RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 NISCHQ9Y2I1 1504 aa43.08■■■■■ 4.49
SEC23A-206ENST00000553970 CCDC180Q9P1Z9 1646 aa38.77■■■■□ 3.8
SEC23A-206ENST00000553970 ABCC9O60706 1549 aa38.65■■■■□ 3.78
SEC23A-206ENST00000553970 RB1CC1Q8TDY2 1594 aa36.92■■■■□ 3.5
SEC23A-206ENST00000553970 NACADO15069 1562 aa36.67■■■■□ 3.46
SEC23A-206ENST00000553970 DCAF8L2P0C7V8 631 aa36.33■■■■□ 3.41
SEC23A-206ENST00000553970 MYO15BQ96JP2 1530 aa36.19■■■■□ 3.38
SEC23A-206ENST00000553970 DNAJC5BQ9UF47 199 aa36.17■■■■□ 3.38
SEC23A-206ENST00000553970 PABPN1Q86U42 306 aaKnown RBP eCLIP35.93■■■■□ 3.34
SEC23A-206ENST00000553970 UNC13AQ9UPW8 1703 aa35.93■■■■□ 3.34
SEC23A-206ENST00000553970 ZCCHC6Q5VYS8 1495 aaKnown RBP35.71■■■■□ 3.31
SEC23A-206ENST00000553970 BICRAQ9NZM4 1560 aa35.69■■■■□ 3.3
SEC23A-206ENST00000553970 DCAF1Q9Y4B6 1507 aa35.68■■■■□ 3.3
SEC23A-206ENST00000553970 SHROOM4Q9ULL8 1493 aa35.48■■■■□ 3.27
SEC23A-206ENST00000553970 SCRIBQ14160 1630 aa35.19■■■■□ 3.22
SEC23A-206ENST00000553970 CC2D2AQ9P2K1 1620 aa34.95■■■■□ 3.19
SEC23A-206ENST00000553970 CECR2Q9BXF3 1484 aa34.9■■■■□ 3.18
SEC23A-206ENST00000553970 EIF4G1Q04637 1599 aaKnown RBP34.89■■■■□ 3.18
SEC23A-206ENST00000553970 NCAPD3P42695 1498 aa33.81■■■■□ 3
SEC23A-206ENST00000553970 SMARCA2P51531 1590 aa33.66■■■□□ 2.98
SEC23A-206ENST00000553970 ATAD2BQ9ULI0 1458 aa33.66■■■□□ 2.98
SEC23A-206ENST00000553970 SMARCA4P51532 1647 aa33.62■■■□□ 2.97
SEC23A-206ENST00000553970 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
SEC23A-206ENST00000553970 BAZ1AQ9NRL2 1556 aaPredicted RBP33.51■■■□□ 2.96
SEC23A-206ENST00000553970 ERCC6Q03468 1493 aa33.5■■■□□ 2.95
SEC23A-206ENST00000553970 CUX2O14529 1486 aa33.49■■■□□ 2.95
SEC23A-206ENST00000553970 DNAJC5Q9H3Z4 198 aa33.41■■■□□ 2.94
SEC23A-206ENST00000553970 BAZ1BQ9UIG0 1483 aaKnown RBP33.37■■■□□ 2.93
SEC23A-206ENST00000553970 PEG3Q9GZU2 1588 aa33.34■■■□□ 2.93
SEC23A-206ENST00000553970 NESP48681 1621 aa33.14■■■□□ 2.9
SEC23A-206ENST00000553970 MROH2BQ7Z745 1585 aa33.12■■■□□ 2.89
SEC23A-206ENST00000553970 LAMC3Q9Y6N6 1575 aa33.09■■■□□ 2.89
SEC23A-206ENST00000553970 PDS5BQ9NTI5 1447 aa32.93■■■□□ 2.86
SEC23A-206ENST00000553970 THOC2Q8NI27 1593 aaKnown RBP32.9■■■□□ 2.86
SEC23A-206ENST00000553970 KIF21AQ7Z4S6 1674 aa32.78■■■□□ 2.84
SEC23A-206ENST00000553970 CADPSQ9ULU8 1353 aa32.77■■■□□ 2.84
SEC23A-206ENST00000553970 WIZO95785 1651 aa32.72■■■□□ 2.83
SEC23A-206ENST00000553970 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
SEC23A-206ENST00000553970 WDR62O43379 1518 aa32.5■■■□□ 2.79
SEC23A-206ENST00000553970 CEP164Q9UPV0 1460 aa32.47■■■□□ 2.79
SEC23A-206ENST00000553970 RSF1Q96T23 1441 aaPredicted RBP32.45■■■□□ 2.79
SEC23A-206ENST00000553970 TOP2AP11388 1531 aaKnown RBP32.41■■■□□ 2.78
SEC23A-206ENST00000553970 CFTRP13569 1480 aa32.39■■■□□ 2.78
SEC23A-206ENST00000553970 FANCD2Q9BXW9 1451 aa32.39■■■□□ 2.78
SEC23A-206ENST00000553970 PRDM2Q13029 1718 aa32.09■■■□□ 2.73
SEC23A-206ENST00000553970 URB2Q14146 1524 aaKnown RBP32.05■■■□□ 2.72
SEC23A-206ENST00000553970 CCDC88BA6NC98 1476 aa31.97■■■□□ 2.71
SEC23A-206ENST00000553970 OSCARQ8IYS5 282 aa31.91■■■□□ 2.7
SEC23A-206ENST00000553970 TRIM41Q8WV44 630 aa31.89■■■□□ 2.7
SEC23A-206ENST00000553970 ABCC8Q09428 1581 aa31.83■■■□□ 2.69
SEC23A-206ENST00000553970 IFT140Q96RY7 1462 aa31.83■■■□□ 2.69
SEC23A-206ENST00000553970 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
SEC23A-206ENST00000553970 DNMBPQ6XZF7 1577 aa31.67■■■□□ 2.66
SEC23A-206ENST00000553970 ZNF608Q9ULD9 1512 aaPredicted RBP31.64■■■□□ 2.66
SEC23A-206ENST00000553970 EIF4G3O43432 1585 aaKnown RBP31.54■■■□□ 2.64
SEC23A-206ENST00000553970 TARBP1Q13395 1621 aaKnown RBP31.45■■■□□ 2.62
SEC23A-206ENST00000553970 RIMBP3CA6NJZ7 1639 aa31.42■■■□□ 2.62
SEC23A-206ENST00000553970 RIMBP3BA6NNM3 1639 aa31.42■■■□□ 2.62
SEC23A-206ENST00000553970 RIMBP3Q9UFD9 1639 aa31.42■■■□□ 2.62
SEC23A-206ENST00000553970 POLA1P09884 1462 aaPredicted RBP31.42■■■□□ 2.62
SEC23A-206ENST00000553970 AQRO60306 1485 aaKnown RBP eCLIP31.37■■■□□ 2.615e-7■■■■■ 27.6
SEC23A-206ENST00000553970 ARHGEF11O15085 1522 aa31.34■■■□□ 2.61
SEC23A-206ENST00000553970 WDR97A6NE52 1622 aa31.31■■■□□ 2.6
SEC23A-206ENST00000553970 SOGA1O94964 1423 aa31.3■■■□□ 2.6
SEC23A-206ENST00000553970 CHD1O14646 1710 aa31.28■■■□□ 2.6
SEC23A-206ENST00000553970 RAD54L2Q9Y4B4 1467 aa31.23■■■□□ 2.59
SEC23A-206ENST00000553970 FBLN2P98095 1184 aa31.23■■■□□ 2.59
SEC23A-206ENST00000553970 FGD5Q6ZNL6 1462 aa31.21■■■□□ 2.59
SEC23A-206ENST00000553970 TDRD9Q8NDG6 1382 aaKnown RBP31.17■■■□□ 2.58
SEC23A-206ENST00000553970 CUX1P39880 1505 aa31.14■■■□□ 2.58
SEC23A-206ENST00000553970 MAGI1Q96QZ7 1491 aaPredicted RBP31.1■■■□□ 2.57
SEC23A-206ENST00000553970 CYB5RLQ6IPT4 315 aa31.1■■■□□ 2.57
SEC23A-206ENST00000553970 SNAPC4Q5SXM2 1469 aa31.09■■■□□ 2.57
SEC23A-206ENST00000553970 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
SEC23A-206ENST00000553970 CHMP7Q8WUX9 453 aaPredicted RBP31.04■■■□□ 2.56
SEC23A-206ENST00000553970 SYNJ1O43426 1573 aa31.01■■■□□ 2.56
SEC23A-206ENST00000553970 ARAP1Q96P48 1450 aa31■■■□□ 2.55
SEC23A-206ENST00000553970 SYNJ2O15056 1496 aa30.97■■■□□ 2.55
SEC23A-206ENST00000553970 SUPT5HO00267 1087 aaKnown RBP30.96■■■□□ 2.55
SEC23A-206ENST00000553970 CLASP1Q7Z460 1538 aa30.94■■■□□ 2.54
SEC23A-206ENST00000553970 GAPVD1Q14C86 1478 aa30.93■■■□□ 2.54
SEC23A-206ENST00000553970 ABCA10Q8WWZ4 1543 aa30.9■■■□□ 2.54
SEC23A-206ENST00000553970 PBRM1Q86U86 1689 aa30.89■■■□□ 2.54
SEC23A-206ENST00000553970 ABCA5Q8WWZ7 1642 aa30.83■■■□□ 2.53
SEC23A-206ENST00000553970 TRHP20396 242 aaPredicted RBP30.81■■■□□ 2.52
SEC23A-206ENST00000553970 WRNQ14191 1432 aaPredicted RBP eCLIP30.81■■■□□ 2.52
SEC23A-206ENST00000553970 TOP2BQ02880 1626 aa30.7■■■□□ 2.51
SEC23A-206ENST00000553970 BIVM-ERCC5R4GMW8 1640 aa30.69■■■□□ 2.5
SEC23A-206ENST00000553970 GRIN2AQ12879 1464 aa30.64■■■□□ 2.5
SEC23A-206ENST00000553970 ADAMTS12P58397 1594 aa30.6■■■□□ 2.49
SEC23A-206ENST00000553970 FHAD1B1AJZ9 1412 aa30.56■■■□□ 2.48
SEC23A-206ENST00000553970 ERICH3Q5RHP9 1530 aa30.55■■■□□ 2.48
SEC23A-206ENST00000553970 NUP160Q12769 1436 aa30.54■■■□□ 2.48
SEC23A-206ENST00000553970 CEP170Q5SW79 1584 aa30.47■■■□□ 2.47
SEC23A-206ENST00000553970 SHROOM2Q13796 1616 aa30.4■■■□□ 2.46
SEC23A-206ENST00000553970 ERCC6L2Q5T890 1561 aa30.34■■■□□ 2.45
SEC23A-206ENST00000553970 PRG4Q92954 1404 aaPredicted RBP30.23■■■□□ 2.43
SEC23A-206ENST00000553970 JPH4Q96JJ6 628 aa30.22■■■□□ 2.43
SEC23A-206ENST00000553970 RUSC2Q8N2Y8 1516 aa30.17■■■□□ 2.42
SEC23A-206ENST00000553970 KIF27Q86VH2 1401 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms