RNA–Protein interactions for RNA: ENST00000299886.8

COG1-201, Transcript of component of oligomeric golgi complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG1-201ENST00000299886 NISCHQ9Y2I1 1504 aa25.27■■□□□ 1.64
COG1-201ENST00000299886 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
COG1-201ENST00000299886 SUPT5HO00267 1087 aaKnown RBP22.75■■□□□ 1.23
COG1-201ENST00000299886 HRCP23327 699 aa22.43■■□□□ 1.18
COG1-201ENST00000299886 PCGF6Q9BYE7 350 aa22.32■■□□□ 1.16
COG1-201ENST00000299886 PPARGC1BQ86YN6 1023 aaKnown RBP22.26■■□□□ 1.15
COG1-201ENST00000299886 MYO15BQ96JP2 1530 aa22.05■■□□□ 1.12
COG1-201ENST00000299886 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
COG1-201ENST00000299886 DCAF8L2P0C7V8 631 aa21.85■■□□□ 1.09
COG1-201ENST00000299886 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
COG1-201ENST00000299886 TRIM26Q12899 539 aaPredicted RBP21.41■■□□□ 1.02
COG1-201ENST00000299886 ZCCHC6Q5VYS8 1495 aaKnown RBP21.41■■□□□ 1.02
COG1-201ENST00000299886 DCAF1Q9Y4B6 1507 aa21.33■■□□□ 1.01
COG1-201ENST00000299886 EHMT2Q96KQ7 1210 aa21.25■□□□□ 0.99
COG1-201ENST00000299886 PELP1Q8IZL8 1130 aaKnown RBP21.24■□□□□ 0.99
COG1-201ENST00000299886 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
COG1-201ENST00000299886 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
COG1-201ENST00000299886 FAM9AQ8IZU1 332 aaPredicted RBP21.14■□□□□ 0.97
COG1-201ENST00000299886 ZEB1P37275 1124 aaPredicted RBP21.09■□□□□ 0.97
COG1-201ENST00000299886 TRIM41Q8WV44 630 aa20.9■□□□□ 0.94
COG1-201ENST00000299886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.76■□□□□ 0.91
COG1-201ENST00000299886 NEUROD1Q13562 356 aa20.75■□□□□ 0.91
COG1-201ENST00000299886 ACIN1Q9UKV3 1341 aaKnown RBP20.7■□□□□ 0.9
COG1-201ENST00000299886 CCER1Q8TC90 406 aaPredicted RBP20.69■□□□□ 0.9
COG1-201ENST00000299886 TTBK1Q5TCY1 1321 aaPredicted RBP20.67■□□□□ 0.9
COG1-201ENST00000299886 GTF3C3Q9Y5Q9 886 aa20.67■□□□□ 0.9
COG1-201ENST00000299886 DIEXFQ68CQ4 756 aaKnown RBP20.54■□□□□ 0.88
COG1-201ENST00000299886 CENPBP07199 599 aaPredicted RBP20.52■□□□□ 0.87
COG1-201ENST00000299886 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
COG1-201ENST00000299886 ABCC9O60706 1549 aa20.45■□□□□ 0.86
COG1-201ENST00000299886 RSF1Q96T23 1441 aaPredicted RBP20.4■□□□□ 0.86
COG1-201ENST00000299886 SCRIBQ14160 1630 aa20.35■□□□□ 0.85
COG1-201ENST00000299886 RB1CC1Q8TDY2 1594 aa20.31■□□□□ 0.84
COG1-201ENST00000299886 MYT1Q01538 1121 aa20.28■□□□□ 0.84
COG1-201ENST00000299886 ZNF316A6NFI3 1004 aaPredicted RBP20.1■□□□□ 0.81
COG1-201ENST00000299886 MIER1Q8N108 512 aa20.05■□□□□ 0.8
COG1-201ENST00000299886 HNRNPUL2Q1KMD3 747 aaKnown RBP19.98■□□□□ 0.79
COG1-201ENST00000299886 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
COG1-201ENST00000299886 UBTFP17480 764 aaKnown RBP19.95■□□□□ 0.78
COG1-201ENST00000299886 MROH2BQ7Z745 1585 aa19.85■□□□□ 0.77
COG1-201ENST00000299886 CEP162Q5TB80 1403 aa19.83■□□□□ 0.76
COG1-201ENST00000299886 RANGAP1P46060 587 aaPredicted RBP19.79■□□□□ 0.76
COG1-201ENST00000299886 WIZO95785 1651 aa19.77■□□□□ 0.75
COG1-201ENST00000299886 NACADO15069 1562 aa19.75■□□□□ 0.75
COG1-201ENST00000299886 PABPN1Q86U42 306 aaKnown RBP eCLIP19.72■□□□□ 0.75
COG1-201ENST00000299886 CCDC88BA6NC98 1476 aa19.72■□□□□ 0.75
COG1-201ENST00000299886 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
COG1-201ENST00000299886 SOGA1O94964 1423 aa19.71■□□□□ 0.75
COG1-201ENST00000299886 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
COG1-201ENST00000299886 CSRNP3Q8WYN3 585 aa19.67■□□□□ 0.74
COG1-201ENST00000299886 TNIKQ9UKE5 1360 aa19.61■□□□□ 0.73
COG1-201ENST00000299886 SUPT16HQ9Y5B9 1047 aaKnown RBP19.6■□□□□ 0.73
COG1-201ENST00000299886 RUSC2Q8N2Y8 1516 aa19.6■□□□□ 0.73
COG1-201ENST00000299886 APLP2Q06481 763 aa19.59■□□□□ 0.73
COG1-201ENST00000299886 BCANQ96GW7 911 aa19.52■□□□□ 0.72
COG1-201ENST00000299886 TSHZ2Q9NRE2 1034 aa19.47■□□□□ 0.71
COG1-201ENST00000299886 BAZ1AQ9NRL2 1556 aaPredicted RBP19.43■□□□□ 0.7
COG1-201ENST00000299886 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
COG1-201ENST00000299886 ANP32EQ9BTT0 268 aa19.4■□□□□ 0.7
COG1-201ENST00000299886 GOLGA3Q08378 1498 aa19.39■□□□□ 0.7
COG1-201ENST00000299886 KCNH8Q96L42 1107 aa19.37■□□□□ 0.69
COG1-201ENST00000299886 CLIP1P30622 1438 aa19.35■□□□□ 0.69
COG1-201ENST00000299886 ITGAEP38570 1179 aa19.35■□□□□ 0.69
COG1-201ENST00000299886 BCL11AQ9H165 835 aa19.3■□□□□ 0.68
COG1-201ENST00000299886 EEA1Q15075 1411 aa19.3■□□□□ 0.68
COG1-201ENST00000299886 UNC13AQ9UPW8 1703 aa19.29■□□□□ 0.68
COG1-201ENST00000299886 FKBP8Q14318 412 aa19.27■□□□□ 0.68
COG1-201ENST00000299886 CLSPNQ9HAW4 1339 aa19.27■□□□□ 0.67
COG1-201ENST00000299886 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
COG1-201ENST00000299886 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
COG1-201ENST00000299886 DHX57Q6P158 1386 aaKnown RBP19.22■□□□□ 0.67
COG1-201ENST00000299886 VPS8Q8N3P4 1428 aa19.21■□□□□ 0.67
COG1-201ENST00000299886 SMARCA4P51532 1647 aa19.19■□□□□ 0.66
COG1-201ENST00000299886 CEP164Q9UPV0 1460 aa19.18■□□□□ 0.66
COG1-201ENST00000299886 KANK4Q5T7N3 995 aaPredicted RBP19.16■□□□□ 0.66
COG1-201ENST00000299886 DDX10Q13206 875 aaKnown RBP19.14■□□□□ 0.65
COG1-201ENST00000299886 RAPGEF2Q9Y4G8 1499 aa19.12■□□□□ 0.65
COG1-201ENST00000299886 HIRIP3Q9BW71 556 aaPredicted RBP19.11■□□□□ 0.65
COG1-201ENST00000299886 NEFLP07196 543 aa19.1■□□□□ 0.65
COG1-201ENST00000299886 TRIM52Q96A61 297 aa19.1■□□□□ 0.65
COG1-201ENST00000299886 BICRAQ9NZM4 1560 aa19.07■□□□□ 0.64
COG1-201ENST00000299886 RBM19Q9Y4C8 960 aaKnown RBP19.06■□□□□ 0.64
COG1-201ENST00000299886 KIF21BO75037 1637 aa19.01■□□□□ 0.63
COG1-201ENST00000299886 SYNJ1O43426 1573 aa18.99■□□□□ 0.63
COG1-201ENST00000299886 SIN3AQ96ST3 1273 aa18.97■□□□□ 0.63
COG1-201ENST00000299886 IRX6P78412 446 aaPredicted RBP18.93■□□□□ 0.62
COG1-201ENST00000299886 ERICH6Q7L0X2 663 aa18.89■□□□□ 0.61
COG1-201ENST00000299886 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
COG1-201ENST00000299886 FAM50AQ14320 339 aaKnown RBP18.87■□□□□ 0.61
COG1-201ENST00000299886 CCNB3Q8WWL7 1395 aa18.86■□□□□ 0.61
COG1-201ENST00000299886 ATP1B4Q9UN42 357 aaPredicted RBP18.86■□□□□ 0.61
COG1-201ENST00000299886 RAB3GAP2Q9H2M9 1393 aa18.85■□□□□ 0.61
COG1-201ENST00000299886 ANP32CO43423 234 aa18.85■□□□□ 0.61
COG1-201ENST00000299886 MSH5O43196 834 aa18.85■□□□□ 0.61
COG1-201ENST00000299886 ARAP1Q96P48 1450 aa18.81■□□□□ 0.6
COG1-201ENST00000299886 ATAD2BQ9ULI0 1458 aa18.81■□□□□ 0.6
COG1-201ENST00000299886 RRBP1Q9P2E9 1410 aaKnown RBP18.76■□□□□ 0.59
COG1-201ENST00000299886 PPP1R15AO75807 674 aaPredicted RBP18.75■□□□□ 0.59
COG1-201ENST00000299886 HNRNPUQ00839 825 aaKnown RBP eCLIP18.74■□□□□ 0.59
COG1-201ENST00000299886 CDK11AQ9UQ88 783 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms