RNA–Protein interactions for RNA: ENST00000370336.4

DDX43-201, Transcript of DEAD-box helicase 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX43, Length 2,513 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43-201ENST00000370336 NISCHQ9Y2I1 1504 aa30.74■■■□□ 2.51
DDX43-201ENST00000370336 CCDC180Q9P1Z9 1646 aa27.04■■□□□ 1.92
DDX43-201ENST00000370336 ABCC9O60706 1549 aa26.04■■□□□ 1.76
DDX43-201ENST00000370336 ZCCHC6Q5VYS8 1495 aaKnown RBP25.74■■□□□ 1.71
DDX43-201ENST00000370336 DCAF8L2P0C7V8 631 aa25.57■■□□□ 1.68
DDX43-201ENST00000370336 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
DDX43-201ENST00000370336 NACADO15069 1562 aa25.27■■□□□ 1.64
DDX43-201ENST00000370336 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
DDX43-201ENST00000370336 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
DDX43-201ENST00000370336 SCRIBQ14160 1630 aa24.85■■□□□ 1.57
DDX43-201ENST00000370336 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
DDX43-201ENST00000370336 UNC13AQ9UPW8 1703 aa24.74■■□□□ 1.55
DDX43-201ENST00000370336 BICRAQ9NZM4 1560 aa24.47■■□□□ 1.51
DDX43-201ENST00000370336 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
DDX43-201ENST00000370336 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
DDX43-201ENST00000370336 BAZ1AQ9NRL2 1556 aaPredicted RBP23.77■■□□□ 1.4
DDX43-201ENST00000370336 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
DDX43-201ENST00000370336 MROH2BQ7Z745 1585 aa23.76■■□□□ 1.39
DDX43-201ENST00000370336 SMARCA4P51532 1647 aa23.76■■□□□ 1.39
DDX43-201ENST00000370336 RSF1Q96T23 1441 aaPredicted RBP23.66■■□□□ 1.38
DDX43-201ENST00000370336 SUPT5HO00267 1087 aaKnown RBP23.59■■□□□ 1.37
DDX43-201ENST00000370336 WIZO95785 1651 aa23.57■■□□□ 1.36
DDX43-201ENST00000370336 CC2D2AQ9P2K1 1620 aa23.55■■□□□ 1.36
DDX43-201ENST00000370336 ATAD2BQ9ULI0 1458 aa23.46■■□□□ 1.35
DDX43-201ENST00000370336 PEG3Q9GZU2 1588 aa23.45■■□□□ 1.34
DDX43-201ENST00000370336 SMARCA2P51531 1590 aa23.42■■□□□ 1.34
DDX43-201ENST00000370336 DNAJC5BQ9UF47 199 aa23.4■■□□□ 1.34
DDX43-201ENST00000370336 NCAPD3P42695 1498 aa23.32■■□□□ 1.32
DDX43-201ENST00000370336 BAZ1BQ9UIG0 1483 aaKnown RBP23.31■■□□□ 1.32
DDX43-201ENST00000370336 TOP2AP11388 1531 aaKnown RBP23.26■■□□□ 1.31
DDX43-201ENST00000370336 HMGXB3Q12766 1538 aa23.26■■□□□ 1.31
DDX43-201ENST00000370336 PELP1Q8IZL8 1130 aaKnown RBP23.15■■□□□ 1.3
DDX43-201ENST00000370336 CCDC88BA6NC98 1476 aa23.02■■□□□ 1.28
DDX43-201ENST00000370336 NESP48681 1621 aa22.72■■□□□ 1.23
DDX43-201ENST00000370336 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
DDX43-201ENST00000370336 CFTRP13569 1480 aa22.68■■□□□ 1.22
DDX43-201ENST00000370336 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
DDX43-201ENST00000370336 MYT1Q01538 1121 aa22.6■■□□□ 1.21
DDX43-201ENST00000370336 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
DDX43-201ENST00000370336 HRCP23327 699 aa22.5■■□□□ 1.19
DDX43-201ENST00000370336 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
DDX43-201ENST00000370336 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
DDX43-201ENST00000370336 PDS5BQ9NTI5 1447 aa22.44■■□□□ 1.18
DDX43-201ENST00000370336 ABCC8Q09428 1581 aa22.43■■□□□ 1.18
DDX43-201ENST00000370336 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
DDX43-201ENST00000370336 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
DDX43-201ENST00000370336 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
DDX43-201ENST00000370336 WRNQ14191 1432 aaPredicted RBP eCLIP22.28■■□□□ 1.16
DDX43-201ENST00000370336 SYNJ1O43426 1573 aa22.26■■□□□ 1.15
DDX43-201ENST00000370336 CUX1P39880 1505 aa22.25■■□□□ 1.15
DDX43-201ENST00000370336 URB2Q14146 1524 aaKnown RBP22.23■■□□□ 1.15
DDX43-201ENST00000370336 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
DDX43-201ENST00000370336 THOC2Q8NI27 1593 aaKnown RBP22.2■■□□□ 1.14
DDX43-201ENST00000370336 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
DDX43-201ENST00000370336 TOPBP1Q92547 1522 aa22.17■■□□□ 1.14
DDX43-201ENST00000370336 TRIM41Q8WV44 630 aa22.17■■□□□ 1.14
DDX43-201ENST00000370336 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
DDX43-201ENST00000370336 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
DDX43-201ENST00000370336 WDR62O43379 1518 aa22.12■■□□□ 1.13
DDX43-201ENST00000370336 FGD5Q6ZNL6 1462 aa22.07■■□□□ 1.12
DDX43-201ENST00000370336 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
DDX43-201ENST00000370336 RAD54L2Q9Y4B4 1467 aa21.98■■□□□ 1.11
DDX43-201ENST00000370336 CUX2O14529 1486 aa21.96■■□□□ 1.11
DDX43-201ENST00000370336 SOGA1O94964 1423 aa21.93■■□□□ 1.1
DDX43-201ENST00000370336 PCGF6Q9BYE7 350 aa21.9■■□□□ 1.1
DDX43-201ENST00000370336 TARBP1Q13395 1621 aaKnown RBP21.9■■□□□ 1.1
DDX43-201ENST00000370336 WDR97A6NE52 1622 aa21.87■■□□□ 1.09
DDX43-201ENST00000370336 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
DDX43-201ENST00000370336 IFT140Q96RY7 1462 aa21.84■■□□□ 1.09
DDX43-201ENST00000370336 ABCA10Q8WWZ4 1543 aa21.83■■□□□ 1.09
DDX43-201ENST00000370336 FAM9AQ8IZU1 332 aaPredicted RBP21.81■■□□□ 1.08
DDX43-201ENST00000370336 PPARGC1BQ86YN6 1023 aaKnown RBP21.8■■□□□ 1.08
DDX43-201ENST00000370336 ZNF608Q9ULD9 1512 aaPredicted RBP21.8■■□□□ 1.08
DDX43-201ENST00000370336 TDRD9Q8NDG6 1382 aaKnown RBP21.79■■□□□ 1.08
DDX43-201ENST00000370336 AQRO60306 1485 aaKnown RBP eCLIP21.74■■□□□ 1.07
DDX43-201ENST00000370336 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
DDX43-201ENST00000370336 ABCA5Q8WWZ7 1642 aa21.74■■□□□ 1.07
DDX43-201ENST00000370336 EIF4G3O43432 1585 aaKnown RBP21.72■■□□□ 1.07
DDX43-201ENST00000370336 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
DDX43-201ENST00000370336 PBRM1Q86U86 1689 aa21.66■■□□□ 1.06
DDX43-201ENST00000370336 EEA1Q15075 1411 aa21.65■■□□□ 1.06
DDX43-201ENST00000370336 CSRNP3Q8WYN3 585 aa21.61■■□□□ 1.05
DDX43-201ENST00000370336 IGF1RP08069 1367 aa21.6■■□□□ 1.05
DDX43-201ENST00000370336 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
DDX43-201ENST00000370336 GRIN2BQ13224 1484 aa21.58■■□□□ 1.05
DDX43-201ENST00000370336 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
DDX43-201ENST00000370336 EHMT2Q96KQ7 1210 aa21.57■■□□□ 1.04
DDX43-201ENST00000370336 SNAPC4Q5SXM2 1469 aa21.53■■□□□ 1.04
DDX43-201ENST00000370336 TTBK1Q5TCY1 1321 aaPredicted RBP21.52■■□□□ 1.03
DDX43-201ENST00000370336 CUL7Q14999 1698 aa21.51■■□□□ 1.03
DDX43-201ENST00000370336 ADAMTS12P58397 1594 aa21.49■■□□□ 1.03
DDX43-201ENST00000370336 CARMIL1Q5VZK9 1371 aa21.49■■□□□ 1.03
DDX43-201ENST00000370336 PRXQ9BXM0 1461 aa21.48■■□□□ 1.03
DDX43-201ENST00000370336 KIF21BO75037 1637 aa21.46■■□□□ 1.03
DDX43-201ENST00000370336 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
DDX43-201ENST00000370336 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.02
DDX43-201ENST00000370336 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.02
DDX43-201ENST00000370336 FHAD1B1AJZ9 1412 aa21.43■■□□□ 1.02
DDX43-201ENST00000370336 SYNJ2O15056 1496 aa21.38■■□□□ 1.01
DDX43-201ENST00000370336 FBLN2P98095 1184 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms