RNA–Protein interactions for RNA: ENST00000320431.7

AMIGO3-201, Transcript of adhesion molecule with Ig like domain 3, humanhuman

APPRIS P1 BASIC

Gene AMIGO3, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMIGO3-201ENST00000320431 NISCHQ9Y2I1 1504 aa29.03■■■□□ 2.24
AMIGO3-201ENST00000320431 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
AMIGO3-201ENST00000320431 ABCC9O60706 1549 aa24.65■■□□□ 1.54
AMIGO3-201ENST00000320431 MYO15BQ96JP2 1530 aa24.29■■□□□ 1.48
AMIGO3-201ENST00000320431 ZCCHC6Q5VYS8 1495 aaKnown RBP24.28■■□□□ 1.48
AMIGO3-201ENST00000320431 DCAF1Q9Y4B6 1507 aa24.24■■□□□ 1.47
AMIGO3-201ENST00000320431 NACADO15069 1562 aa24.2■■□□□ 1.46
AMIGO3-201ENST00000320431 RB1CC1Q8TDY2 1594 aa24.11■■□□□ 1.45
AMIGO3-201ENST00000320431 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
AMIGO3-201ENST00000320431 UNC13AQ9UPW8 1703 aa23.61■■□□□ 1.37
AMIGO3-201ENST00000320431 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
AMIGO3-201ENST00000320431 SCRIBQ14160 1630 aa23.34■■□□□ 1.33
AMIGO3-201ENST00000320431 BICRAQ9NZM4 1560 aa23.34■■□□□ 1.33
AMIGO3-201ENST00000320431 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.26
AMIGO3-201ENST00000320431 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
AMIGO3-201ENST00000320431 HRCP23327 699 aa22.64■■□□□ 1.21
AMIGO3-201ENST00000320431 PELP1Q8IZL8 1130 aaKnown RBP22.59■■□□□ 1.21
AMIGO3-201ENST00000320431 PPARGC1BQ86YN6 1023 aaKnown RBP22.53■■□□□ 1.2
AMIGO3-201ENST00000320431 BAZ1AQ9NRL2 1556 aaPredicted RBP22.52■■□□□ 1.2
AMIGO3-201ENST00000320431 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
AMIGO3-201ENST00000320431 CC2D2AQ9P2K1 1620 aa22.48■■□□□ 1.19
AMIGO3-201ENST00000320431 CECR2Q9BXF3 1484 aa22.42■■□□□ 1.18
AMIGO3-201ENST00000320431 PEG3Q9GZU2 1588 aa22.41■■□□□ 1.18
AMIGO3-201ENST00000320431 SMARCA2P51531 1590 aa22.33■■□□□ 1.17
AMIGO3-201ENST00000320431 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
AMIGO3-201ENST00000320431 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
AMIGO3-201ENST00000320431 DNAJC5BQ9UF47 199 aa22.26■■□□□ 1.15
AMIGO3-201ENST00000320431 NCAPD3P42695 1498 aa22.25■■□□□ 1.15
AMIGO3-201ENST00000320431 ATAD2BQ9ULI0 1458 aa22.24■■□□□ 1.15
AMIGO3-201ENST00000320431 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
AMIGO3-201ENST00000320431 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
AMIGO3-201ENST00000320431 WIZO95785 1651 aa22.08■■□□□ 1.12
AMIGO3-201ENST00000320431 BAZ1BQ9UIG0 1483 aaKnown RBP22.05■■□□□ 1.12
AMIGO3-201ENST00000320431 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
AMIGO3-201ENST00000320431 SCAF1Q9H7N4 1312 aaKnown RBP21.96■■□□□ 1.11
AMIGO3-201ENST00000320431 MYT1Q01538 1121 aa21.78■■□□□ 1.08
AMIGO3-201ENST00000320431 LAMC3Q9Y6N6 1575 aa21.68■■□□□ 1.06
AMIGO3-201ENST00000320431 PRDM2Q13029 1718 aa21.62■■□□□ 1.05
AMIGO3-201ENST00000320431 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.04
AMIGO3-201ENST00000320431 CFTRP13569 1480 aa21.52■■□□□ 1.04
AMIGO3-201ENST00000320431 CADPSQ9ULU8 1353 aa21.52■■□□□ 1.04
AMIGO3-201ENST00000320431 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
AMIGO3-201ENST00000320431 NESP48681 1621 aa21.42■■□□□ 1.02
AMIGO3-201ENST00000320431 PDS5BQ9NTI5 1447 aa21.4■■□□□ 1.02
AMIGO3-201ENST00000320431 KIF21AQ7Z4S6 1674 aa21.37■■□□□ 1.01
AMIGO3-201ENST00000320431 THOC2Q8NI27 1593 aaKnown RBP21.29■■□□□ 1
AMIGO3-201ENST00000320431 FANCD2Q9BXW9 1451 aa21.27■■□□□ 1
AMIGO3-201ENST00000320431 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
AMIGO3-201ENST00000320431 CEP164Q9UPV0 1460 aa21.25■□□□□ 0.99
AMIGO3-201ENST00000320431 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
AMIGO3-201ENST00000320431 WDR62O43379 1518 aa21.19■□□□□ 0.98
AMIGO3-201ENST00000320431 CUX2O14529 1486 aa21.17■□□□□ 0.98
AMIGO3-201ENST00000320431 ABCC8Q09428 1581 aa21.14■□□□□ 0.97
AMIGO3-201ENST00000320431 NEUROD1Q13562 356 aa21.14■□□□□ 0.97
AMIGO3-201ENST00000320431 GTF3C3Q9Y5Q9 886 aa21.11■□□□□ 0.97
AMIGO3-201ENST00000320431 ACIN1Q9UKV3 1341 aaKnown RBP21.08■□□□□ 0.97
AMIGO3-201ENST00000320431 DNMBPQ6XZF7 1577 aa21.08■□□□□ 0.96
AMIGO3-201ENST00000320431 URB2Q14146 1524 aaKnown RBP21.05■□□□□ 0.96
AMIGO3-201ENST00000320431 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
AMIGO3-201ENST00000320431 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
AMIGO3-201ENST00000320431 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
AMIGO3-201ENST00000320431 CUX1P39880 1505 aa20.92■□□□□ 0.94
AMIGO3-201ENST00000320431 TOP2BQ02880 1626 aa20.92■□□□□ 0.94
AMIGO3-201ENST00000320431 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
AMIGO3-201ENST00000320431 LOC105371045A0A1W2PR82 267 aa20.89■□□□□ 0.94
AMIGO3-201ENST00000320431 WDR97A6NE52 1622 aa20.89■□□□□ 0.93
AMIGO3-201ENST00000320431 WRNQ14191 1432 aaPredicted RBP eCLIP20.85■□□□□ 0.93
AMIGO3-201ENST00000320431 IFT140Q96RY7 1462 aa20.84■□□□□ 0.93
AMIGO3-201ENST00000320431 TARBP1Q13395 1621 aaKnown RBP20.83■□□□□ 0.92
AMIGO3-201ENST00000320431 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
AMIGO3-201ENST00000320431 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
AMIGO3-201ENST00000320431 ZEB1P37275 1124 aaPredicted RBP20.79■□□□□ 0.92
AMIGO3-201ENST00000320431 BCL11AQ9H165 835 aa20.79■□□□□ 0.92
AMIGO3-201ENST00000320431 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
AMIGO3-201ENST00000320431 ABCA10Q8WWZ4 1543 aa20.69■□□□□ 0.9
AMIGO3-201ENST00000320431 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
AMIGO3-201ENST00000320431 SOGA1O94964 1423 aa20.67■□□□□ 0.9
AMIGO3-201ENST00000320431 CENPBP07199 599 aaPredicted RBP20.65■□□□□ 0.9
AMIGO3-201ENST00000320431 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
AMIGO3-201ENST00000320431 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.89
AMIGO3-201ENST00000320431 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
AMIGO3-201ENST00000320431 PBRM1Q86U86 1689 aa20.57■□□□□ 0.88
AMIGO3-201ENST00000320431 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
AMIGO3-201ENST00000320431 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
AMIGO3-201ENST00000320431 ERICH3Q5RHP9 1530 aa20.5■□□□□ 0.87
AMIGO3-201ENST00000320431 GRIN2BQ13224 1484 aa20.49■□□□□ 0.87
AMIGO3-201ENST00000320431 YTHDC1Q96MU7 727 aaKnown RBP20.48■□□□□ 0.87
AMIGO3-201ENST00000320431 GAPVD1Q14C86 1478 aa20.48■□□□□ 0.87
AMIGO3-201ENST00000320431 PRKCSHP14314 528 aaPredicted RBP20.48■□□□□ 0.87
AMIGO3-201ENST00000320431 MAGI1Q96QZ7 1491 aaPredicted RBP20.47■□□□□ 0.87
AMIGO3-201ENST00000320431 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.86
AMIGO3-201ENST00000320431 DIEXFQ68CQ4 756 aaKnown RBP20.42■□□□□ 0.86
AMIGO3-201ENST00000320431 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
AMIGO3-201ENST00000320431 CUL7Q14999 1698 aa20.41■□□□□ 0.86
AMIGO3-201ENST00000320431 TDRD9Q8NDG6 1382 aaKnown RBP20.41■□□□□ 0.86
AMIGO3-201ENST00000320431 ADAMTS12P58397 1594 aa20.39■□□□□ 0.85
AMIGO3-201ENST00000320431 SNAPC4Q5SXM2 1469 aa20.35■□□□□ 0.85
AMIGO3-201ENST00000320431 TRIM41Q8WV44 630 aa20.35■□□□□ 0.85
AMIGO3-201ENST00000320431 CHD1O14646 1710 aa20.35■□□□□ 0.85
AMIGO3-201ENST00000320431 SYNJ2O15056 1496 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms