RNA–Protein interactions for RNA: ENST00000392378.6

BDH1-202, Transcript of 3-hydroxybutyrate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDH1, Length 3,455 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDH1-202ENST00000392378 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
BDH1-202ENST00000392378 SHROOM4Q9ULL8 1493 aa23.2■■□□□ 1.31
BDH1-202ENST00000392378 SUPT5HO00267 1087 aaKnown RBP23.06■■□□□ 1.28
BDH1-202ENST00000392378 DCAF8L2P0C7V8 631 aa22.52■■□□□ 1.2
BDH1-202ENST00000392378 PCGF6Q9BYE7 350 aa22.33■■□□□ 1.17
BDH1-202ENST00000392378 HRCP23327 699 aa22.23■■□□□ 1.15
BDH1-202ENST00000392378 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
BDH1-202ENST00000392378 PPARGC1BQ86YN6 1023 aaKnown RBP22.07■■□□□ 1.12
BDH1-202ENST00000392378 MYO15BQ96JP2 1530 aa21.95■■□□□ 1.1
BDH1-202ENST00000392378 LOC105371045A0A1W2PR82 267 aa21.81■■□□□ 1.08
BDH1-202ENST00000392378 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
BDH1-202ENST00000392378 EHMT2Q96KQ7 1210 aa21.61■■□□□ 1.05
BDH1-202ENST00000392378 FAM9AQ8IZU1 332 aaPredicted RBP21.46■■□□□ 1.03
BDH1-202ENST00000392378 TRIM26Q12899 539 aaPredicted RBP21.43■■□□□ 1.02
BDH1-202ENST00000392378 DCAF1Q9Y4B6 1507 aa21.26■□□□□ 0.99
BDH1-202ENST00000392378 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
BDH1-202ENST00000392378 CCDC180Q9P1Z9 1646 aa21.16■□□□□ 0.98
BDH1-202ENST00000392378 ZEB1P37275 1124 aaPredicted RBP21.12■□□□□ 0.97
BDH1-202ENST00000392378 TTBK1Q5TCY1 1321 aaPredicted RBP20.98■□□□□ 0.95
BDH1-202ENST00000392378 PELP1Q8IZL8 1130 aaKnown RBP20.9■□□□□ 0.94
BDH1-202ENST00000392378 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
BDH1-202ENST00000392378 CCER1Q8TC90 406 aaPredicted RBP20.85■□□□□ 0.93
BDH1-202ENST00000392378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.82■□□□□ 0.92
BDH1-202ENST00000392378 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
BDH1-202ENST00000392378 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
BDH1-202ENST00000392378 CENPBP07199 599 aaPredicted RBP20.54■□□□□ 0.88
BDH1-202ENST00000392378 NEUROD1Q13562 356 aa20.53■□□□□ 0.88
BDH1-202ENST00000392378 DIEXFQ68CQ4 756 aaKnown RBP20.52■□□□□ 0.88
BDH1-202ENST00000392378 ACIN1Q9UKV3 1341 aaKnown RBP20.51■□□□□ 0.87
BDH1-202ENST00000392378 YTHDC1Q96MU7 727 aaKnown RBP20.51■□□□□ 0.87
BDH1-202ENST00000392378 GTF3C3Q9Y5Q9 886 aa20.5■□□□□ 0.87
BDH1-202ENST00000392378 ABCC9O60706 1549 aa20.49■□□□□ 0.87
BDH1-202ENST00000392378 RB1CC1Q8TDY2 1594 aa20.48■□□□□ 0.87
BDH1-202ENST00000392378 UBTFP17480 764 aaKnown RBP20.33■□□□□ 0.85
BDH1-202ENST00000392378 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
BDH1-202ENST00000392378 RANGAP1P46060 587 aaPredicted RBP20.23■□□□□ 0.83
BDH1-202ENST00000392378 HNRNPUL2Q1KMD3 747 aaKnown RBP20.21■□□□□ 0.83
BDH1-202ENST00000392378 ZNF316A6NFI3 1004 aaPredicted RBP20.11■□□□□ 0.81
BDH1-202ENST00000392378 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
BDH1-202ENST00000392378 APLP2Q06481 763 aa20.03■□□□□ 0.8
BDH1-202ENST00000392378 WIZO95785 1651 aa19.99■□□□□ 0.79
BDH1-202ENST00000392378 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
BDH1-202ENST00000392378 MIER1Q8N108 512 aa19.97■□□□□ 0.79
BDH1-202ENST00000392378 CSRNP3Q8WYN3 585 aa19.95■□□□□ 0.78
BDH1-202ENST00000392378 MYT1Q01538 1121 aa19.93■□□□□ 0.78
BDH1-202ENST00000392378 ABCC8Q09428 1581 aa19.92■□□□□ 0.78
BDH1-202ENST00000392378 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
BDH1-202ENST00000392378 SOGA1O94964 1423 aa19.88■□□□□ 0.77
BDH1-202ENST00000392378 TNIKQ9UKE5 1360 aa19.76■□□□□ 0.75
BDH1-202ENST00000392378 RUSC2Q8N2Y8 1516 aa19.72■□□□□ 0.75
BDH1-202ENST00000392378 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.753e-7■□□□□ 8.9
BDH1-202ENST00000392378 NACADO15069 1562 aa19.71■□□□□ 0.75
BDH1-202ENST00000392378 WRNQ14191 1432 aaPredicted RBP eCLIP19.7■□□□□ 0.74
BDH1-202ENST00000392378 ITGAEP38570 1179 aa19.69■□□□□ 0.74
BDH1-202ENST00000392378 BAZ1AQ9NRL2 1556 aaPredicted RBP19.66■□□□□ 0.74
BDH1-202ENST00000392378 GOLGA3Q08378 1498 aa19.62■□□□□ 0.73
BDH1-202ENST00000392378 CLIP1P30622 1438 aa19.58■□□□□ 0.73
BDH1-202ENST00000392378 BCANQ96GW7 911 aa19.54■□□□□ 0.72
BDH1-202ENST00000392378 EEA1Q15075 1411 aa19.53■□□□□ 0.72
BDH1-202ENST00000392378 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
BDH1-202ENST00000392378 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
BDH1-202ENST00000392378 SUPT16HQ9Y5B9 1047 aaKnown RBP19.44■□□□□ 0.7
BDH1-202ENST00000392378 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
BDH1-202ENST00000392378 CEP164Q9UPV0 1460 aa19.42■□□□□ 0.7
BDH1-202ENST00000392378 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
BDH1-202ENST00000392378 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
BDH1-202ENST00000392378 ATP1B4Q9UN42 357 aaPredicted RBP19.37■□□□□ 0.69
BDH1-202ENST00000392378 KANK4Q5T7N3 995 aaPredicted RBP19.31■□□□□ 0.68
BDH1-202ENST00000392378 RAPGEF2Q9Y4G8 1499 aa19.3■□□□□ 0.68
BDH1-202ENST00000392378 KCNH8Q96L42 1107 aa19.29■□□□□ 0.68
BDH1-202ENST00000392378 NEFLP07196 543 aa19.26■□□□□ 0.67
BDH1-202ENST00000392378 DDX10Q13206 875 aaKnown RBP19.26■□□□□ 0.67
BDH1-202ENST00000392378 FKBP8Q14318 412 aa19.26■□□□□ 0.67
BDH1-202ENST00000392378 DHX57Q6P158 1386 aaKnown RBP19.24■□□□□ 0.67
BDH1-202ENST00000392378 HIRIP3Q9BW71 556 aaPredicted RBP19.24■□□□□ 0.67
BDH1-202ENST00000392378 TSHZ2Q9NRE2 1034 aa19.23■□□□□ 0.67
BDH1-202ENST00000392378 FAM50AQ14320 339 aaKnown RBP19.21■□□□□ 0.67
BDH1-202ENST00000392378 CLSPNQ9HAW4 1339 aa19.21■□□□□ 0.67
BDH1-202ENST00000392378 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
BDH1-202ENST00000392378 TRIM52Q96A61 297 aa19.16■□□□□ 0.66
BDH1-202ENST00000392378 KIF21BO75037 1637 aa19.12■□□□□ 0.65
BDH1-202ENST00000392378 ANP32EQ9BTT0 268 aa19.12■□□□□ 0.65
BDH1-202ENST00000392378 P3H3Q8IVL6 736 aa19.1■□□□□ 0.65
BDH1-202ENST00000392378 SIN3AQ96ST3 1273 aa19.1■□□□□ 0.65
BDH1-202ENST00000392378 BAZ1BQ9UIG0 1483 aaKnown RBP19.06■□□□□ 0.64
BDH1-202ENST00000392378 CCNB3Q8WWL7 1395 aa19.05■□□□□ 0.64
BDH1-202ENST00000392378 ANP32CO43423 234 aa19.02■□□□□ 0.64
BDH1-202ENST00000392378 ERICH6Q7L0X2 663 aa18.99■□□□□ 0.63
BDH1-202ENST00000392378 RAB3GAP2Q9H2M9 1393 aa18.98■□□□□ 0.63
BDH1-202ENST00000392378 IRX6P78412 446 aaPredicted RBP18.97■□□□□ 0.63
BDH1-202ENST00000392378 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
BDH1-202ENST00000392378 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
BDH1-202ENST00000392378 RBM19Q9Y4C8 960 aaKnown RBP18.89■□□□□ 0.61
BDH1-202ENST00000392378 UNC13AQ9UPW8 1703 aa18.89■□□□□ 0.61
BDH1-202ENST00000392378 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
BDH1-202ENST00000392378 CNGB1Q14028 1251 aaPredicted RBP18.87■□□□□ 0.61
BDH1-202ENST00000392378 BCL11AQ9H165 835 aa18.87■□□□□ 0.61
BDH1-202ENST00000392378 HNRNPUQ00839 825 aaKnown RBP eCLIP18.86■□□□□ 0.61
BDH1-202ENST00000392378 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.6
BDH1-202ENST00000392378 SETD5Q9C0A6 1442 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms