RNA–Protein interactions for RNA: ENST00000216039.9

JOSD1-201, Transcript of Josephin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene JOSD1, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JOSD1-201ENST00000216039 NISCHQ9Y2I1 1504 aa25.55■■□□□ 1.68
JOSD1-201ENST00000216039 HRCP23327 699 aa22.83■■□□□ 1.24
JOSD1-201ENST00000216039 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
JOSD1-201ENST00000216039 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
JOSD1-201ENST00000216039 PPARGC1BQ86YN6 1023 aaKnown RBP22.63■■□□□ 1.21
JOSD1-201ENST00000216039 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
JOSD1-201ENST00000216039 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
JOSD1-201ENST00000216039 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
JOSD1-201ENST00000216039 LOC105371045A0A1W2PR82 267 aa21.83■■□□□ 1.09
JOSD1-201ENST00000216039 DCAF1Q9Y4B6 1507 aa21.79■■□□□ 1.08
JOSD1-201ENST00000216039 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.08
JOSD1-201ENST00000216039 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
JOSD1-201ENST00000216039 CCDC180Q9P1Z9 1646 aa21.57■■□□□ 1.04
JOSD1-201ENST00000216039 PELP1Q8IZL8 1130 aaKnown RBP21.54■■□□□ 1.04
JOSD1-201ENST00000216039 TRIM26Q12899 539 aaPredicted RBP21.53■■□□□ 1.04
JOSD1-201ENST00000216039 DCAF8L2P0C7V8 631 aa21.15■□□□□ 0.98
JOSD1-201ENST00000216039 NEUROD1Q13562 356 aa21.12■□□□□ 0.97
JOSD1-201ENST00000216039 ZEB1P37275 1124 aaPredicted RBP21.1■□□□□ 0.97
JOSD1-201ENST00000216039 ACIN1Q9UKV3 1341 aaKnown RBP21.01■□□□□ 0.95
JOSD1-201ENST00000216039 GTF3C3Q9Y5Q9 886 aa20.89■□□□□ 0.93
JOSD1-201ENST00000216039 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
JOSD1-201ENST00000216039 FAM9AQ8IZU1 332 aaPredicted RBP20.85■□□□□ 0.93
JOSD1-201ENST00000216039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.8■□□□□ 0.92
JOSD1-201ENST00000216039 ABCC9O60706 1549 aa20.71■□□□□ 0.91
JOSD1-201ENST00000216039 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
JOSD1-201ENST00000216039 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
JOSD1-201ENST00000216039 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
JOSD1-201ENST00000216039 DIEXFQ68CQ4 756 aaKnown RBP20.63■□□□□ 0.89
JOSD1-201ENST00000216039 CCER1Q8TC90 406 aaPredicted RBP20.54■□□□□ 0.88
JOSD1-201ENST00000216039 MYT1Q01538 1121 aa20.52■□□□□ 0.87
JOSD1-201ENST00000216039 CENPBP07199 599 aaPredicted RBP20.44■□□□□ 0.86
JOSD1-201ENST00000216039 YTHDC1Q96MU7 727 aaKnown RBP20.36■□□□□ 0.85
JOSD1-201ENST00000216039 TTBK1Q5TCY1 1321 aaPredicted RBP20.34■□□□□ 0.85
JOSD1-201ENST00000216039 SCRIBQ14160 1630 aa20.31■□□□□ 0.84
JOSD1-201ENST00000216039 MIER1Q8N108 512 aa20.25■□□□□ 0.83
JOSD1-201ENST00000216039 ZNF316A6NFI3 1004 aaPredicted RBP20.2■□□□□ 0.82
JOSD1-201ENST00000216039 CECR2Q9BXF3 1484 aa20.15■□□□□ 0.82
JOSD1-201ENST00000216039 EIF4G1Q04637 1599 aaKnown RBP20.1■□□□□ 0.81
JOSD1-201ENST00000216039 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
JOSD1-201ENST00000216039 WRNQ14191 1432 aaPredicted RBP eCLIP20.07■□□□□ 0.8
JOSD1-201ENST00000216039 WIZO95785 1651 aa20.06■□□□□ 0.8
JOSD1-201ENST00000216039 CEP162Q5TB80 1403 aa20■□□□□ 0.79
JOSD1-201ENST00000216039 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
JOSD1-201ENST00000216039 ABCC8Q09428 1581 aa19.96■□□□□ 0.79
JOSD1-201ENST00000216039 SUPT16HQ9Y5B9 1047 aaKnown RBP19.91■□□□□ 0.78
JOSD1-201ENST00000216039 SOGA1O94964 1423 aa19.9■□□□□ 0.78
JOSD1-201ENST00000216039 RUSC2Q8N2Y8 1516 aa19.87■□□□□ 0.77
JOSD1-201ENST00000216039 TSHZ2Q9NRE2 1034 aa19.85■□□□□ 0.77
JOSD1-201ENST00000216039 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
JOSD1-201ENST00000216039 TNIKQ9UKE5 1360 aa19.77■□□□□ 0.76
JOSD1-201ENST00000216039 BCL11AQ9H165 835 aa19.77■□□□□ 0.76
JOSD1-201ENST00000216039 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.76
JOSD1-201ENST00000216039 NACADO15069 1562 aa19.75■□□□□ 0.75
JOSD1-201ENST00000216039 ANP32EQ9BTT0 268 aa19.73■□□□□ 0.75
JOSD1-201ENST00000216039 CSRNP3Q8WYN3 585 aa19.7■□□□□ 0.74
JOSD1-201ENST00000216039 KCNH8Q96L42 1107 aa19.65■□□□□ 0.74
JOSD1-201ENST00000216039 UBTFP17480 764 aaKnown RBP19.6■□□□□ 0.73
JOSD1-201ENST00000216039 SMARCA2P51531 1590 aa19.54■□□□□ 0.72
JOSD1-201ENST00000216039 GOLGA3Q08378 1498 aa19.49■□□□□ 0.71
JOSD1-201ENST00000216039 DHX57Q6P158 1386 aaKnown RBP19.49■□□□□ 0.71
JOSD1-201ENST00000216039 BCANQ96GW7 911 aa19.48■□□□□ 0.71
JOSD1-201ENST00000216039 TOP2AP11388 1531 aaKnown RBP19.48■□□□□ 0.71
JOSD1-201ENST00000216039 CLIP1P30622 1438 aa19.48■□□□□ 0.71
JOSD1-201ENST00000216039 CLSPNQ9HAW4 1339 aa19.42■□□□□ 0.7
JOSD1-201ENST00000216039 VPS8Q8N3P4 1428 aa19.38■□□□□ 0.69
JOSD1-201ENST00000216039 EEA1Q15075 1411 aa19.38■□□□□ 0.69
JOSD1-201ENST00000216039 MSH5O43196 834 aa19.35■□□□□ 0.69
JOSD1-201ENST00000216039 KIF21BO75037 1637 aa19.32■□□□□ 0.68
JOSD1-201ENST00000216039 RANGAP1P46060 587 aaPredicted RBP19.32■□□□□ 0.68
JOSD1-201ENST00000216039 RBM19Q9Y4C8 960 aaKnown RBP19.32■□□□□ 0.68
JOSD1-201ENST00000216039 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
JOSD1-201ENST00000216039 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
JOSD1-201ENST00000216039 RAPGEF2Q9Y4G8 1499 aa19.31■□□□□ 0.68
JOSD1-201ENST00000216039 FKBP8Q14318 412 aa19.3■□□□□ 0.68
JOSD1-201ENST00000216039 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.68
JOSD1-201ENST00000216039 KANK4Q5T7N3 995 aaPredicted RBP19.26■□□□□ 0.67
JOSD1-201ENST00000216039 ITGAEP38570 1179 aa19.26■□□□□ 0.67
JOSD1-201ENST00000216039 MAPKBP1O60336 1514 aa19.16■□□□□ 0.66
JOSD1-201ENST00000216039 ARAP1Q96P48 1450 aa19.13■□□□□ 0.65
JOSD1-201ENST00000216039 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
JOSD1-201ENST00000216039 CUX2O14529 1486 aa19.09■□□□□ 0.65
JOSD1-201ENST00000216039 DDX10Q13206 875 aaKnown RBP19.08■□□□□ 0.65
JOSD1-201ENST00000216039 TRIM52Q96A61 297 aa19.08■□□□□ 0.65
JOSD1-201ENST00000216039 WDR97A6NE52 1622 aa19.08■□□□□ 0.65
JOSD1-201ENST00000216039 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.64
JOSD1-201ENST00000216039 APLP2Q06481 763 aa19.06■□□□□ 0.64
JOSD1-201ENST00000216039 HIRIP3Q9BW71 556 aaPredicted RBP19.06■□□□□ 0.64
JOSD1-201ENST00000216039 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
JOSD1-201ENST00000216039 PPP1R15AO75807 674 aaPredicted RBP19.04■□□□□ 0.64
JOSD1-201ENST00000216039 SIN3AQ96ST3 1273 aa18.98■□□□□ 0.63
JOSD1-201ENST00000216039 RAB3GAP2Q9H2M9 1393 aa18.98■□□□□ 0.63
JOSD1-201ENST00000216039 PRKCSHP14314 528 aaPredicted RBP18.95■□□□□ 0.62
JOSD1-201ENST00000216039 IRX6P78412 446 aaPredicted RBP18.93■□□□□ 0.62
JOSD1-201ENST00000216039 CCNB3Q8WWL7 1395 aa18.92■□□□□ 0.62
JOSD1-201ENST00000216039 PRXQ9BXM0 1461 aa18.88■□□□□ 0.61
JOSD1-201ENST00000216039 FANCIQ9NVI1 1328 aa18.87■□□□□ 0.61
JOSD1-201ENST00000216039 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
JOSD1-201ENST00000216039 ARHGAP35Q9NRY4 1499 aa18.81■□□□□ 0.6
JOSD1-201ENST00000216039 NEFLP07196 543 aa18.8■□□□□ 0.6
JOSD1-201ENST00000216039 ERICH3Q5RHP9 1530 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms