RNA–Protein interactions for RNA: ENST00000373826.3

RAB42-201, Transcript of RAB42, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB42, Length 1,950 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42-201ENST00000373826 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.81
RAB42-201ENST00000373826 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
RAB42-201ENST00000373826 HRCP23327 699 aa22.43■■□□□ 1.18
RAB42-201ENST00000373826 SHROOM4Q9ULL8 1493 aa22.38■■□□□ 1.17
RAB42-201ENST00000373826 ZCCHC6Q5VYS8 1495 aaKnown RBP22.36■■□□□ 1.17
RAB42-201ENST00000373826 SUPT5HO00267 1087 aaKnown RBP22.22■■□□□ 1.15
RAB42-201ENST00000373826 MYO15BQ96JP2 1530 aa22.03■■□□□ 1.12
RAB42-201ENST00000373826 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
RAB42-201ENST00000373826 PCGF6Q9BYE7 350 aa21.88■■□□□ 1.09
RAB42-201ENST00000373826 DCAF1Q9Y4B6 1507 aa21.77■■□□□ 1.08
RAB42-201ENST00000373826 PPARGC1BQ86YN6 1023 aaKnown RBP21.72■■□□□ 1.07
RAB42-201ENST00000373826 DCAF8L2P0C7V8 631 aa21.6■■□□□ 1.05
RAB42-201ENST00000373826 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
RAB42-201ENST00000373826 TRIM26Q12899 539 aaPredicted RBP21.42■■□□□ 1.02
RAB42-201ENST00000373826 ZEB1P37275 1124 aaPredicted RBP21.31■■□□□ 1
RAB42-201ENST00000373826 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
RAB42-201ENST00000373826 ABCC9O60706 1549 aa21.12■□□□□ 0.97
RAB42-201ENST00000373826 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
RAB42-201ENST00000373826 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
RAB42-201ENST00000373826 RSF1Q96T23 1441 aaPredicted RBP20.89■□□□□ 0.94
RAB42-201ENST00000373826 RB1CC1Q8TDY2 1594 aa20.73■□□□□ 0.91
RAB42-201ENST00000373826 MYT1Q01538 1121 aa20.72■□□□□ 0.91
RAB42-201ENST00000373826 NACADO15069 1562 aa20.71■□□□□ 0.91
RAB42-201ENST00000373826 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
RAB42-201ENST00000373826 ACIN1Q9UKV3 1341 aaKnown RBP20.64■□□□□ 0.9
RAB42-201ENST00000373826 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
RAB42-201ENST00000373826 MROH2BQ7Z745 1585 aa20.49■□□□□ 0.87
RAB42-201ENST00000373826 NEUROD1Q13562 356 aa20.49■□□□□ 0.87
RAB42-201ENST00000373826 FAM9AQ8IZU1 332 aaPredicted RBP20.48■□□□□ 0.87
RAB42-201ENST00000373826 CENPBP07199 599 aaPredicted RBP20.46■□□□□ 0.87
RAB42-201ENST00000373826 WIZO95785 1651 aa20.39■□□□□ 0.85
RAB42-201ENST00000373826 CCER1Q8TC90 406 aaPredicted RBP20.37■□□□□ 0.85
RAB42-201ENST00000373826 GTF3C3Q9Y5Q9 886 aa20.37■□□□□ 0.85
RAB42-201ENST00000373826 DIEXFQ68CQ4 756 aaKnown RBP20.35■□□□□ 0.85
RAB42-201ENST00000373826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.84
RAB42-201ENST00000373826 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
RAB42-201ENST00000373826 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
RAB42-201ENST00000373826 EHMT2Q96KQ7 1210 aa20.23■□□□□ 0.83
RAB42-201ENST00000373826 WRNQ14191 1432 aaPredicted RBP eCLIP20.18■□□□□ 0.82
RAB42-201ENST00000373826 TOP2AP11388 1531 aaKnown RBP20.11■□□□□ 0.81
RAB42-201ENST00000373826 SMARCA4P51532 1647 aa20.08■□□□□ 0.81
RAB42-201ENST00000373826 ZNF316A6NFI3 1004 aaPredicted RBP20.06■□□□□ 0.8
RAB42-201ENST00000373826 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
RAB42-201ENST00000373826 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
RAB42-201ENST00000373826 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
RAB42-201ENST00000373826 CEP162Q5TB80 1403 aa19.95■□□□□ 0.78
RAB42-201ENST00000373826 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
RAB42-201ENST00000373826 TNIKQ9UKE5 1360 aa19.92■□□□□ 0.78
RAB42-201ENST00000373826 EEA1Q15075 1411 aa19.83■□□□□ 0.76
RAB42-201ENST00000373826 YTHDC1Q96MU7 727 aaKnown RBP19.81■□□□□ 0.76
RAB42-201ENST00000373826 MIER1Q8N108 512 aa19.8■□□□□ 0.76
RAB42-201ENST00000373826 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
RAB42-201ENST00000373826 TTBK1Q5TCY1 1321 aaPredicted RBP19.77■□□□□ 0.75
RAB42-201ENST00000373826 SOGA1O94964 1423 aa19.76■□□□□ 0.75
RAB42-201ENST00000373826 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
RAB42-201ENST00000373826 PEG3Q9GZU2 1588 aa19.74■□□□□ 0.75
RAB42-201ENST00000373826 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
RAB42-201ENST00000373826 GOLGA3Q08378 1498 aa19.68■□□□□ 0.74
RAB42-201ENST00000373826 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
RAB42-201ENST00000373826 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
RAB42-201ENST00000373826 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
RAB42-201ENST00000373826 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
RAB42-201ENST00000373826 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
RAB42-201ENST00000373826 ATAD2BQ9ULI0 1458 aa19.51■□□□□ 0.71
RAB42-201ENST00000373826 KIF21BO75037 1637 aa19.51■□□□□ 0.71
RAB42-201ENST00000373826 CEP164Q9UPV0 1460 aa19.5■□□□□ 0.71
RAB42-201ENST00000373826 SUPT16HQ9Y5B9 1047 aaKnown RBP19.49■□□□□ 0.71
RAB42-201ENST00000373826 VPS8Q8N3P4 1428 aa19.47■□□□□ 0.71
RAB42-201ENST00000373826 CLIP1P30622 1438 aa19.45■□□□□ 0.7
RAB42-201ENST00000373826 BAZ1BQ9UIG0 1483 aaKnown RBP19.44■□□□□ 0.7
RAB42-201ENST00000373826 APLP2Q06481 763 aa19.37■□□□□ 0.69
RAB42-201ENST00000373826 ANP32EQ9BTT0 268 aa19.37■□□□□ 0.69
RAB42-201ENST00000373826 TSHZ2Q9NRE2 1034 aa19.36■□□□□ 0.69
RAB42-201ENST00000373826 DHX57Q6P158 1386 aaKnown RBP19.33■□□□□ 0.68
RAB42-201ENST00000373826 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
RAB42-201ENST00000373826 RAPGEF2Q9Y4G8 1499 aa19.29■□□□□ 0.68
RAB42-201ENST00000373826 BIVM-ERCC5R4GMW8 1640 aa19.28■□□□□ 0.68
RAB42-201ENST00000373826 ERICH3Q5RHP9 1530 aa19.18■□□□□ 0.66
RAB42-201ENST00000373826 HMGXB3Q12766 1538 aa19.17■□□□□ 0.66
RAB42-201ENST00000373826 CUX2O14529 1486 aa19.17■□□□□ 0.66
RAB42-201ENST00000373826 PRXQ9BXM0 1461 aa19.15■□□□□ 0.66
RAB42-201ENST00000373826 NCAPD3P42695 1498 aa19.14■□□□□ 0.65
RAB42-201ENST00000373826 RRBP1Q9P2E9 1410 aaKnown RBP19.12■□□□□ 0.65
RAB42-201ENST00000373826 BCL11AQ9H165 835 aa19.12■□□□□ 0.65
RAB42-201ENST00000373826 CUX1P39880 1505 aa19.08■□□□□ 0.64
RAB42-201ENST00000373826 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
RAB42-201ENST00000373826 CFTRP13569 1480 aa19.01■□□□□ 0.63
RAB42-201ENST00000373826 RANGAP1P46060 587 aaPredicted RBP19■□□□□ 0.63
RAB42-201ENST00000373826 KANK4Q5T7N3 995 aaPredicted RBP18.99■□□□□ 0.63
RAB42-201ENST00000373826 KIF27Q86VH2 1401 aa18.99■□□□□ 0.63
RAB42-201ENST00000373826 CCNB3Q8WWL7 1395 aa18.98■□□□□ 0.63
RAB42-201ENST00000373826 FKBP8Q14318 412 aa18.97■□□□□ 0.63
RAB42-201ENST00000373826 KCNH8Q96L42 1107 aa18.96■□□□□ 0.63
RAB42-201ENST00000373826 PRDM2Q13029 1718 aa18.93■□□□□ 0.62
RAB42-201ENST00000373826 BCANQ96GW7 911 aa18.93■□□□□ 0.62
RAB42-201ENST00000373826 NEFLP07196 543 aa18.92■□□□□ 0.62
RAB42-201ENST00000373826 RBM19Q9Y4C8 960 aaKnown RBP18.92■□□□□ 0.62
RAB42-201ENST00000373826 MAPKBP1O60336 1514 aa18.91■□□□□ 0.62
RAB42-201ENST00000373826 ARHGAP35Q9NRY4 1499 aa18.87■□□□□ 0.61
RAB42-201ENST00000373826 RAB3GAP2Q9H2M9 1393 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms