Protein–RNA interactions for Protein: A6NCL1

GMNC, Geminin coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMNCA6NCL1 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 AC107375.1-201ENST00000564464 2231 ntBASIC14.73□□□□□ -0.05
GMNCA6NCL1 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 HLA-A-201ENST00000376802 1334 ntBASIC14.73□□□□□ -0.05
GMNCA6NCL1 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 AC145285.3-201ENST00000564603 959 ntBASIC14.73□□□□□ -0.05
GMNCA6NCL1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 AC106818.1-201ENST00000623223 3242 ntBASIC14.73□□□□□ -0.05
GMNCA6NCL1 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GMNCA6NCL1 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GMNCA6NCL1 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 RPL13P2-201ENST00000440687 659 ntBASIC14.72□□□□□ -0.05
GMNCA6NCL1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 IGHV3-62-201ENST00000520057 340 ntBASIC14.72□□□□□ -0.05
GMNCA6NCL1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.72□□□□□ -0.05
GMNCA6NCL1 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GMNCA6NCL1 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.71□□□□□ -0.05
GMNCA6NCL1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
GMNCA6NCL1 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GMNCA6NCL1 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GMNCA6NCL1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.71□□□□□ -0.05
GMNCA6NCL1 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GMNCA6NCL1 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GMNCA6NCL1 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GMNCA6NCL1 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GMNCA6NCL1 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GMNCA6NCL1 LINC00567-201ENST00000569854 3409 ntBASIC14.71□□□□□ -0.05
GMNCA6NCL1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms