RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 NISCHQ9Y2I1 1504 aa35.81■■■■□ 3.32
SUMO3-203ENST00000397898 CCDC180Q9P1Z9 1646 aa31.54■■■□□ 2.64
SUMO3-203ENST00000397898 ABCC9O60706 1549 aa30.38■■■□□ 2.45
SUMO3-203ENST00000397898 ZCCHC6Q5VYS8 1495 aaKnown RBP29.95■■■□□ 2.39
SUMO3-203ENST00000397898 DCAF8L2P0C7V8 631 aa29.75■■■□□ 2.35
SUMO3-203ENST00000397898 DCAF1Q9Y4B6 1507 aa29.63■■■□□ 2.33
SUMO3-203ENST00000397898 MYO15BQ96JP2 1530 aa29.54■■■□□ 2.32
SUMO3-203ENST00000397898 NACADO15069 1562 aa29.53■■■□□ 2.32
SUMO3-203ENST00000397898 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
SUMO3-203ENST00000397898 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
SUMO3-203ENST00000397898 UNC13AQ9UPW8 1703 aa28.76■■■□□ 2.19
SUMO3-203ENST00000397898 SHROOM4Q9ULL8 1493 aa28.7■■■□□ 2.18
SUMO3-203ENST00000397898 BICRAQ9NZM4 1560 aa28.53■■■□□ 2.16
SUMO3-203ENST00000397898 PABPN1Q86U42 306 aaKnown RBP eCLIP28.51■■■□□ 2.15
SUMO3-203ENST00000397898 CECR2Q9BXF3 1484 aa27.85■■■□□ 2.05
SUMO3-203ENST00000397898 EIF4G1Q04637 1599 aaKnown RBP27.74■■■□□ 2.03
SUMO3-203ENST00000397898 BAZ1AQ9NRL2 1556 aaPredicted RBP27.71■■■□□ 2.03
SUMO3-203ENST00000397898 SMARCA4P51532 1647 aa27.66■■■□□ 2.02
SUMO3-203ENST00000397898 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
SUMO3-203ENST00000397898 RSF1Q96T23 1441 aaPredicted RBP27.51■■■□□ 2
SUMO3-203ENST00000397898 CC2D2AQ9P2K1 1620 aa27.48■■□□□ 1.99
SUMO3-203ENST00000397898 DNAJC5BQ9UF47 199 aa27.38■■□□□ 1.97
SUMO3-203ENST00000397898 ATAD2BQ9ULI0 1458 aa27.37■■□□□ 1.97
SUMO3-203ENST00000397898 PEG3Q9GZU2 1588 aa27.36■■□□□ 1.97
SUMO3-203ENST00000397898 WIZO95785 1651 aa27.35■■□□□ 1.97
SUMO3-203ENST00000397898 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
SUMO3-203ENST00000397898 SUPT5HO00267 1087 aaKnown RBP27.3■■□□□ 1.96
SUMO3-203ENST00000397898 NCAPD3P42695 1498 aa27.26■■□□□ 1.96
SUMO3-203ENST00000397898 BAZ1BQ9UIG0 1483 aaKnown RBP27.18■■□□□ 1.94
SUMO3-203ENST00000397898 HMGXB3Q12766 1538 aa27.17■■□□□ 1.94
SUMO3-203ENST00000397898 TOP2AP11388 1531 aaKnown RBP27.08■■□□□ 1.93
SUMO3-203ENST00000397898 CCDC88BA6NC98 1476 aa26.78■■□□□ 1.88
SUMO3-203ENST00000397898 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
SUMO3-203ENST00000397898 CFTRP13569 1480 aa26.47■■□□□ 1.83
SUMO3-203ENST00000397898 NESP48681 1621 aa26.46■■□□□ 1.83
SUMO3-203ENST00000397898 LAMC3Q9Y6N6 1575 aa26.44■■□□□ 1.82
SUMO3-203ENST00000397898 PRDM2Q13029 1718 aa26.26■■□□□ 1.8
SUMO3-203ENST00000397898 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
SUMO3-203ENST00000397898 FANCD2Q9BXW9 1451 aa26.2■■□□□ 1.79
SUMO3-203ENST00000397898 KIF21AQ7Z4S6 1674 aa26.13■■□□□ 1.77
SUMO3-203ENST00000397898 ERCC6Q03468 1493 aa26.13■■□□□ 1.77
SUMO3-203ENST00000397898 CEP164Q9UPV0 1460 aa26.12■■□□□ 1.77
SUMO3-203ENST00000397898 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
SUMO3-203ENST00000397898 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
SUMO3-203ENST00000397898 WRNQ14191 1432 aaPredicted RBP eCLIP25.93■■□□□ 1.74
SUMO3-203ENST00000397898 URB2Q14146 1524 aaKnown RBP25.91■■□□□ 1.74
SUMO3-203ENST00000397898 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
SUMO3-203ENST00000397898 CUX1P39880 1505 aa25.87■■□□□ 1.73
SUMO3-203ENST00000397898 DNMBPQ6XZF7 1577 aa25.85■■□□□ 1.73
SUMO3-203ENST00000397898 TOPBP1Q92547 1522 aa25.85■■□□□ 1.73
SUMO3-203ENST00000397898 WDR62O43379 1518 aa25.84■■□□□ 1.73
SUMO3-203ENST00000397898 SYNJ1O43426 1573 aa25.83■■□□□ 1.73
SUMO3-203ENST00000397898 CHIC1Q5VXU3 224 aa25.79■■□□□ 1.72
SUMO3-203ENST00000397898 TOP2BQ02880 1626 aa25.79■■□□□ 1.72
SUMO3-203ENST00000397898 BIVM-ERCC5R4GMW8 1640 aa25.77■■□□□ 1.72
SUMO3-203ENST00000397898 TRIM41Q8WV44 630 aa25.74■■□□□ 1.71
SUMO3-203ENST00000397898 FGD5Q6ZNL6 1462 aa25.7■■□□□ 1.7
SUMO3-203ENST00000397898 POLA1P09884 1462 aaPredicted RBP25.67■■□□□ 1.7
SUMO3-203ENST00000397898 CUX2O14529 1486 aa25.61■■□□□ 1.69
SUMO3-203ENST00000397898 SOGA1O94964 1423 aa25.59■■□□□ 1.69
SUMO3-203ENST00000397898 RAD54L2Q9Y4B4 1467 aa25.57■■□□□ 1.68
SUMO3-203ENST00000397898 IFT140Q96RY7 1462 aa25.53■■□□□ 1.68
SUMO3-203ENST00000397898 TARBP1Q13395 1621 aaKnown RBP25.51■■□□□ 1.67
SUMO3-203ENST00000397898 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
SUMO3-203ENST00000397898 WDR97A6NE52 1622 aa25.42■■□□□ 1.66
SUMO3-203ENST00000397898 ZNF608Q9ULD9 1512 aaPredicted RBP25.4■■□□□ 1.66
SUMO3-203ENST00000397898 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
SUMO3-203ENST00000397898 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.653e-7■■■□□ 16.9
SUMO3-203ENST00000397898 KIF27Q86VH2 1401 aa25.34■■□□□ 1.65
SUMO3-203ENST00000397898 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
SUMO3-203ENST00000397898 ABCA5Q8WWZ7 1642 aa25.31■■□□□ 1.64
SUMO3-203ENST00000397898 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
SUMO3-203ENST00000397898 GAPVD1Q14C86 1478 aa25.3■■□□□ 1.64
SUMO3-203ENST00000397898 EEA1Q15075 1411 aa25.22■■□□□ 1.63
SUMO3-203ENST00000397898 FAM9AQ8IZU1 332 aaPredicted RBP25.21■■□□□ 1.63
SUMO3-203ENST00000397898 GRIN2BQ13224 1484 aa25.2■■□□□ 1.63
SUMO3-203ENST00000397898 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
SUMO3-203ENST00000397898 IGF1RP08069 1367 aa25.17■■□□□ 1.62
SUMO3-203ENST00000397898 ERICH3Q5RHP9 1530 aa25.16■■□□□ 1.62
SUMO3-203ENST00000397898 CSRNP3Q8WYN3 585 aa25.13■■□□□ 1.61
SUMO3-203ENST00000397898 SNAPC4Q5SXM2 1469 aa25.1■■□□□ 1.61
SUMO3-203ENST00000397898 MAGI1Q96QZ7 1491 aaPredicted RBP25.07■■□□□ 1.6
SUMO3-203ENST00000397898 CARMIL1Q5VZK9 1371 aa25.04■■□□□ 1.6
SUMO3-203ENST00000397898 CUL7Q14999 1698 aa25.04■■□□□ 1.6
SUMO3-203ENST00000397898 ADAMTS12P58397 1594 aa25.02■■□□□ 1.6
SUMO3-203ENST00000397898 FHAD1B1AJZ9 1412 aa25.01■■□□□ 1.59
SUMO3-203ENST00000397898 PRXQ9BXM0 1461 aa25■■□□□ 1.59
SUMO3-203ENST00000397898 SYNJ2O15056 1496 aa24.97■■□□□ 1.59
SUMO3-203ENST00000397898 CHMP7Q8WUX9 453 aaPredicted RBP24.95■■□□□ 1.58
SUMO3-203ENST00000397898 RAPGEF2Q9Y4G8 1499 aa24.94■■□□□ 1.58
SUMO3-203ENST00000397898 FBLN2P98095 1184 aa24.93■■□□□ 1.58
SUMO3-203ENST00000397898 KIF21BO75037 1637 aa24.91■■□□□ 1.58
SUMO3-203ENST00000397898 GRIN2AQ12879 1464 aa24.89■■□□□ 1.57
SUMO3-203ENST00000397898 EHMT2Q96KQ7 1210 aa24.86■■□□□ 1.57
SUMO3-203ENST00000397898 CHD1O14646 1710 aa24.86■■□□□ 1.57
SUMO3-203ENST00000397898 GOLGA3Q08378 1498 aa24.83■■□□□ 1.57
SUMO3-203ENST00000397898 LOC105371045A0A1W2PR82 267 aa24.77■■□□□ 1.56
SUMO3-203ENST00000397898 UBTFP17480 764 aaKnown RBP24.75■■□□□ 1.55
SUMO3-203ENST00000397898 NUP160Q12769 1436 aa24.74■■□□□ 1.55
SUMO3-203ENST00000397898 CEP170Q5SW79 1584 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms