RNA–Protein interactions for RNA: ENST00000434032.6

USP19-207, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene USP19, Length 4,677 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-207ENST00000434032 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
USP19-207ENST00000434032 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
USP19-207ENST00000434032 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
USP19-207ENST00000434032 SHROOM4Q9ULL8 1493 aa23.03■■□□□ 1.28
USP19-207ENST00000434032 EHMT2Q96KQ7 1210 aa22.19■■□□□ 1.14
USP19-207ENST00000434032 PCGF6Q9BYE7 350 aa21.95■■□□□ 1.1
USP19-207ENST00000434032 FAM9AQ8IZU1 332 aaPredicted RBP21.79■■□□□ 1.08
USP19-207ENST00000434032 PELP1Q8IZL8 1130 aaKnown RBP21.51■■□□□ 1.03
USP19-207ENST00000434032 TTBK1Q5TCY1 1321 aaPredicted RBP21.46■■□□□ 1.03
USP19-207ENST00000434032 TRIM41Q8WV44 630 aa21.38■■□□□ 1.01
USP19-207ENST00000434032 MYT1Q01538 1121 aa21.29■■□□□ 1
USP19-207ENST00000434032 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
USP19-207ENST00000434032 LOC105371045A0A1W2PR82 267 aa21.17■□□□□ 0.98
USP19-207ENST00000434032 HRCP23327 699 aa21.16■□□□□ 0.98
USP19-207ENST00000434032 APLP2Q06481 763 aa21.14■□□□□ 0.97
USP19-207ENST00000434032 PPARGC1BQ86YN6 1023 aaKnown RBP21.09■□□□□ 0.97
USP19-207ENST00000434032 ZEB1P37275 1124 aaPredicted RBP21.07■□□□□ 0.96
USP19-207ENST00000434032 CCER1Q8TC90 406 aaPredicted RBP21.07■□□□□ 0.96
USP19-207ENST00000434032 RANGAP1P46060 587 aaPredicted RBP21.03■□□□□ 0.96
USP19-207ENST00000434032 TRIM26Q12899 539 aaPredicted RBP20.98■□□□□ 0.95
USP19-207ENST00000434032 UBTFP17480 764 aaKnown RBP20.88■□□□□ 0.93
USP19-207ENST00000434032 CENPBP07199 599 aaPredicted RBP20.79■□□□□ 0.92
USP19-207ENST00000434032 YTHDC1Q96MU7 727 aaKnown RBP20.65■□□□□ 0.9
USP19-207ENST00000434032 ATP1B4Q9UN42 357 aaPredicted RBP20.51■□□□□ 0.87
USP19-207ENST00000434032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.46■□□□□ 0.87
USP19-207ENST00000434032 HNRNPUL2Q1KMD3 747 aaKnown RBP20.37■□□□□ 0.85
USP19-207ENST00000434032 ITGAEP38570 1179 aa20.25■□□□□ 0.83
USP19-207ENST00000434032 ABCC9O60706 1549 aa20.2■□□□□ 0.82
USP19-207ENST00000434032 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
USP19-207ENST00000434032 DIEXFQ68CQ4 756 aaKnown RBP20.18■□□□□ 0.82
USP19-207ENST00000434032 PABPN1Q86U42 306 aaKnown RBP eCLIP20.05■□□□□ 0.8
USP19-207ENST00000434032 MYO15BQ96JP2 1530 aa20.04■□□□□ 0.8
USP19-207ENST00000434032 NEFLP07196 543 aa20.02■□□□□ 0.8
USP19-207ENST00000434032 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
USP19-207ENST00000434032 DCAF1Q9Y4B6 1507 aa19.91■□□□□ 0.78
USP19-207ENST00000434032 GTF3C3Q9Y5Q9 886 aa19.9■□□□□ 0.78
USP19-207ENST00000434032 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
USP19-207ENST00000434032 CSRNP3Q8WYN3 585 aa19.78■□□□□ 0.76
USP19-207ENST00000434032 ZNF316A6NFI3 1004 aaPredicted RBP19.74■□□□□ 0.75
USP19-207ENST00000434032 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
USP19-207ENST00000434032 CNGB1Q14028 1251 aaPredicted RBP19.71■□□□□ 0.75
USP19-207ENST00000434032 FAM50AQ14320 339 aaKnown RBP19.7■□□□□ 0.74
USP19-207ENST00000434032 POLR3GLQ9BT43 218 aa19.68■□□□□ 0.74
USP19-207ENST00000434032 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
USP19-207ENST00000434032 NEUROD1Q13562 356 aa19.64■□□□□ 0.74
USP19-207ENST00000434032 BCANQ96GW7 911 aa19.55■□□□□ 0.72
USP19-207ENST00000434032 RSF1Q96T23 1441 aaPredicted RBP19.54■□□□□ 0.72
USP19-207ENST00000434032 SCAF1Q9H7N4 1312 aaKnown RBP19.49■□□□□ 0.71
USP19-207ENST00000434032 P3H3Q8IVL6 736 aa19.46■□□□□ 0.71
USP19-207ENST00000434032 TRIM52Q96A61 297 aa19.4■□□□□ 0.7
USP19-207ENST00000434032 MYT1LQ9UL68 1186 aa19.36■□□□□ 0.69
USP19-207ENST00000434032 ANP32CO43423 234 aa19.32■□□□□ 0.68
USP19-207ENST00000434032 MIER1Q8N108 512 aa19.27■□□□□ 0.68
USP19-207ENST00000434032 ARID3CA6NKF2 412 aa19.24■□□□□ 0.67
USP19-207ENST00000434032 CEP162Q5TB80 1403 aa19.22■□□□□ 0.67
USP19-207ENST00000434032 ZNF326Q5BKZ1 582 aaKnown RBP19.21■□□□□ 0.67
USP19-207ENST00000434032 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
USP19-207ENST00000434032 CLIP1P30622 1438 aa19.17■□□□□ 0.66
USP19-207ENST00000434032 DDX10Q13206 875 aaKnown RBP19.17■□□□□ 0.66
USP19-207ENST00000434032 FBLN2P98095 1184 aa19.11■□□□□ 0.65
USP19-207ENST00000434032 FKBP8Q14318 412 aa19.09■□□□□ 0.65
USP19-207ENST00000434032 DAXXQ9UER7 740 aaPredicted RBP19.08■□□□□ 0.64
USP19-207ENST00000434032 RB1CC1Q8TDY2 1594 aa19.07■□□□□ 0.64
USP19-207ENST00000434032 HIRIP3Q9BW71 556 aaPredicted RBP19.05■□□□□ 0.64
USP19-207ENST00000434032 CDK11AQ9UQ88 783 aaPredicted RBP19.03■□□□□ 0.64
USP19-207ENST00000434032 GOLGA3Q08378 1498 aa19.02■□□□□ 0.64
USP19-207ENST00000434032 TNIKQ9UKE5 1360 aa19.02■□□□□ 0.64
USP19-207ENST00000434032 WRNQ14191 1432 aaPredicted RBP eCLIP19.01■□□□□ 0.63
USP19-207ENST00000434032 TONSLQ96HA7 1378 aa19■□□□□ 0.63
USP19-207ENST00000434032 EEA1Q15075 1411 aa18.99■□□□□ 0.63
USP19-207ENST00000434032 SOGA1O94964 1423 aa18.97■□□□□ 0.63
USP19-207ENST00000434032 SLC4A1APQ9BWU0 796 aaKnown RBP18.96■□□□□ 0.63
USP19-207ENST00000434032 HNRNPUQ00839 825 aaKnown RBP eCLIP18.95■□□□□ 0.62
USP19-207ENST00000434032 RTL5Q5HYW3 569 aaPredicted RBP18.94■□□□□ 0.62
USP19-207ENST00000434032 CHIC2Q9UKJ5 165 aa18.94■□□□□ 0.62
USP19-207ENST00000434032 NACADO15069 1562 aa18.93■□□□□ 0.62
USP19-207ENST00000434032 ZNF777Q9ULD5 760 aaPredicted RBP18.92■□□□□ 0.62
USP19-207ENST00000434032 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
USP19-207ENST00000434032 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
USP19-207ENST00000434032 FAM9BQ8IZU0 186 aa18.86■□□□□ 0.61
USP19-207ENST00000434032 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
USP19-207ENST00000434032 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
USP19-207ENST00000434032 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
USP19-207ENST00000434032 CCDC88BA6NC98 1476 aa18.81■□□□□ 0.6
USP19-207ENST00000434032 IRX6P78412 446 aaPredicted RBP18.8■□□□□ 0.6
USP19-207ENST00000434032 MTUS2Q5JR59 1369 aa18.78■□□□□ 0.6
USP19-207ENST00000434032 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
USP19-207ENST00000434032 SIN3AQ96ST3 1273 aa18.75■□□□□ 0.59
USP19-207ENST00000434032 RRP7BPQ9NSQ0 103 aa18.73■□□□□ 0.59
USP19-207ENST00000434032 SALL2Q9Y467 1007 aaPredicted RBP18.71■□□□□ 0.59
USP19-207ENST00000434032 MRS2Q9HD23 443 aa18.69■□□□□ 0.58
USP19-207ENST00000434032 KIF27Q86VH2 1401 aa18.68■□□□□ 0.58
USP19-207ENST00000434032 NPM2Q86SE8 214 aaKnown RBP18.68■□□□□ 0.58
USP19-207ENST00000434032 WIZO95785 1651 aa18.65■□□□□ 0.58
USP19-207ENST00000434032 KANK4Q5T7N3 995 aaPredicted RBP18.65■□□□□ 0.58
USP19-207ENST00000434032 ANP32AP39687 249 aaKnown RBP18.63■□□□□ 0.57
USP19-207ENST00000434032 SENP3-EIF4A1A0A087X0R7 540 aa18.62■□□□□ 0.57
USP19-207ENST00000434032 VPS8Q8N3P4 1428 aa18.61■□□□□ 0.57
USP19-207ENST00000434032 EIF4G2P78344 907 aaKnown RBP eCLIP18.6■□□□□ 0.57
USP19-207ENST00000434032 CCNB3Q8WWL7 1395 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms