RNA–Protein interactions for RNA: ENST00000353492.4

ATP6V0A4-202, Transcript of ATPase H+ transporting V0 subunit a4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V0A4, Length 2,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4-202ENST00000353492 NISCHQ9Y2I1 1504 aa31.22■■■□□ 2.59
ATP6V0A4-202ENST00000353492 CCDC180Q9P1Z9 1646 aa26.9■■□□□ 1.9
ATP6V0A4-202ENST00000353492 ZCCHC6Q5VYS8 1495 aaKnown RBP26.29■■□□□ 1.8
ATP6V0A4-202ENST00000353492 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
ATP6V0A4-202ENST00000353492 DCAF8L2P0C7V8 631 aa25.93■■□□□ 1.74
ATP6V0A4-202ENST00000353492 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
ATP6V0A4-202ENST00000353492 ABCC9O60706 1549 aa25.36■■□□□ 1.65
ATP6V0A4-202ENST00000353492 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.62
ATP6V0A4-202ENST00000353492 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
ATP6V0A4-202ENST00000353492 SCRIBQ14160 1630 aa25.01■■□□□ 1.59
ATP6V0A4-202ENST00000353492 NACADO15069 1562 aa25.01■■□□□ 1.59
ATP6V0A4-202ENST00000353492 RB1CC1Q8TDY2 1594 aa24.73■■□□□ 1.55
ATP6V0A4-202ENST00000353492 RSF1Q96T23 1441 aaPredicted RBP24.43■■□□□ 1.5
ATP6V0A4-202ENST00000353492 CECR2Q9BXF3 1484 aa24.36■■□□□ 1.49
ATP6V0A4-202ENST00000353492 UNC13AQ9UPW8 1703 aa24.35■■□□□ 1.49
ATP6V0A4-202ENST00000353492 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
ATP6V0A4-202ENST00000353492 MROH2BQ7Z745 1585 aa24.22■■□□□ 1.47
ATP6V0A4-202ENST00000353492 PABPN1Q86U42 306 aaKnown RBP eCLIP24.09■■□□□ 1.45
ATP6V0A4-202ENST00000353492 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.45
ATP6V0A4-202ENST00000353492 WIZO95785 1651 aa24.05■■□□□ 1.44
ATP6V0A4-202ENST00000353492 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
ATP6V0A4-202ENST00000353492 SMARCA4P51532 1647 aa23.91■■□□□ 1.42
ATP6V0A4-202ENST00000353492 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
ATP6V0A4-202ENST00000353492 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
ATP6V0A4-202ENST00000353492 TRIM41Q8WV44 630 aa23.55■■□□□ 1.36
ATP6V0A4-202ENST00000353492 SMARCA2P51531 1590 aa23.54■■□□□ 1.36
ATP6V0A4-202ENST00000353492 PEG3Q9GZU2 1588 aa23.53■■□□□ 1.36
ATP6V0A4-202ENST00000353492 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
ATP6V0A4-202ENST00000353492 LOC105371045A0A1W2PR82 267 aa23.46■■□□□ 1.35
ATP6V0A4-202ENST00000353492 ATAD2BQ9ULI0 1458 aa23.45■■□□□ 1.35
ATP6V0A4-202ENST00000353492 BAZ1BQ9UIG0 1483 aaKnown RBP23.33■■□□□ 1.33
ATP6V0A4-202ENST00000353492 FAM9AQ8IZU1 332 aaPredicted RBP23.28■■□□□ 1.32
ATP6V0A4-202ENST00000353492 ABCC8Q09428 1581 aa23.25■■□□□ 1.31
ATP6V0A4-202ENST00000353492 NCAPD3P42695 1498 aa23.14■■□□□ 1.29
ATP6V0A4-202ENST00000353492 HMGXB3Q12766 1538 aa23.08■■□□□ 1.29
ATP6V0A4-202ENST00000353492 EHMT2Q96KQ7 1210 aa23.05■■□□□ 1.28
ATP6V0A4-202ENST00000353492 WRNQ14191 1432 aaPredicted RBP eCLIP22.95■■□□□ 1.27
ATP6V0A4-202ENST00000353492 SOGA1O94964 1423 aa22.9■■□□□ 1.26
ATP6V0A4-202ENST00000353492 CC2D2AQ9P2K1 1620 aa22.89■■□□□ 1.25
ATP6V0A4-202ENST00000353492 SYNJ1O43426 1573 aa22.88■■□□□ 1.25
ATP6V0A4-202ENST00000353492 RUSC2Q8N2Y8 1516 aa22.83■■□□□ 1.25
ATP6V0A4-202ENST00000353492 CFTRP13569 1480 aa22.75■■□□□ 1.23
ATP6V0A4-202ENST00000353492 PCGF6Q9BYE7 350 aa22.74■■□□□ 1.23
ATP6V0A4-202ENST00000353492 CSRNP3Q8WYN3 585 aa22.72■■□□□ 1.23
ATP6V0A4-202ENST00000353492 EEA1Q15075 1411 aa22.71■■□□□ 1.23
ATP6V0A4-202ENST00000353492 TOP2BQ02880 1626 aa22.68■■□□□ 1.22
ATP6V0A4-202ENST00000353492 BIVM-ERCC5R4GMW8 1640 aa22.63■■□□□ 1.21
ATP6V0A4-202ENST00000353492 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
ATP6V0A4-202ENST00000353492 CUX1P39880 1505 aa22.59■■□□□ 1.21
ATP6V0A4-202ENST00000353492 PRDM2Q13029 1718 aa22.56■■□□□ 1.2
ATP6V0A4-202ENST00000353492 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
ATP6V0A4-202ENST00000353492 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
ATP6V0A4-202ENST00000353492 UBTFP17480 764 aaKnown RBP22.51■■□□□ 1.19
ATP6V0A4-202ENST00000353492 GOLGA3Q08378 1498 aa22.5■■□□□ 1.19
ATP6V0A4-202ENST00000353492 CEP162Q5TB80 1403 aa22.47■■□□□ 1.19
ATP6V0A4-202ENST00000353492 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
ATP6V0A4-202ENST00000353492 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
ATP6V0A4-202ENST00000353492 KIF21BO75037 1637 aa22.44■■□□□ 1.18
ATP6V0A4-202ENST00000353492 NESP48681 1621 aa22.42■■□□□ 1.18
ATP6V0A4-202ENST00000353492 PPARGC1BQ86YN6 1023 aaKnown RBP22.39■■□□□ 1.17
ATP6V0A4-202ENST00000353492 FANCD2Q9BXW9 1451 aa22.38■■□□□ 1.17
ATP6V0A4-202ENST00000353492 RAPGEF2Q9Y4G8 1499 aa22.38■■□□□ 1.17
ATP6V0A4-202ENST00000353492 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
ATP6V0A4-202ENST00000353492 HRCP23327 699 aa22.31■■□□□ 1.16
ATP6V0A4-202ENST00000353492 FGD5Q6ZNL6 1462 aa22.28■■□□□ 1.16
ATP6V0A4-202ENST00000353492 PRXQ9BXM0 1461 aa22.27■■□□□ 1.16
ATP6V0A4-202ENST00000353492 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
ATP6V0A4-202ENST00000353492 CUX2O14529 1486 aa22.22■■□□□ 1.15
ATP6V0A4-202ENST00000353492 CLIP1P30622 1438 aa22.2■■□□□ 1.14
ATP6V0A4-202ENST00000353492 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
ATP6V0A4-202ENST00000353492 RANGAP1P46060 587 aaPredicted RBP22.19■■□□□ 1.14
ATP6V0A4-202ENST00000353492 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
ATP6V0A4-202ENST00000353492 TOPBP1Q92547 1522 aa22.18■■□□□ 1.14
ATP6V0A4-202ENST00000353492 IGF1RP08069 1367 aa22.14■■□□□ 1.13
ATP6V0A4-202ENST00000353492 TTBK1Q5TCY1 1321 aaPredicted RBP22.13■■□□□ 1.13
ATP6V0A4-202ENST00000353492 RAD54L2Q9Y4B4 1467 aa22.12■■□□□ 1.13
ATP6V0A4-202ENST00000353492 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
ATP6V0A4-202ENST00000353492 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
ATP6V0A4-202ENST00000353492 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
ATP6V0A4-202ENST00000353492 KIF21AQ7Z4S6 1674 aa22.06■■□□□ 1.12
ATP6V0A4-202ENST00000353492 ABCA10Q8WWZ4 1543 aa22.03■■□□□ 1.12
ATP6V0A4-202ENST00000353492 VPS8Q8N3P4 1428 aa22.03■■□□□ 1.12
ATP6V0A4-202ENST00000353492 CARMIL1Q5VZK9 1371 aa22.02■■□□□ 1.12
ATP6V0A4-202ENST00000353492 ARAP1Q96P48 1450 aa21.95■■□□□ 1.1
ATP6V0A4-202ENST00000353492 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
ATP6V0A4-202ENST00000353492 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.09
ATP6V0A4-202ENST00000353492 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
ATP6V0A4-202ENST00000353492 APLP2Q06481 763 aa21.85■■□□□ 1.09
ATP6V0A4-202ENST00000353492 ABCA5Q8WWZ7 1642 aa21.82■■□□□ 1.08
ATP6V0A4-202ENST00000353492 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
ATP6V0A4-202ENST00000353492 TARBP1Q13395 1621 aaKnown RBP21.8■■□□□ 1.08
ATP6V0A4-202ENST00000353492 CUL7Q14999 1698 aa21.8■■□□□ 1.08
ATP6V0A4-202ENST00000353492 GAPVD1Q14C86 1478 aa21.8■■□□□ 1.08
ATP6V0A4-202ENST00000353492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
ATP6V0A4-202ENST00000353492 KANK4Q5T7N3 995 aaPredicted RBP21.71■■□□□ 1.07
ATP6V0A4-202ENST00000353492 ZEB1P37275 1124 aaPredicted RBP21.71■■□□□ 1.07
ATP6V0A4-202ENST00000353492 P3H3Q8IVL6 736 aa21.69■■□□□ 1.06
ATP6V0A4-202ENST00000353492 AQRO60306 1485 aaKnown RBP eCLIP21.67■■□□□ 1.06
ATP6V0A4-202ENST00000353492 WDR62O43379 1518 aa21.66■■□□□ 1.06
ATP6V0A4-202ENST00000353492 CTTNBP2Q8WZ74 1663 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms