RNA–Protein interactions for RNA: ENST00000431702.2

PGK1P2-201, Transcript of phosphoglycerate kinase 1, pseudogene 2, humanhuman

BASIC

Gene PGK1P2, Length 1,214 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P2-201ENST00000431702 NISCHQ9Y2I1 1504 aa32.6■■■□□ 2.81
PGK1P2-201ENST00000431702 CCDC180Q9P1Z9 1646 aa28.87■■■□□ 2.21
PGK1P2-201ENST00000431702 ABCC9O60706 1549 aa28.16■■■□□ 2.1
PGK1P2-201ENST00000431702 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
PGK1P2-201ENST00000431702 NACADO15069 1562 aa27.1■■□□□ 1.93
PGK1P2-201ENST00000431702 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
PGK1P2-201ENST00000431702 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
PGK1P2-201ENST00000431702 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
PGK1P2-201ENST00000431702 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.91
PGK1P2-201ENST00000431702 UNC13AQ9UPW8 1703 aa26.59■■□□□ 1.85
PGK1P2-201ENST00000431702 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
PGK1P2-201ENST00000431702 SCRIBQ14160 1630 aa26.38■■□□□ 1.81
PGK1P2-201ENST00000431702 PABPN1Q86U42 306 aaKnown RBP eCLIP26.35■■□□□ 1.81
PGK1P2-201ENST00000431702 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
PGK1P2-201ENST00000431702 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
PGK1P2-201ENST00000431702 EIF4G1Q04637 1599 aaKnown RBP25.61■■□□□ 1.69
PGK1P2-201ENST00000431702 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
PGK1P2-201ENST00000431702 CECR2Q9BXF3 1484 aa25.46■■□□□ 1.67
PGK1P2-201ENST00000431702 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
PGK1P2-201ENST00000431702 BAZ1AQ9NRL2 1556 aaPredicted RBP25.19■■□□□ 1.62
PGK1P2-201ENST00000431702 MROH2BQ7Z745 1585 aa25.18■■□□□ 1.62
PGK1P2-201ENST00000431702 ATAD2BQ9ULI0 1458 aa25.09■■□□□ 1.61
PGK1P2-201ENST00000431702 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
PGK1P2-201ENST00000431702 PEG3Q9GZU2 1588 aa25.02■■□□□ 1.6
PGK1P2-201ENST00000431702 SMARCA2P51531 1590 aa24.99■■□□□ 1.59
PGK1P2-201ENST00000431702 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
PGK1P2-201ENST00000431702 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
PGK1P2-201ENST00000431702 WIZO95785 1651 aa24.9■■□□□ 1.58
PGK1P2-201ENST00000431702 BAZ1BQ9UIG0 1483 aaKnown RBP24.83■■□□□ 1.56
PGK1P2-201ENST00000431702 TOP2AP11388 1531 aaKnown RBP24.58■■□□□ 1.53
PGK1P2-201ENST00000431702 NESP48681 1621 aa24.46■■□□□ 1.51
PGK1P2-201ENST00000431702 CCDC88BA6NC98 1476 aa24.33■■□□□ 1.49
PGK1P2-201ENST00000431702 SUPT5HO00267 1087 aaKnown RBP24.31■■□□□ 1.48
PGK1P2-201ENST00000431702 LAMC3Q9Y6N6 1575 aa24.31■■□□□ 1.48
PGK1P2-201ENST00000431702 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
PGK1P2-201ENST00000431702 CFTRP13569 1480 aa24.21■■□□□ 1.47
PGK1P2-201ENST00000431702 ERCC6Q03468 1493 aa24.14■■□□□ 1.46
PGK1P2-201ENST00000431702 KIF21AQ7Z4S6 1674 aa24.14■■□□□ 1.45
PGK1P2-201ENST00000431702 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
PGK1P2-201ENST00000431702 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
PGK1P2-201ENST00000431702 FANCD2Q9BXW9 1451 aa24.01■■□□□ 1.43
PGK1P2-201ENST00000431702 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
PGK1P2-201ENST00000431702 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
PGK1P2-201ENST00000431702 MRC2Q9UBG0 1479 aa23.9■■□□□ 1.42
PGK1P2-201ENST00000431702 CUX2O14529 1486 aa23.88■■□□□ 1.41
PGK1P2-201ENST00000431702 WDR62O43379 1518 aa23.85■■□□□ 1.41
PGK1P2-201ENST00000431702 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
PGK1P2-201ENST00000431702 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
PGK1P2-201ENST00000431702 DNMBPQ6XZF7 1577 aa23.64■■□□□ 1.37
PGK1P2-201ENST00000431702 CUX1P39880 1505 aa23.59■■□□□ 1.37
PGK1P2-201ENST00000431702 ABCC8Q09428 1581 aa23.58■■□□□ 1.37
PGK1P2-201ENST00000431702 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
PGK1P2-201ENST00000431702 FGD5Q6ZNL6 1462 aa23.45■■□□□ 1.34
PGK1P2-201ENST00000431702 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
PGK1P2-201ENST00000431702 IFT140Q96RY7 1462 aa23.44■■□□□ 1.34
PGK1P2-201ENST00000431702 SYNJ1O43426 1573 aa23.43■■□□□ 1.34
PGK1P2-201ENST00000431702 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
PGK1P2-201ENST00000431702 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
PGK1P2-201ENST00000431702 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
PGK1P2-201ENST00000431702 BIVM-ERCC5R4GMW8 1640 aa23.39■■□□□ 1.33
PGK1P2-201ENST00000431702 TOP2BQ02880 1626 aa23.37■■□□□ 1.33
PGK1P2-201ENST00000431702 SOGA1O94964 1423 aa23.36■■□□□ 1.33
PGK1P2-201ENST00000431702 WDR97A6NE52 1622 aa23.29■■□□□ 1.32
PGK1P2-201ENST00000431702 AQRO60306 1485 aaKnown RBP eCLIP23.29■■□□□ 1.32
PGK1P2-201ENST00000431702 EIF4G3O43432 1585 aaKnown RBP23.28■■□□□ 1.32
PGK1P2-201ENST00000431702 TDRD9Q8NDG6 1382 aaKnown RBP23.25■■□□□ 1.31
PGK1P2-201ENST00000431702 ABCA10Q8WWZ4 1543 aa23.22■■□□□ 1.31
PGK1P2-201ENST00000431702 ABCA5Q8WWZ7 1642 aa23.14■■□□□ 1.29
PGK1P2-201ENST00000431702 GAPVD1Q14C86 1478 aa23.09■■□□□ 1.29
PGK1P2-201ENST00000431702 DNAJC5Q9H3Z4 198 aa23.06■■□□□ 1.28
PGK1P2-201ENST00000431702 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
PGK1P2-201ENST00000431702 PBRM1Q86U86 1689 aa23.05■■□□□ 1.28
PGK1P2-201ENST00000431702 SNAPC4Q5SXM2 1469 aa23.04■■□□□ 1.28
PGK1P2-201ENST00000431702 CHD1O14646 1710 aa22.98■■□□□ 1.27
PGK1P2-201ENST00000431702 MAGI1Q96QZ7 1491 aaPredicted RBP22.97■■□□□ 1.27
PGK1P2-201ENST00000431702 OSCARQ8IYS5 282 aa22.91■■□□□ 1.26
PGK1P2-201ENST00000431702 ERICH3Q5RHP9 1530 aa22.91■■□□□ 1.26
PGK1P2-201ENST00000431702 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
PGK1P2-201ENST00000431702 SYNJ2O15056 1496 aa22.89■■□□□ 1.25
PGK1P2-201ENST00000431702 ADAMTS12P58397 1594 aa22.89■■□□□ 1.25
PGK1P2-201ENST00000431702 RUSC2Q8N2Y8 1516 aa22.88■■□□□ 1.25
PGK1P2-201ENST00000431702 KIF27Q86VH2 1401 aa22.88■■□□□ 1.25
PGK1P2-201ENST00000431702 IGF1RP08069 1367 aa22.87■■□□□ 1.25
PGK1P2-201ENST00000431702 FBLN2P98095 1184 aa22.86■■□□□ 1.25
PGK1P2-201ENST00000431702 CHIC1Q5VXU3 224 aa22.84■■□□□ 1.25
PGK1P2-201ENST00000431702 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
PGK1P2-201ENST00000431702 FHAD1B1AJZ9 1412 aa22.82■■□□□ 1.24
PGK1P2-201ENST00000431702 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
PGK1P2-201ENST00000431702 CLASP1Q7Z460 1538 aa22.75■■□□□ 1.23
PGK1P2-201ENST00000431702 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
PGK1P2-201ENST00000431702 NUP160Q12769 1436 aa22.71■■□□□ 1.23
PGK1P2-201ENST00000431702 CUL7Q14999 1698 aa22.71■■□□□ 1.23
PGK1P2-201ENST00000431702 CARMIL1Q5VZK9 1371 aa22.68■■□□□ 1.22
PGK1P2-201ENST00000431702 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
PGK1P2-201ENST00000431702 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
PGK1P2-201ENST00000431702 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
PGK1P2-201ENST00000431702 ARHGEF11O15085 1522 aa22.6■■□□□ 1.21
PGK1P2-201ENST00000431702 PRXQ9BXM0 1461 aa22.56■■□□□ 1.2
PGK1P2-201ENST00000431702 RAPGEF2Q9Y4G8 1499 aa22.54■■□□□ 1.2
PGK1P2-201ENST00000431702 SHROOM2Q13796 1616 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms