RNA–Protein interactions for RNA: ENST00000332149.9

TMPRSS2-201, Transcript of transmembrane serine protease 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMPRSS2, Length 3,205 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS2-201ENST00000332149 NISCHQ9Y2I1 1504 aa32.96■■■□□ 2.87
TMPRSS2-201ENST00000332149 CCDC180Q9P1Z9 1646 aa29.04■■■□□ 2.24
TMPRSS2-201ENST00000332149 ZCCHC6Q5VYS8 1495 aaKnown RBP27.84■■■□□ 2.05
TMPRSS2-201ENST00000332149 DCAF1Q9Y4B6 1507 aa27.68■■■□□ 2.02
TMPRSS2-201ENST00000332149 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
TMPRSS2-201ENST00000332149 NACADO15069 1562 aa26.8■■□□□ 1.88
TMPRSS2-201ENST00000332149 ABCC9O60706 1549 aa26.42■■□□□ 1.82
TMPRSS2-201ENST00000332149 RB1CC1Q8TDY2 1594 aa26.4■■□□□ 1.82
TMPRSS2-201ENST00000332149 SCRIBQ14160 1630 aa26.09■■□□□ 1.77
TMPRSS2-201ENST00000332149 SHROOM4Q9ULL8 1493 aa26.08■■□□□ 1.77
TMPRSS2-201ENST00000332149 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
TMPRSS2-201ENST00000332149 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
TMPRSS2-201ENST00000332149 BICRAQ9NZM4 1560 aa25.65■■□□□ 1.7
TMPRSS2-201ENST00000332149 RSF1Q96T23 1441 aaPredicted RBP25.49■■□□□ 1.67
TMPRSS2-201ENST00000332149 BAZ1AQ9NRL2 1556 aaPredicted RBP25.46■■□□□ 1.67
TMPRSS2-201ENST00000332149 SMARCA4P51532 1647 aa25.33■■□□□ 1.65
TMPRSS2-201ENST00000332149 PEG3Q9GZU2 1588 aa25.32■■□□□ 1.64
TMPRSS2-201ENST00000332149 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
TMPRSS2-201ENST00000332149 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
TMPRSS2-201ENST00000332149 SUPT5HO00267 1087 aaKnown RBP25.12■■□□□ 1.61
TMPRSS2-201ENST00000332149 WIZO95785 1651 aa25.11■■□□□ 1.61
TMPRSS2-201ENST00000332149 TOP2AP11388 1531 aaKnown RBP25.08■■□□□ 1.61
TMPRSS2-201ENST00000332149 EIF4G1Q04637 1599 aaKnown RBP24.96■■□□□ 1.59
TMPRSS2-201ENST00000332149 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
TMPRSS2-201ENST00000332149 HMGXB3Q12766 1538 aa24.77■■□□□ 1.56
TMPRSS2-201ENST00000332149 ATAD2BQ9ULI0 1458 aa24.75■■□□□ 1.55
TMPRSS2-201ENST00000332149 NCAPD3P42695 1498 aa24.64■■□□□ 1.53
TMPRSS2-201ENST00000332149 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
TMPRSS2-201ENST00000332149 CHIC1Q5VXU3 224 aa24.61■■□□□ 1.53
TMPRSS2-201ENST00000332149 CCDC88BA6NC98 1476 aa24.59■■□□□ 1.53
TMPRSS2-201ENST00000332149 BAZ1BQ9UIG0 1483 aaKnown RBP24.5■■□□□ 1.51
TMPRSS2-201ENST00000332149 PRDM2Q13029 1718 aa24.34■■□□□ 1.49
TMPRSS2-201ENST00000332149 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
TMPRSS2-201ENST00000332149 CFTRP13569 1480 aa24.1■■□□□ 1.45
TMPRSS2-201ENST00000332149 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
TMPRSS2-201ENST00000332149 TOP2BQ02880 1626 aa23.98■■□□□ 1.43
TMPRSS2-201ENST00000332149 ABCC8Q09428 1581 aa23.96■■□□□ 1.43
TMPRSS2-201ENST00000332149 EEA1Q15075 1411 aa23.95■■□□□ 1.42
TMPRSS2-201ENST00000332149 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
TMPRSS2-201ENST00000332149 WRNQ14191 1432 aaPredicted RBP eCLIP23.9■■□□□ 1.42
TMPRSS2-201ENST00000332149 TRIM41Q8WV44 630 aa23.87■■□□□ 1.41
TMPRSS2-201ENST00000332149 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
TMPRSS2-201ENST00000332149 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
TMPRSS2-201ENST00000332149 CUX1P39880 1505 aa23.71■■□□□ 1.39
TMPRSS2-201ENST00000332149 KIF21BO75037 1637 aa23.7■■□□□ 1.38
TMPRSS2-201ENST00000332149 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
TMPRSS2-201ENST00000332149 SOGA1O94964 1423 aa23.51■■□□□ 1.35
TMPRSS2-201ENST00000332149 FANCD2Q9BXW9 1451 aa23.51■■□□□ 1.35
TMPRSS2-201ENST00000332149 ERICH3Q5RHP9 1530 aa23.51■■□□□ 1.35
TMPRSS2-201ENST00000332149 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
TMPRSS2-201ENST00000332149 CEP164Q9UPV0 1460 aa23.44■■□□□ 1.34
TMPRSS2-201ENST00000332149 GOLGA3Q08378 1498 aa23.42■■□□□ 1.34
TMPRSS2-201ENST00000332149 RUSC2Q8N2Y8 1516 aa23.41■■□□□ 1.34
TMPRSS2-201ENST00000332149 TNIKQ9UKE5 1360 aa23.4■■□□□ 1.34
TMPRSS2-201ENST00000332149 PRXQ9BXM0 1461 aa23.39■■□□□ 1.33
TMPRSS2-201ENST00000332149 DNAJC5BQ9UF47 199 aa23.37■■□□□ 1.33
TMPRSS2-201ENST00000332149 TOPBP1Q92547 1522 aa23.37■■□□□ 1.33
TMPRSS2-201ENST00000332149 PDS5BQ9NTI5 1447 aa23.36■■□□□ 1.33
TMPRSS2-201ENST00000332149 KIF21AQ7Z4S6 1674 aa23.34■■□□□ 1.33
TMPRSS2-201ENST00000332149 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
TMPRSS2-201ENST00000332149 CSRNP3Q8WYN3 585 aa23.32■■□□□ 1.32
TMPRSS2-201ENST00000332149 NESP48681 1621 aa23.31■■□□□ 1.32
TMPRSS2-201ENST00000332149 FGD5Q6ZNL6 1462 aa23.31■■□□□ 1.32
TMPRSS2-201ENST00000332149 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
TMPRSS2-201ENST00000332149 KIF27Q86VH2 1401 aa23.29■■□□□ 1.32
TMPRSS2-201ENST00000332149 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
TMPRSS2-201ENST00000332149 ABCA5Q8WWZ7 1642 aa23.24■■□□□ 1.31
TMPRSS2-201ENST00000332149 POLA1P09884 1462 aaPredicted RBP23.22■■□□□ 1.31
TMPRSS2-201ENST00000332149 CUL7Q14999 1698 aa23.22■■□□□ 1.31
TMPRSS2-201ENST00000332149 WDR62O43379 1518 aa23.19■■□□□ 1.3
TMPRSS2-201ENST00000332149 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
TMPRSS2-201ENST00000332149 MRC2Q9UBG0 1479 aa23.14■■□□□ 1.3
TMPRSS2-201ENST00000332149 CEP162Q5TB80 1403 aa23.13■■□□□ 1.29
TMPRSS2-201ENST00000332149 RAPGEF2Q9Y4G8 1499 aa23.11■■□□□ 1.29
TMPRSS2-201ENST00000332149 THOC2Q8NI27 1593 aaKnown RBP23.08■■□□□ 1.29
TMPRSS2-201ENST00000332149 CUX2O14529 1486 aa23.07■■□□□ 1.28
TMPRSS2-201ENST00000332149 IGF1RP08069 1367 aa23.06■■□□□ 1.28
TMPRSS2-201ENST00000332149 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
TMPRSS2-201ENST00000332149 PBRM1Q86U86 1689 aa22.97■■□□□ 1.27
TMPRSS2-201ENST00000332149 CTTNBP2Q8WZ74 1663 aa22.95■■□□□ 1.26
TMPRSS2-201ENST00000332149 RAD54L2Q9Y4B4 1467 aa22.93■■□□□ 1.26
TMPRSS2-201ENST00000332149 IFT140Q96RY7 1462 aa22.93■■□□□ 1.26
TMPRSS2-201ENST00000332149 CLIP1P30622 1438 aa22.87■■□□□ 1.25
TMPRSS2-201ENST00000332149 VPS8Q8N3P4 1428 aa22.87■■□□□ 1.25
TMPRSS2-201ENST00000332149 CARMIL1Q5VZK9 1371 aa22.85■■□□□ 1.25
TMPRSS2-201ENST00000332149 EFCAB5A4FU69 1503 aa22.84■■□□□ 1.25
TMPRSS2-201ENST00000332149 GAPVD1Q14C86 1478 aa22.84■■□□□ 1.25
TMPRSS2-201ENST00000332149 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
TMPRSS2-201ENST00000332149 ARAP1Q96P48 1450 aa22.84■■□□□ 1.25
TMPRSS2-201ENST00000332149 MAP3K1Q13233 1512 aa22.81■■□□□ 1.24
TMPRSS2-201ENST00000332149 SAMD9Q5K651 1589 aa22.77■■□□□ 1.24
TMPRSS2-201ENST00000332149 ARHGAP35Q9NRY4 1499 aa22.75■■□□□ 1.23
TMPRSS2-201ENST00000332149 ERCC6Q03468 1493 aa22.74■■□□□ 1.23
TMPRSS2-201ENST00000332149 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
TMPRSS2-201ENST00000332149 GRIN2BQ13224 1484 aa22.72■■□□□ 1.23
TMPRSS2-201ENST00000332149 EIF4G3O43432 1585 aaKnown RBP22.7■■□□□ 1.23
TMPRSS2-201ENST00000332149 FHAD1B1AJZ9 1412 aa22.7■■□□□ 1.22
TMPRSS2-201ENST00000332149 AQRO60306 1485 aaKnown RBP eCLIP22.7■■□□□ 1.22
TMPRSS2-201ENST00000332149 UBTFP17480 764 aaKnown RBP22.67■■□□□ 1.22
TMPRSS2-201ENST00000332149 CFAP43Q8NDM7 1665 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms