RNA–Protein interactions for RNA: ENST00000341408.5

VCX-201, Transcript of variable charge X-linked, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX, Length 677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX-201ENST00000341408 NISCHQ9Y2I1 1504 aa36.93■■■■□ 3.5
VCX-201ENST00000341408 ABCC9O60706 1549 aa33.43■■■□□ 2.94
VCX-201ENST00000341408 CCDC180Q9P1Z9 1646 aa32.9■■■□□ 2.86
VCX-201ENST00000341408 DNAJC5BQ9UF47 199 aa31.76■■■□□ 2.67
VCX-201ENST00000341408 RB1CC1Q8TDY2 1594 aa31.6■■■□□ 2.65
VCX-201ENST00000341408 NACADO15069 1562 aa31.26■■■□□ 2.59
VCX-201ENST00000341408 DCAF8L2P0C7V8 631 aa31.23■■■□□ 2.59
VCX-201ENST00000341408 PABPN1Q86U42 306 aaKnown RBP eCLIP31.11■■■□□ 2.57
VCX-201ENST00000341408 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
VCX-201ENST00000341408 UNC13AQ9UPW8 1703 aa30.81■■■□□ 2.52
VCX-201ENST00000341408 MYO15BQ96JP2 1530 aa30.63■■■□□ 2.49
VCX-201ENST00000341408 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
VCX-201ENST00000341408 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
VCX-201ENST00000341408 SHROOM4Q9ULL8 1493 aa30.18■■■□□ 2.42
VCX-201ENST00000341408 CECR2Q9BXF3 1484 aa30.16■■■□□ 2.42
VCX-201ENST00000341408 CC2D2AQ9P2K1 1620 aa30.13■■■□□ 2.41
VCX-201ENST00000341408 SCRIBQ14160 1630 aa30■■■□□ 2.39
VCX-201ENST00000341408 EIF4G1Q04637 1599 aaKnown RBP29.94■■■□□ 2.38
VCX-201ENST00000341408 DNAJC5Q9H3Z4 198 aa29.54■■■□□ 2.32
VCX-201ENST00000341408 CUX2O14529 1486 aa28.97■■■□□ 2.23
VCX-201ENST00000341408 ERCC6Q03468 1493 aa28.94■■■□□ 2.22
VCX-201ENST00000341408 NCAPD3P42695 1498 aa28.87■■■□□ 2.21
VCX-201ENST00000341408 ATAD2BQ9ULI0 1458 aa28.71■■■□□ 2.19
VCX-201ENST00000341408 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
VCX-201ENST00000341408 HMGXB3Q12766 1538 aa28.58■■■□□ 2.17
VCX-201ENST00000341408 NESP48681 1621 aa28.56■■■□□ 2.16
VCX-201ENST00000341408 BAZ1AQ9NRL2 1556 aaPredicted RBP28.56■■■□□ 2.16
VCX-201ENST00000341408 SMARCA4P51532 1647 aa28.55■■■□□ 2.16
VCX-201ENST00000341408 MROH2BQ7Z745 1585 aa28.52■■■□□ 2.16
VCX-201ENST00000341408 BAZ1BQ9UIG0 1483 aaKnown RBP28.44■■■□□ 2.14
VCX-201ENST00000341408 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
VCX-201ENST00000341408 THOC2Q8NI27 1593 aaKnown RBP28.28■■■□□ 2.12
VCX-201ENST00000341408 LAMC3Q9Y6N6 1575 aa28.28■■■□□ 2.12
VCX-201ENST00000341408 WIZO95785 1651 aa28.26■■■□□ 2.11
VCX-201ENST00000341408 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
VCX-201ENST00000341408 PDS5BQ9NTI5 1447 aa28.2■■■□□ 2.11
VCX-201ENST00000341408 KIF21AQ7Z4S6 1674 aa28.14■■■□□ 2.1
VCX-201ENST00000341408 SUPT5HO00267 1087 aaKnown RBP28.13■■■□□ 2.09
VCX-201ENST00000341408 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
VCX-201ENST00000341408 CADPSQ9ULU8 1353 aa28.01■■■□□ 2.07
VCX-201ENST00000341408 MRC2Q9UBG0 1479 aa27.93■■■□□ 2.06
VCX-201ENST00000341408 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
VCX-201ENST00000341408 WDR62O43379 1518 aa27.83■■■□□ 2.05
VCX-201ENST00000341408 CEP164Q9UPV0 1460 aa27.75■■■□□ 2.03
VCX-201ENST00000341408 OSCARQ8IYS5 282 aa27.69■■■□□ 2.02
VCX-201ENST00000341408 FANCD2Q9BXW9 1451 aa27.68■■■□□ 2.02
VCX-201ENST00000341408 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.01
VCX-201ENST00000341408 CFTRP13569 1480 aa27.55■■■□□ 2
VCX-201ENST00000341408 URB2Q14146 1524 aaKnown RBP27.44■■□□□ 1.98
VCX-201ENST00000341408 RIMBP3CA6NJZ7 1639 aa27.24■■□□□ 1.95
VCX-201ENST00000341408 RIMBP3BA6NNM3 1639 aa27.24■■□□□ 1.95
VCX-201ENST00000341408 RIMBP3Q9UFD9 1639 aa27.24■■□□□ 1.95
VCX-201ENST00000341408 IFT140Q96RY7 1462 aa27.21■■□□□ 1.95
VCX-201ENST00000341408 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
VCX-201ENST00000341408 ZNF608Q9ULD9 1512 aaPredicted RBP27.18■■□□□ 1.94
VCX-201ENST00000341408 ARHGEF11O15085 1522 aa27.12■■□□□ 1.93
VCX-201ENST00000341408 CYB5RLQ6IPT4 315 aa27.09■■□□□ 1.93
VCX-201ENST00000341408 TOPBP1Q92547 1522 aa27.08■■□□□ 1.93
VCX-201ENST00000341408 ABCC8Q09428 1581 aa27.04■■□□□ 1.92
VCX-201ENST00000341408 EIF4G3O43432 1585 aaKnown RBP26.98■■□□□ 1.91
VCX-201ENST00000341408 TRHP20396 242 aaPredicted RBP26.98■■□□□ 1.91
VCX-201ENST00000341408 FBLN2P98095 1184 aa26.97■■□□□ 1.91
VCX-201ENST00000341408 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.9
VCX-201ENST00000341408 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
VCX-201ENST00000341408 CHD1O14646 1710 aa26.88■■□□□ 1.89
VCX-201ENST00000341408 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.89
VCX-201ENST00000341408 ARAP1Q96P48 1450 aa26.81■■□□□ 1.88
VCX-201ENST00000341408 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
VCX-201ENST00000341408 TDRD9Q8NDG6 1382 aaKnown RBP26.72■■□□□ 1.87
VCX-201ENST00000341408 SOGA1O94964 1423 aa26.72■■□□□ 1.87
VCX-201ENST00000341408 CUX1P39880 1505 aa26.71■■□□□ 1.87
VCX-201ENST00000341408 RAD54L2Q9Y4B4 1467 aa26.71■■□□□ 1.87
VCX-201ENST00000341408 WRNQ14191 1432 aaPredicted RBP eCLIP26.71■■□□□ 1.87
VCX-201ENST00000341408 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
VCX-201ENST00000341408 SYNJ1O43426 1573 aa26.63■■□□□ 1.85
VCX-201ENST00000341408 SNAPC4Q5SXM2 1469 aa26.61■■□□□ 1.85
VCX-201ENST00000341408 TOP2BQ02880 1626 aa26.56■■□□□ 1.84
VCX-201ENST00000341408 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
VCX-201ENST00000341408 AEBP2Q6ZN18 517 aaPredicted RBP26.55■■□□□ 1.84
VCX-201ENST00000341408 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
VCX-201ENST00000341408 CLASP1Q7Z460 1538 aa26.54■■□□□ 1.84
VCX-201ENST00000341408 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
VCX-201ENST00000341408 MAGI1Q96QZ7 1491 aaPredicted RBP26.52■■□□□ 1.84
VCX-201ENST00000341408 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
VCX-201ENST00000341408 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
VCX-201ENST00000341408 SYNJ2O15056 1496 aa26.45■■□□□ 1.82
VCX-201ENST00000341408 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
VCX-201ENST00000341408 PBRM1Q86U86 1689 aa26.3■■□□□ 1.8
VCX-201ENST00000341408 ABCA10Q8WWZ4 1543 aa26.27■■□□□ 1.8
VCX-201ENST00000341408 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
VCX-201ENST00000341408 GRIN2AQ12879 1464 aa26.13■■□□□ 1.77
VCX-201ENST00000341408 RUSC2Q8N2Y8 1516 aa26.11■■□□□ 1.77
VCX-201ENST00000341408 ERCC6L2Q5T890 1561 aa26.11■■□□□ 1.77
VCX-201ENST00000341408 KIF27Q86VH2 1401 aa26.1■■□□□ 1.77
VCX-201ENST00000341408 CEP170Q5SW79 1584 aa26.06■■□□□ 1.76
VCX-201ENST00000341408 NUP160Q12769 1436 aa26.04■■□□□ 1.76
VCX-201ENST00000341408 FAM9AQ8IZU1 332 aaPredicted RBP26.03■■□□□ 1.76
VCX-201ENST00000341408 ADAMTS12P58397 1594 aa26.01■■□□□ 1.75
VCX-201ENST00000341408 FHAD1B1AJZ9 1412 aa25.99■■□□□ 1.75
VCX-201ENST00000341408 IGF1RP08069 1367 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms