RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 NISCHQ9Y2I1 1504 aa26.49■■□□□ 1.83
CCDC13-201ENST00000310232 SHROOM4Q9ULL8 1493 aa23.59■■□□□ 1.37
CCDC13-201ENST00000310232 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
CCDC13-201ENST00000310232 MYO15BQ96JP2 1530 aa22.75■■□□□ 1.23
CCDC13-201ENST00000310232 HRCP23327 699 aa22.58■■□□□ 1.21
CCDC13-201ENST00000310232 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
CCDC13-201ENST00000310232 PCGF6Q9BYE7 350 aa22.55■■□□□ 1.2
CCDC13-201ENST00000310232 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
CCDC13-201ENST00000310232 PPARGC1BQ86YN6 1023 aaKnown RBP22.5■■□□□ 1.19
CCDC13-201ENST00000310232 ZCCHC6Q5VYS8 1495 aaKnown RBP22.44■■□□□ 1.18
CCDC13-201ENST00000310232 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
CCDC13-201ENST00000310232 CCDC180Q9P1Z9 1646 aa22.03■■□□□ 1.12
CCDC13-201ENST00000310232 DCAF1Q9Y4B6 1507 aa21.78■■□□□ 1.08
CCDC13-201ENST00000310232 EHMT2Q96KQ7 1210 aa21.72■■□□□ 1.07
CCDC13-201ENST00000310232 TRIM26Q12899 539 aaPredicted RBP21.67■■□□□ 1.06
CCDC13-201ENST00000310232 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
CCDC13-201ENST00000310232 TRIM41Q8WV44 630 aa21.39■■□□□ 1.01
CCDC13-201ENST00000310232 SCAF1Q9H7N4 1312 aaKnown RBP21.29■■□□□ 1
CCDC13-201ENST00000310232 ABCC9O60706 1549 aa21.27■■□□□ 1
CCDC13-201ENST00000310232 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
CCDC13-201ENST00000310232 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
CCDC13-201ENST00000310232 RB1CC1Q8TDY2 1594 aa21.23■□□□□ 0.99
CCDC13-201ENST00000310232 ZEB1P37275 1124 aaPredicted RBP21.15■□□□□ 0.98
CCDC13-201ENST00000310232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.08■□□□□ 0.97
CCDC13-201ENST00000310232 TTBK1Q5TCY1 1321 aaPredicted RBP21.07■□□□□ 0.96
CCDC13-201ENST00000310232 CECR2Q9BXF3 1484 aa20.93■□□□□ 0.94
CCDC13-201ENST00000310232 CCER1Q8TC90 406 aaPredicted RBP20.89■□□□□ 0.93
CCDC13-201ENST00000310232 NEUROD1Q13562 356 aa20.87■□□□□ 0.93
CCDC13-201ENST00000310232 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
CCDC13-201ENST00000310232 PELP1Q8IZL8 1130 aaKnown RBP20.8■□□□□ 0.92
CCDC13-201ENST00000310232 WIZO95785 1651 aa20.77■□□□□ 0.92
CCDC13-201ENST00000310232 ACIN1Q9UKV3 1341 aaKnown RBP20.75■□□□□ 0.91
CCDC13-201ENST00000310232 GTF3C3Q9Y5Q9 886 aa20.69■□□□□ 0.9
CCDC13-201ENST00000310232 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
CCDC13-201ENST00000310232 ABCC8Q09428 1581 aa20.58■□□□□ 0.88
CCDC13-201ENST00000310232 YTHDC1Q96MU7 727 aaKnown RBP20.55■□□□□ 0.88
CCDC13-201ENST00000310232 CCDC88BA6NC98 1476 aa20.51■□□□□ 0.87
CCDC13-201ENST00000310232 SOGA1O94964 1423 aa20.44■□□□□ 0.86
CCDC13-201ENST00000310232 CENPBP07199 599 aaPredicted RBP20.43■□□□□ 0.86
CCDC13-201ENST00000310232 CEP162Q5TB80 1403 aa20.43■□□□□ 0.86
CCDC13-201ENST00000310232 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
CCDC13-201ENST00000310232 RUSC2Q8N2Y8 1516 aa20.4■□□□□ 0.86
CCDC13-201ENST00000310232 UBTFP17480 764 aaKnown RBP20.4■□□□□ 0.86
CCDC13-201ENST00000310232 BAZ1AQ9NRL2 1556 aaPredicted RBP20.39■□□□□ 0.86
CCDC13-201ENST00000310232 HNRNPUL2Q1KMD3 747 aaKnown RBP20.35■□□□□ 0.85
CCDC13-201ENST00000310232 NACADO15069 1562 aa20.33■□□□□ 0.85
CCDC13-201ENST00000310232 ZNF316A6NFI3 1004 aaPredicted RBP20.3■□□□□ 0.84
CCDC13-201ENST00000310232 RANGAP1P46060 587 aaPredicted RBP20.29■□□□□ 0.84
CCDC13-201ENST00000310232 MIER1Q8N108 512 aa20.28■□□□□ 0.84
CCDC13-201ENST00000310232 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.83
CCDC13-201ENST00000310232 CSRNP3Q8WYN3 585 aa20.23■□□□□ 0.83
CCDC13-201ENST00000310232 TNIKQ9UKE5 1360 aa20.19■□□□□ 0.82
CCDC13-201ENST00000310232 SMARCA2P51531 1590 aa20.18■□□□□ 0.82
CCDC13-201ENST00000310232 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
CCDC13-201ENST00000310232 SMARCA4P51532 1647 aa20.1■□□□□ 0.81
CCDC13-201ENST00000310232 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
CCDC13-201ENST00000310232 GOLGA3Q08378 1498 aa20.02■□□□□ 0.8
CCDC13-201ENST00000310232 UNC13AQ9UPW8 1703 aa19.95■□□□□ 0.78
CCDC13-201ENST00000310232 CLIP1P30622 1438 aa19.93■□□□□ 0.78
CCDC13-201ENST00000310232 EEA1Q15075 1411 aa19.9■□□□□ 0.78
CCDC13-201ENST00000310232 SYNJ1O43426 1573 aa19.9■□□□□ 0.78
CCDC13-201ENST00000310232 APLP2Q06481 763 aa19.87■□□□□ 0.77
CCDC13-201ENST00000310232 RAPGEF2Q9Y4G8 1499 aa19.85■□□□□ 0.77
CCDC13-201ENST00000310232 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
CCDC13-201ENST00000310232 VPS8Q8N3P4 1428 aa19.81■□□□□ 0.76
CCDC13-201ENST00000310232 KANK4Q5T7N3 995 aaPredicted RBP19.75■□□□□ 0.75
CCDC13-201ENST00000310232 ITGAEP38570 1179 aa19.74■□□□□ 0.75
CCDC13-201ENST00000310232 KCNH8Q96L42 1107 aa19.73■□□□□ 0.75
CCDC13-201ENST00000310232 SUPT16HQ9Y5B9 1047 aaKnown RBP19.72■□□□□ 0.75
CCDC13-201ENST00000310232 KIF21BO75037 1637 aa19.72■□□□□ 0.75
CCDC13-201ENST00000310232 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
CCDC13-201ENST00000310232 MYT1Q01538 1121 aa19.69■□□□□ 0.74
CCDC13-201ENST00000310232 BICRAQ9NZM4 1560 aa19.62■□□□□ 0.73
CCDC13-201ENST00000310232 BCANQ96GW7 911 aa19.61■□□□□ 0.73
CCDC13-201ENST00000310232 BAZ1BQ9UIG0 1483 aaKnown RBP19.55■□□□□ 0.72
CCDC13-201ENST00000310232 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
CCDC13-201ENST00000310232 TSHZ2Q9NRE2 1034 aa19.54■□□□□ 0.72
CCDC13-201ENST00000310232 ATAD2BQ9ULI0 1458 aa19.51■□□□□ 0.71
CCDC13-201ENST00000310232 HIRIP3Q9BW71 556 aaPredicted RBP19.49■□□□□ 0.71
CCDC13-201ENST00000310232 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
CCDC13-201ENST00000310232 TOP2BQ02880 1626 aa19.42■□□□□ 0.7
CCDC13-201ENST00000310232 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
CCDC13-201ENST00000310232 SIN3AQ96ST3 1273 aa19.41■□□□□ 0.7
CCDC13-201ENST00000310232 CLSPNQ9HAW4 1339 aa19.4■□□□□ 0.7
CCDC13-201ENST00000310232 PRXQ9BXM0 1461 aa19.38■□□□□ 0.69
CCDC13-201ENST00000310232 CCNB3Q8WWL7 1395 aa19.37■□□□□ 0.69
CCDC13-201ENST00000310232 FKBP8Q14318 412 aa19.36■□□□□ 0.69
CCDC13-201ENST00000310232 RAB3GAP2Q9H2M9 1393 aa19.36■□□□□ 0.69
CCDC13-201ENST00000310232 RRBP1Q9P2E9 1410 aaKnown RBP19.36■□□□□ 0.69
CCDC13-201ENST00000310232 TRIM52Q96A61 297 aa19.31■□□□□ 0.68
CCDC13-201ENST00000310232 ARHGAP35Q9NRY4 1499 aa19.31■□□□□ 0.68
CCDC13-201ENST00000310232 MAPKBP1O60336 1514 aa19.3■□□□□ 0.68
CCDC13-201ENST00000310232 P3H3Q8IVL6 736 aa19.3■□□□□ 0.68
CCDC13-201ENST00000310232 ATP1B4Q9UN42 357 aaPredicted RBP19.29■□□□□ 0.68
CCDC13-201ENST00000310232 CUX1P39880 1505 aa19.29■□□□□ 0.68
CCDC13-201ENST00000310232 FAM50AQ14320 339 aaKnown RBP19.29■□□□□ 0.68
CCDC13-201ENST00000310232 BIVM-ERCC5R4GMW8 1640 aa19.28■□□□□ 0.68
CCDC13-201ENST00000310232 ERICH3Q5RHP9 1530 aa19.28■□□□□ 0.68
CCDC13-201ENST00000310232 WDR97A6NE52 1622 aa19.27■□□□□ 0.68
CCDC13-201ENST00000310232 ANP32EQ9BTT0 268 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms