RNA–Protein interactions for RNA: ENST00000356200.7

CDK11A-201, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5 BASIC

Gene CDK11A, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-201ENST00000356200 NISCHQ9Y2I1 1504 aa33.09■■■□□ 2.89
CDK11A-201ENST00000356200 CCDC180Q9P1Z9 1646 aa29.29■■■□□ 2.28
CDK11A-201ENST00000356200 ABCC9O60706 1549 aa28.13■■■□□ 2.09
CDK11A-201ENST00000356200 ZCCHC6Q5VYS8 1495 aaKnown RBP27.66■■■□□ 2.02
CDK11A-201ENST00000356200 DCAF8L2P0C7V8 631 aa27.57■■■□□ 2
CDK11A-201ENST00000356200 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
CDK11A-201ENST00000356200 MYO15BQ96JP2 1530 aa27.42■■□□□ 1.98
CDK11A-201ENST00000356200 NACADO15069 1562 aa27.41■■□□□ 1.98
CDK11A-201ENST00000356200 RB1CC1Q8TDY2 1594 aa27.33■■□□□ 1.96
CDK11A-201ENST00000356200 SHROOM4Q9ULL8 1493 aa26.75■■□□□ 1.87
CDK11A-201ENST00000356200 UNC13AQ9UPW8 1703 aa26.74■■□□□ 1.87
CDK11A-201ENST00000356200 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
CDK11A-201ENST00000356200 BICRAQ9NZM4 1560 aa26.48■■□□□ 1.83
CDK11A-201ENST00000356200 PABPN1Q86U42 306 aaKnown RBP eCLIP26.32■■□□□ 1.8
CDK11A-201ENST00000356200 CECR2Q9BXF3 1484 aa25.78■■□□□ 1.72
CDK11A-201ENST00000356200 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
CDK11A-201ENST00000356200 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
CDK11A-201ENST00000356200 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
CDK11A-201ENST00000356200 MROH2BQ7Z745 1585 aa25.55■■□□□ 1.68
CDK11A-201ENST00000356200 CC2D2AQ9P2K1 1620 aa25.52■■□□□ 1.68
CDK11A-201ENST00000356200 SUPT5HO00267 1087 aaKnown RBP25.48■■□□□ 1.67
CDK11A-201ENST00000356200 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
CDK11A-201ENST00000356200 DNAJC5BQ9UF47 199 aa25.42■■□□□ 1.66
CDK11A-201ENST00000356200 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
CDK11A-201ENST00000356200 SMARCA2P51531 1590 aa25.34■■□□□ 1.65
CDK11A-201ENST00000356200 WIZO95785 1651 aa25.34■■□□□ 1.65
CDK11A-201ENST00000356200 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.65
CDK11A-201ENST00000356200 NCAPD3P42695 1498 aa25.27■■□□□ 1.64
CDK11A-201ENST00000356200 HMGXB3Q12766 1538 aa25.21■■□□□ 1.63
CDK11A-201ENST00000356200 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
CDK11A-201ENST00000356200 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
CDK11A-201ENST00000356200 CCDC88BA6NC98 1476 aa24.76■■□□□ 1.55
CDK11A-201ENST00000356200 LAMC3Q9Y6N6 1575 aa24.55■■□□□ 1.52
CDK11A-201ENST00000356200 CADPSQ9ULU8 1353 aa24.53■■□□□ 1.52
CDK11A-201ENST00000356200 CFTRP13569 1480 aa24.49■■□□□ 1.51
CDK11A-201ENST00000356200 NESP48681 1621 aa24.48■■□□□ 1.51
CDK11A-201ENST00000356200 PRDM2Q13029 1718 aa24.42■■□□□ 1.5
CDK11A-201ENST00000356200 PDS5BQ9NTI5 1447 aa24.33■■□□□ 1.49
CDK11A-201ENST00000356200 KIF21AQ7Z4S6 1674 aa24.26■■□□□ 1.47
CDK11A-201ENST00000356200 FANCD2Q9BXW9 1451 aa24.24■■□□□ 1.47
CDK11A-201ENST00000356200 ERCC6Q03468 1493 aa24.22■■□□□ 1.47
CDK11A-201ENST00000356200 CEP164Q9UPV0 1460 aa24.17■■□□□ 1.46
CDK11A-201ENST00000356200 ABCC8Q09428 1581 aa24.13■■□□□ 1.45
CDK11A-201ENST00000356200 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.45
CDK11A-201ENST00000356200 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
CDK11A-201ENST00000356200 MRC2Q9UBG0 1479 aa24.07■■□□□ 1.44
CDK11A-201ENST00000356200 WDR62O43379 1518 aa24■■□□□ 1.43
CDK11A-201ENST00000356200 URB2Q14146 1524 aaKnown RBP23.98■■□□□ 1.43
CDK11A-201ENST00000356200 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
CDK11A-201ENST00000356200 DNMBPQ6XZF7 1577 aa23.95■■□□□ 1.42
CDK11A-201ENST00000356200 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
CDK11A-201ENST00000356200 TRIM41Q8WV44 630 aa23.92■■□□□ 1.42
CDK11A-201ENST00000356200 TOPBP1Q92547 1522 aa23.92■■□□□ 1.42
CDK11A-201ENST00000356200 CUX1P39880 1505 aa23.91■■□□□ 1.42
CDK11A-201ENST00000356200 CUX2O14529 1486 aa23.88■■□□□ 1.41
CDK11A-201ENST00000356200 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
CDK11A-201ENST00000356200 TOP2BQ02880 1626 aa23.83■■□□□ 1.41
CDK11A-201ENST00000356200 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
CDK11A-201ENST00000356200 POLA1P09884 1462 aaPredicted RBP23.73■■□□□ 1.39
CDK11A-201ENST00000356200 IFT140Q96RY7 1462 aa23.67■■□□□ 1.38
CDK11A-201ENST00000356200 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
CDK11A-201ENST00000356200 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.37
CDK11A-201ENST00000356200 SOGA1O94964 1423 aa23.63■■□□□ 1.37
CDK11A-201ENST00000356200 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
CDK11A-201ENST00000356200 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
CDK11A-201ENST00000356200 ABCA10Q8WWZ4 1543 aa23.56■■□□□ 1.36
CDK11A-201ENST00000356200 RUSC2Q8N2Y8 1516 aa23.55■■□□□ 1.36
CDK11A-201ENST00000356200 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
CDK11A-201ENST00000356200 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.34
CDK11A-201ENST00000356200 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
CDK11A-201ENST00000356200 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
CDK11A-201ENST00000356200 AQRO60306 1485 aaKnown RBP eCLIP23.4■■□□□ 1.343e-7■■□□□ 13.7
CDK11A-201ENST00000356200 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
CDK11A-201ENST00000356200 KIF27Q86VH2 1401 aa23.37■■□□□ 1.33
CDK11A-201ENST00000356200 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
CDK11A-201ENST00000356200 EHMT2Q96KQ7 1210 aa23.33■■□□□ 1.33
CDK11A-201ENST00000356200 GRIN2BQ13224 1484 aa23.32■■□□□ 1.32
CDK11A-201ENST00000356200 CSRNP3Q8WYN3 585 aa23.3■■□□□ 1.32
CDK11A-201ENST00000356200 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
CDK11A-201ENST00000356200 EEA1Q15075 1411 aa23.27■■□□□ 1.32
CDK11A-201ENST00000356200 IGF1RP08069 1367 aa23.26■■□□□ 1.31
CDK11A-201ENST00000356200 MAGI1Q96QZ7 1491 aaPredicted RBP23.23■■□□□ 1.31
CDK11A-201ENST00000356200 LOC105371045A0A1W2PR82 267 aa23.23■■□□□ 1.31
CDK11A-201ENST00000356200 SNAPC4Q5SXM2 1469 aa23.22■■□□□ 1.31
CDK11A-201ENST00000356200 CUL7Q14999 1698 aa23.17■■□□□ 1.3
CDK11A-201ENST00000356200 ADAMTS12P58397 1594 aa23.17■■□□□ 1.3
CDK11A-201ENST00000356200 FHAD1B1AJZ9 1412 aa23.13■■□□□ 1.29
CDK11A-201ENST00000356200 CARMIL1Q5VZK9 1371 aa23.13■■□□□ 1.29
CDK11A-201ENST00000356200 SYNJ2O15056 1496 aa23.13■■□□□ 1.29
CDK11A-201ENST00000356200 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
CDK11A-201ENST00000356200 CHD1O14646 1710 aa23.09■■□□□ 1.29
CDK11A-201ENST00000356200 RAPGEF2Q9Y4G8 1499 aa23.09■■□□□ 1.29
CDK11A-201ENST00000356200 KIF21BO75037 1637 aa23.05■■□□□ 1.28
CDK11A-201ENST00000356200 CHMP7Q8WUX9 453 aaPredicted RBP23.03■■□□□ 1.28
CDK11A-201ENST00000356200 FBLN2P98095 1184 aa23.03■■□□□ 1.28
CDK11A-201ENST00000356200 GRIN2AQ12879 1464 aa23.02■■□□□ 1.28
CDK11A-201ENST00000356200 UBTFP17480 764 aaKnown RBP23■■□□□ 1.27
CDK11A-201ENST00000356200 GOLGA3Q08378 1498 aa22.99■■□□□ 1.27
CDK11A-201ENST00000356200 NUP160Q12769 1436 aa22.92■■□□□ 1.26
CDK11A-201ENST00000356200 OSCARQ8IYS5 282 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 360 ms