ENST00000313669 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
COL26A1-201ENST00000313669 CSRNP3Q8WYN3 585 aa25.04■■□□□ 1.6
COL26A1-201ENST00000313669 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
COL26A1-201ENST00000313669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.94■■□□□ 1.58
COL26A1-201ENST00000313669 SYNJ1O43426 1573 aa24.94■■□□□ 1.58
COL26A1-201ENST00000313669 CEP162Q5TB80 1403 aa24.91■■□□□ 1.58
COL26A1-201ENST00000313669 PEG3Q9GZU2 1588 aa24.89■■□□□ 1.58
COL26A1-201ENST00000313669 TNIKQ9UKE5 1360 aa24.7■■□□□ 1.54
COL26A1-201ENST00000313669 CCER1Q8TC90 406 aaPredicted RBP24.67■■□□□ 1.54
COL26A1-201ENST00000313669 RAPGEF2Q9Y4G8 1499 aa24.65■■□□□ 1.54
COL26A1-201ENST00000313669 GOLGA3Q08378 1498 aa24.64■■□□□ 1.54
COL26A1-201ENST00000313669 PELP1Q8IZL8 1130 aaKnown RBP24.59■■□□□ 1.53
COL26A1-201ENST00000313669 NCAPD3P42695 1498 aa24.58■■□□□ 1.53
COL26A1-201ENST00000313669 HNRNPUL2Q1KMD3 747 aaKnown RBP24.58■■□□□ 1.52
COL26A1-201ENST00000313669 EEA1Q15075 1411 aa24.56■■□□□ 1.52
COL26A1-201ENST00000313669 DNAJC5BQ9UF47 199 aa24.54■■□□□ 1.52
COL26A1-201ENST00000313669 CLIP1P30622 1438 aa24.52■■□□□ 1.52
COL26A1-201ENST00000313669 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
COL26A1-201ENST00000313669 SCAF1Q9H7N4 1312 aaKnown RBP24.49■■□□□ 1.51
COL26A1-201ENST00000313669 CUX1P39880 1505 aa24.48■■□□□ 1.51
COL26A1-201ENST00000313669 ZEB1P37275 1124 aaPredicted RBP24.43■■□□□ 1.5
COL26A1-201ENST00000313669 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
COL26A1-201ENST00000313669 HMGXB3Q12766 1538 aa24.42■■□□□ 1.5
COL26A1-201ENST00000313669 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
COL26A1-201ENST00000313669 CFTRP13569 1480 aa24.36■■□□□ 1.49
COL26A1-201ENST00000313669 APLP2Q06481 763 aa24.35■■□□□ 1.49
COL26A1-201ENST00000313669 KIF21BO75037 1637 aa24.31■■□□□ 1.48
COL26A1-201ENST00000313669 NESP48681 1621 aa24.31■■□□□ 1.48
COL26A1-201ENST00000313669 P3H3Q8IVL6 736 aa24.29■■□□□ 1.48
COL26A1-201ENST00000313669 KANK4Q5T7N3 995 aaPredicted RBP24.27■■□□□ 1.47
COL26A1-201ENST00000313669 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
COL26A1-201ENST00000313669 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
COL26A1-201ENST00000313669 CUX2O14529 1486 aa24.24■■□□□ 1.47
COL26A1-201ENST00000313669 VPS8Q8N3P4 1428 aa24.23■■□□□ 1.47
COL26A1-201ENST00000313669 KIF27Q86VH2 1401 aa24.21■■□□□ 1.47
COL26A1-201ENST00000313669 ITGAEP38570 1179 aa24.21■■□□□ 1.47
COL26A1-201ENST00000313669 ATP1B4Q9UN42 357 aaPredicted RBP24.19■■□□□ 1.46
COL26A1-201ENST00000313669 PRXQ9BXM0 1461 aa24.18■■□□□ 1.46
COL26A1-201ENST00000313669 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.45
COL26A1-201ENST00000313669 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
COL26A1-201ENST00000313669 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
COL26A1-201ENST00000313669 IGF1RP08069 1367 aa24.09■■□□□ 1.45
COL26A1-201ENST00000313669 FANCD2Q9BXW9 1451 aa24.09■■□□□ 1.45
COL26A1-201ENST00000313669 CARMIL1Q5VZK9 1371 aa24.01■■□□□ 1.43
COL26A1-201ENST00000313669 ARHGAP35Q9NRY4 1499 aa23.97■■□□□ 1.43
COL26A1-201ENST00000313669 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.42
COL26A1-201ENST00000313669 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
COL26A1-201ENST00000313669 DIEXFQ68CQ4 756 aaKnown RBP23.89■■□□□ 1.41
COL26A1-201ENST00000313669 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
COL26A1-201ENST00000313669 NEUROD1Q13562 356 aa23.86■■□□□ 1.41
COL26A1-201ENST00000313669 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
COL26A1-201ENST00000313669 ARID3CA6NKF2 412 aa23.81■■□□□ 1.4
COL26A1-201ENST00000313669 FHOD3Q2V2M9 1422 aa23.81■■□□□ 1.4
COL26A1-201ENST00000313669 PRDM2Q13029 1718 aa23.81■■□□□ 1.4
COL26A1-201ENST00000313669 ACIN1Q9UKV3 1341 aaKnown RBP23.78■■□□□ 1.4
COL26A1-201ENST00000313669 GTF3C3Q9Y5Q9 886 aa23.78■■□□□ 1.4
COL26A1-201ENST00000313669 URB2Q14146 1524 aaKnown RBP23.78■■□□□ 1.4
COL26A1-201ENST00000313669 FAM50AQ14320 339 aaKnown RBP23.77■■□□□ 1.4
COL26A1-201ENST00000313669 YTHDC1Q96MU7 727 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms