RNA–Protein interactions for RNA: ENST00000241051.7

DEPDC7-201, Transcript of DEP domain containing 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC7, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-201ENST00000241051 NISCHQ9Y2I1 1504 aa34.32■■■■□ 3.08
DEPDC7-201ENST00000241051 CCDC180Q9P1Z9 1646 aa30.01■■■□□ 2.39
DEPDC7-201ENST00000241051 ZCCHC6Q5VYS8 1495 aaKnown RBP28.76■■■□□ 2.19
DEPDC7-201ENST00000241051 ABCC9O60706 1549 aa28.65■■■□□ 2.18
DEPDC7-201ENST00000241051 DCAF8L2P0C7V8 631 aa28.48■■■□□ 2.15
DEPDC7-201ENST00000241051 DCAF1Q9Y4B6 1507 aa28.38■■■□□ 2.13
DEPDC7-201ENST00000241051 MYO15BQ96JP2 1530 aa28.14■■■□□ 2.1
DEPDC7-201ENST00000241051 NACADO15069 1562 aa28.05■■■□□ 2.08
DEPDC7-201ENST00000241051 RB1CC1Q8TDY2 1594 aa27.87■■■□□ 2.05
DEPDC7-201ENST00000241051 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
DEPDC7-201ENST00000241051 SCRIBQ14160 1630 aa27.57■■■□□ 2
DEPDC7-201ENST00000241051 UNC13AQ9UPW8 1703 aa27.23■■□□□ 1.95
DEPDC7-201ENST00000241051 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
DEPDC7-201ENST00000241051 PABPN1Q86U42 306 aaKnown RBP eCLIP27.01■■□□□ 1.91
DEPDC7-201ENST00000241051 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
DEPDC7-201ENST00000241051 SUPT5HO00267 1087 aaKnown RBP26.66■■□□□ 1.86
DEPDC7-201ENST00000241051 RSF1Q96T23 1441 aaPredicted RBP26.53■■□□□ 1.84
DEPDC7-201ENST00000241051 BAZ1AQ9NRL2 1556 aaPredicted RBP26.51■■□□□ 1.83
DEPDC7-201ENST00000241051 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
DEPDC7-201ENST00000241051 SMARCA4P51532 1647 aa26.42■■□□□ 1.82
DEPDC7-201ENST00000241051 WIZO95785 1651 aa26.25■■□□□ 1.79
DEPDC7-201ENST00000241051 EIF4G1Q04637 1599 aaKnown RBP26.23■■□□□ 1.79
DEPDC7-201ENST00000241051 PEG3Q9GZU2 1588 aa26.11■■□□□ 1.77
DEPDC7-201ENST00000241051 ATAD2BQ9ULI0 1458 aa26.08■■□□□ 1.77
DEPDC7-201ENST00000241051 SMARCA2P51531 1590 aa26.04■■□□□ 1.76
DEPDC7-201ENST00000241051 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
DEPDC7-201ENST00000241051 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
DEPDC7-201ENST00000241051 BAZ1BQ9UIG0 1483 aaKnown RBP25.91■■□□□ 1.74
DEPDC7-201ENST00000241051 CC2D2AQ9P2K1 1620 aa25.91■■□□□ 1.74
DEPDC7-201ENST00000241051 HMGXB3Q12766 1538 aa25.82■■□□□ 1.72
DEPDC7-201ENST00000241051 CCDC88BA6NC98 1476 aa25.74■■□□□ 1.71
DEPDC7-201ENST00000241051 DNAJC5BQ9UF47 199 aa25.55■■□□□ 1.68
DEPDC7-201ENST00000241051 CHIC1Q5VXU3 224 aa25.39■■□□□ 1.65
DEPDC7-201ENST00000241051 CFTRP13569 1480 aa25.25■■□□□ 1.63
DEPDC7-201ENST00000241051 CADPSQ9ULU8 1353 aa25.24■■□□□ 1.63
DEPDC7-201ENST00000241051 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
DEPDC7-201ENST00000241051 ABCC8Q09428 1581 aa25.07■■□□□ 1.6
DEPDC7-201ENST00000241051 NESP48681 1621 aa25.06■■□□□ 1.6
DEPDC7-201ENST00000241051 LAMC3Q9Y6N6 1575 aa25.04■■□□□ 1.6
DEPDC7-201ENST00000241051 PRDM2Q13029 1718 aa25.02■■□□□ 1.6
DEPDC7-201ENST00000241051 WRNQ14191 1432 aaPredicted RBP eCLIP24.98■■□□□ 1.59
DEPDC7-201ENST00000241051 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
DEPDC7-201ENST00000241051 PDS5BQ9NTI5 1447 aa24.89■■□□□ 1.58
DEPDC7-201ENST00000241051 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
DEPDC7-201ENST00000241051 CEP164Q9UPV0 1460 aa24.8■■□□□ 1.56
DEPDC7-201ENST00000241051 CUX1P39880 1505 aa24.79■■□□□ 1.56
DEPDC7-201ENST00000241051 TOP2BQ02880 1626 aa24.78■■□□□ 1.56
DEPDC7-201ENST00000241051 BIVM-ERCC5R4GMW8 1640 aa24.75■■□□□ 1.55
DEPDC7-201ENST00000241051 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
DEPDC7-201ENST00000241051 DNMBPQ6XZF7 1577 aa24.64■■□□□ 1.54
DEPDC7-201ENST00000241051 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
DEPDC7-201ENST00000241051 TOPBP1Q92547 1522 aa24.63■■□□□ 1.53
DEPDC7-201ENST00000241051 FAM9AQ8IZU1 332 aaPredicted RBP24.62■■□□□ 1.53
DEPDC7-201ENST00000241051 ERCC6Q03468 1493 aa24.6■■□□□ 1.53
DEPDC7-201ENST00000241051 SOGA1O94964 1423 aa24.59■■□□□ 1.53
DEPDC7-201ENST00000241051 MRC2Q9UBG0 1479 aa24.57■■□□□ 1.52
DEPDC7-201ENST00000241051 FGD5Q6ZNL6 1462 aa24.56■■□□□ 1.52
DEPDC7-201ENST00000241051 RUSC2Q8N2Y8 1516 aa24.5■■□□□ 1.51
DEPDC7-201ENST00000241051 POLA1P09884 1462 aaPredicted RBP24.49■■□□□ 1.51
DEPDC7-201ENST00000241051 EEA1Q15075 1411 aa24.49■■□□□ 1.51
DEPDC7-201ENST00000241051 WDR62O43379 1518 aa24.44■■□□□ 1.5
DEPDC7-201ENST00000241051 RAD54L2Q9Y4B4 1467 aa24.42■■□□□ 1.5
DEPDC7-201ENST00000241051 LOC105371045A0A1W2PR82 267 aa24.42■■□□□ 1.5
DEPDC7-201ENST00000241051 CSRNP3Q8WYN3 585 aa24.42■■□□□ 1.5
DEPDC7-201ENST00000241051 THOC2Q8NI27 1593 aaKnown RBP24.4■■□□□ 1.5
DEPDC7-201ENST00000241051 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
DEPDC7-201ENST00000241051 CUX2O14529 1486 aa24.37■■□□□ 1.49
DEPDC7-201ENST00000241051 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
DEPDC7-201ENST00000241051 EHMT2Q96KQ7 1210 aa24.27■■□□□ 1.48
DEPDC7-201ENST00000241051 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
DEPDC7-201ENST00000241051 IFT140Q96RY7 1462 aa24.24■■□□□ 1.47
DEPDC7-201ENST00000241051 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
DEPDC7-201ENST00000241051 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
DEPDC7-201ENST00000241051 IGF1RP08069 1367 aa24.21■■□□□ 1.47
DEPDC7-201ENST00000241051 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
DEPDC7-201ENST00000241051 KIF21BO75037 1637 aa24.14■■□□□ 1.46
DEPDC7-201ENST00000241051 ABCA5Q8WWZ7 1642 aa24.14■■□□□ 1.46
DEPDC7-201ENST00000241051 PRXQ9BXM0 1461 aa24.14■■□□□ 1.46
DEPDC7-201ENST00000241051 GOLGA3Q08378 1498 aa24.12■■□□□ 1.45
DEPDC7-201ENST00000241051 AQRO60306 1485 aaKnown RBP eCLIP24.1■■□□□ 1.45
DEPDC7-201ENST00000241051 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
DEPDC7-201ENST00000241051 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
DEPDC7-201ENST00000241051 CARMIL1Q5VZK9 1371 aa24.09■■□□□ 1.45
DEPDC7-201ENST00000241051 UBTFP17480 764 aaKnown RBP24.08■■□□□ 1.44
DEPDC7-201ENST00000241051 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
DEPDC7-201ENST00000241051 TNIKQ9UKE5 1360 aa24.03■■□□□ 1.44
DEPDC7-201ENST00000241051 GRIN2BQ13224 1484 aa24■■□□□ 1.43
DEPDC7-201ENST00000241051 CUL7Q14999 1698 aa23.99■■□□□ 1.43
DEPDC7-201ENST00000241051 EIF4G3O43432 1585 aaKnown RBP23.98■■□□□ 1.43
DEPDC7-201ENST00000241051 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
DEPDC7-201ENST00000241051 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.41
DEPDC7-201ENST00000241051 SNAPC4Q5SXM2 1469 aa23.86■■□□□ 1.41
DEPDC7-201ENST00000241051 CEP162Q5TB80 1403 aa23.85■■□□□ 1.41
DEPDC7-201ENST00000241051 ADAMTS12P58397 1594 aa23.85■■□□□ 1.41
DEPDC7-201ENST00000241051 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
DEPDC7-201ENST00000241051 RANGAP1P46060 587 aaPredicted RBP23.75■■□□□ 1.39
DEPDC7-201ENST00000241051 CLIP1P30622 1438 aa23.74■■□□□ 1.39
DEPDC7-201ENST00000241051 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
DEPDC7-201ENST00000241051 SYNJ2O15056 1496 aa23.73■■□□□ 1.39
DEPDC7-201ENST00000241051 GRIN2AQ12879 1464 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms