RNA–Protein interactions for RNA: ENST00000543496.3

TPBG-203, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-203ENST00000543496 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
TPBG-203ENST00000543496 SHROOM4Q9ULL8 1493 aa29.72■■■□□ 2.35
TPBG-203ENST00000543496 SUPT5HO00267 1087 aaKnown RBP29.42■■■□□ 2.3
TPBG-203ENST00000543496 HRCP23327 699 aa28.91■■■□□ 2.22
TPBG-203ENST00000543496 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
TPBG-203ENST00000543496 ZCCHC6Q5VYS8 1495 aaKnown RBP28.77■■■□□ 2.2
TPBG-203ENST00000543496 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
TPBG-203ENST00000543496 PCGF6Q9BYE7 350 aa28.61■■■□□ 2.17
TPBG-203ENST00000543496 CCDC180Q9P1Z9 1646 aa28.4■■■□□ 2.14
TPBG-203ENST00000543496 PPARGC1BQ86YN6 1023 aaKnown RBP28.4■■■□□ 2.14
TPBG-203ENST00000543496 DCAF8L2P0C7V8 631 aa28.36■■■□□ 2.13
TPBG-203ENST00000543496 LOC105371045A0A1W2PR82 267 aa28.07■■■□□ 2.08
TPBG-203ENST00000543496 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
TPBG-203ENST00000543496 TRIM26Q12899 539 aaPredicted RBP27.78■■■□□ 2.04
TPBG-203ENST00000543496 PELP1Q8IZL8 1130 aaKnown RBP27.64■■■□□ 2.01
TPBG-203ENST00000543496 ZEB1P37275 1124 aaPredicted RBP27.36■■□□□ 1.97
TPBG-203ENST00000543496 ABCC9O60706 1549 aa27.27■■□□□ 1.96
TPBG-203ENST00000543496 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
TPBG-203ENST00000543496 FAM9AQ8IZU1 332 aaPredicted RBP27.23■■□□□ 1.95
TPBG-203ENST00000543496 RSF1Q96T23 1441 aaPredicted RBP27.13■■□□□ 1.93
TPBG-203ENST00000543496 EHMT2Q96KQ7 1210 aa27.13■■□□□ 1.93
TPBG-203ENST00000543496 SCAF1Q9H7N4 1312 aaKnown RBP27.1■■□□□ 1.93
TPBG-203ENST00000543496 SCRIBQ14160 1630 aa27■■□□□ 1.91
TPBG-203ENST00000543496 RB1CC1Q8TDY2 1594 aa26.99■■□□□ 1.91
TPBG-203ENST00000543496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.7■■□□□ 1.86
TPBG-203ENST00000543496 CCER1Q8TC90 406 aaPredicted RBP26.63■■□□□ 1.85
TPBG-203ENST00000543496 MYT1Q01538 1121 aa26.59■■□□□ 1.85
TPBG-203ENST00000543496 ACIN1Q9UKV3 1341 aaKnown RBP26.58■■□□□ 1.85
TPBG-203ENST00000543496 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
TPBG-203ENST00000543496 NEUROD1Q13562 356 aa26.55■■□□□ 1.84
TPBG-203ENST00000543496 MROH2BQ7Z745 1585 aa26.48■■□□□ 1.83
TPBG-203ENST00000543496 DIEXFQ68CQ4 756 aaKnown RBP26.41■■□□□ 1.82
TPBG-203ENST00000543496 WIZO95785 1651 aa26.4■■□□□ 1.82
TPBG-203ENST00000543496 TTBK1Q5TCY1 1321 aaPredicted RBP26.39■■□□□ 1.82
TPBG-203ENST00000543496 GTF3C3Q9Y5Q9 886 aa26.36■■□□□ 1.81
TPBG-203ENST00000543496 CENPBP07199 599 aaPredicted RBP26.32■■□□□ 1.8
TPBG-203ENST00000543496 NACADO15069 1562 aa26.16■■□□□ 1.78
TPBG-203ENST00000543496 BAZ1AQ9NRL2 1556 aaPredicted RBP26.15■■□□□ 1.78
TPBG-203ENST00000543496 EIF4G1Q04637 1599 aaKnown RBP26.15■■□□□ 1.78
TPBG-203ENST00000543496 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
TPBG-203ENST00000543496 ABCC8Q09428 1581 aa26.09■■□□□ 1.77
TPBG-203ENST00000543496 CEP162Q5TB80 1403 aa26.08■■□□□ 1.77
TPBG-203ENST00000543496 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
TPBG-203ENST00000543496 ZNF316A6NFI3 1004 aaPredicted RBP26.01■■□□□ 1.75
TPBG-203ENST00000543496 YTHDC1Q96MU7 727 aaKnown RBP25.98■■□□□ 1.75
TPBG-203ENST00000543496 SOGA1O94964 1423 aa25.96■■□□□ 1.75
TPBG-203ENST00000543496 UBTFP17480 764 aaKnown RBP25.92■■□□□ 1.74
TPBG-203ENST00000543496 TNIKQ9UKE5 1360 aa25.92■■□□□ 1.74
TPBG-203ENST00000543496 TOP2AP11388 1531 aaKnown RBP25.86■■□□□ 1.73
TPBG-203ENST00000543496 CSRNP3Q8WYN3 585 aa25.84■■□□□ 1.73
TPBG-203ENST00000543496 RUSC2Q8N2Y8 1516 aa25.82■■□□□ 1.72
TPBG-203ENST00000543496 MIER1Q8N108 512 aa25.79■■□□□ 1.72
TPBG-203ENST00000543496 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
TPBG-203ENST00000543496 HNRNPUL2Q1KMD3 747 aaKnown RBP25.76■■□□□ 1.71
TPBG-203ENST00000543496 EEA1Q15075 1411 aa25.71■■□□□ 1.71
TPBG-203ENST00000543496 SMARCA4P51532 1647 aa25.7■■□□□ 1.71
TPBG-203ENST00000543496 GOLGA3Q08378 1498 aa25.68■■□□□ 1.7
TPBG-203ENST00000543496 CLIP1P30622 1438 aa25.47■■□□□ 1.67
TPBG-203ENST00000543496 CEP164Q9UPV0 1460 aa25.45■■□□□ 1.66
TPBG-203ENST00000543496 APLP2Q06481 763 aa25.44■■□□□ 1.66
TPBG-203ENST00000543496 RANGAP1P46060 587 aaPredicted RBP25.43■■□□□ 1.66
TPBG-203ENST00000543496 VPS8Q8N3P4 1428 aa25.39■■□□□ 1.65
TPBG-203ENST00000543496 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
TPBG-203ENST00000543496 KIF21BO75037 1637 aa25.37■■□□□ 1.65
TPBG-203ENST00000543496 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
TPBG-203ENST00000543496 RAPGEF2Q9Y4G8 1499 aa25.26■■□□□ 1.63
TPBG-203ENST00000543496 BCL11AQ9H165 835 aa25.24■■□□□ 1.63
TPBG-203ENST00000543496 PABPN1Q86U42 306 aaKnown RBP eCLIP25.23■■□□□ 1.63
TPBG-203ENST00000543496 BAZ1BQ9UIG0 1483 aaKnown RBP25.2■■□□□ 1.62
TPBG-203ENST00000543496 SUPT16HQ9Y5B9 1047 aaKnown RBP25.19■■□□□ 1.62
TPBG-203ENST00000543496 DHX57Q6P158 1386 aaKnown RBP25.17■■□□□ 1.62
TPBG-203ENST00000543496 CLSPNQ9HAW4 1339 aa25.12■■□□□ 1.61
TPBG-203ENST00000543496 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
TPBG-203ENST00000543496 KANK4Q5T7N3 995 aaPredicted RBP25.03■■□□□ 1.6
TPBG-203ENST00000543496 BICRAQ9NZM4 1560 aa24.99■■□□□ 1.59
TPBG-203ENST00000543496 ARAP1Q96P48 1450 aa24.95■■□□□ 1.58
TPBG-203ENST00000543496 TSHZ2Q9NRE2 1034 aa24.95■■□□□ 1.58
TPBG-203ENST00000543496 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
TPBG-203ENST00000543496 ITGAEP38570 1179 aa24.9■■□□□ 1.58
TPBG-203ENST00000543496 TOP2BQ02880 1626 aa24.89■■□□□ 1.58
TPBG-203ENST00000543496 KCNH8Q96L42 1107 aa24.89■■□□□ 1.57
TPBG-203ENST00000543496 ANP32EQ9BTT0 268 aa24.85■■□□□ 1.57
TPBG-203ENST00000543496 RRBP1Q9P2E9 1410 aaKnown RBP24.85■■□□□ 1.57
TPBG-203ENST00000543496 PRXQ9BXM0 1461 aa24.83■■□□□ 1.57
TPBG-203ENST00000543496 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
TPBG-203ENST00000543496 BCANQ96GW7 911 aa24.79■■□□□ 1.56
TPBG-203ENST00000543496 CCNB3Q8WWL7 1395 aa24.79■■□□□ 1.56
TPBG-203ENST00000543496 BIVM-ERCC5R4GMW8 1640 aa24.75■■□□□ 1.55
TPBG-203ENST00000543496 CUX2O14529 1486 aa24.75■■□□□ 1.55
TPBG-203ENST00000543496 RAB3GAP2Q9H2M9 1393 aa24.69■■□□□ 1.54
TPBG-203ENST00000543496 FKBP8Q14318 412 aa24.67■■□□□ 1.54
TPBG-203ENST00000543496 DDX10Q13206 875 aaKnown RBP24.66■■□□□ 1.54
TPBG-203ENST00000543496 MAPKBP1O60336 1514 aa24.64■■□□□ 1.53
TPBG-203ENST00000543496 ARHGAP35Q9NRY4 1499 aa24.64■■□□□ 1.53
TPBG-203ENST00000543496 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
TPBG-203ENST00000543496 CUX1P39880 1505 aa24.58■■□□□ 1.53
TPBG-203ENST00000543496 SIN3AQ96ST3 1273 aa24.58■■□□□ 1.53
TPBG-203ENST00000543496 PRKCSHP14314 528 aaPredicted RBP24.56■■□□□ 1.52
TPBG-203ENST00000543496 WDR97A6NE52 1622 aa24.55■■□□□ 1.52
TPBG-203ENST00000543496 SETD5Q9C0A6 1442 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms