RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 NISCHQ9Y2I1 1504 aa26.02■■□□□ 1.76
AP001999.1-201ENST00000513405 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
AP001999.1-201ENST00000513405 SHROOM4Q9ULL8 1493 aa24.16■■□□□ 1.46
AP001999.1-201ENST00000513405 SUPT5HO00267 1087 aaKnown RBP23.98■■□□□ 1.43
AP001999.1-201ENST00000513405 EHMT2Q96KQ7 1210 aa22.87■■□□□ 1.25
AP001999.1-201ENST00000513405 PCGF6Q9BYE7 350 aa22.67■■□□□ 1.22
AP001999.1-201ENST00000513405 FAM9AQ8IZU1 332 aaPredicted RBP22.46■■□□□ 1.19
AP001999.1-201ENST00000513405 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
AP001999.1-201ENST00000513405 LOC105371045A0A1W2PR82 267 aa22.38■■□□□ 1.17
AP001999.1-201ENST00000513405 PPARGC1BQ86YN6 1023 aaKnown RBP22.2■■□□□ 1.15
AP001999.1-201ENST00000513405 TTBK1Q5TCY1 1321 aaPredicted RBP22.03■■□□□ 1.12
AP001999.1-201ENST00000513405 HRCP23327 699 aa22.01■■□□□ 1.11
AP001999.1-201ENST00000513405 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
AP001999.1-201ENST00000513405 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
AP001999.1-201ENST00000513405 ZCCHC6Q5VYS8 1495 aaKnown RBP21.8■■□□□ 1.08
AP001999.1-201ENST00000513405 TRIM26Q12899 539 aaPredicted RBP21.55■■□□□ 1.04
AP001999.1-201ENST00000513405 RANGAP1P46060 587 aaPredicted RBP21.5■■□□□ 1.03
AP001999.1-201ENST00000513405 ABCC9O60706 1549 aa21.38■■□□□ 1.01
AP001999.1-201ENST00000513405 CCER1Q8TC90 406 aaPredicted RBP21.3■■□□□ 1
AP001999.1-201ENST00000513405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.26■□□□□ 0.99
AP001999.1-201ENST00000513405 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
AP001999.1-201ENST00000513405 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
AP001999.1-201ENST00000513405 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
AP001999.1-201ENST00000513405 PABPN1Q86U42 306 aaKnown RBP eCLIP21.09■□□□□ 0.97
AP001999.1-201ENST00000513405 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
AP001999.1-201ENST00000513405 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
AP001999.1-201ENST00000513405 YTHDC1Q96MU7 727 aaKnown RBP20.96■□□□□ 0.95
AP001999.1-201ENST00000513405 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
AP001999.1-201ENST00000513405 HNRNPUL2Q1KMD3 747 aaKnown RBP20.9■□□□□ 0.94
AP001999.1-201ENST00000513405 APLP2Q06481 763 aa20.85■□□□□ 0.93
AP001999.1-201ENST00000513405 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
AP001999.1-201ENST00000513405 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
AP001999.1-201ENST00000513405 ITGAEP38570 1179 aa20.64■□□□□ 0.9
AP001999.1-201ENST00000513405 DIEXFQ68CQ4 756 aaKnown RBP20.64■□□□□ 0.89
AP001999.1-201ENST00000513405 ATP1B4Q9UN42 357 aaPredicted RBP20.59■□□□□ 0.89
AP001999.1-201ENST00000513405 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
AP001999.1-201ENST00000513405 CENPBP07199 599 aaPredicted RBP20.53■□□□□ 0.88
AP001999.1-201ENST00000513405 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
AP001999.1-201ENST00000513405 MROH2BQ7Z745 1585 aa20.49■□□□□ 0.87
AP001999.1-201ENST00000513405 GTF3C3Q9Y5Q9 886 aa20.45■□□□□ 0.86
AP001999.1-201ENST00000513405 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
AP001999.1-201ENST00000513405 PELP1Q8IZL8 1130 aaKnown RBP20.36■□□□□ 0.85
AP001999.1-201ENST00000513405 SOGA1O94964 1423 aa20.31■□□□□ 0.84
AP001999.1-201ENST00000513405 ACIN1Q9UKV3 1341 aaKnown RBP20.29■□□□□ 0.84
AP001999.1-201ENST00000513405 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
AP001999.1-201ENST00000513405 WIZO95785 1651 aa20.29■□□□□ 0.84
AP001999.1-201ENST00000513405 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
AP001999.1-201ENST00000513405 ZNF316A6NFI3 1004 aaPredicted RBP20.22■□□□□ 0.83
AP001999.1-201ENST00000513405 CEP162Q5TB80 1403 aa20.21■□□□□ 0.83
AP001999.1-201ENST00000513405 P3H3Q8IVL6 736 aa20.15■□□□□ 0.82
AP001999.1-201ENST00000513405 RUSC2Q8N2Y8 1516 aa20.12■□□□□ 0.81
AP001999.1-201ENST00000513405 MIER1Q8N108 512 aa20.12■□□□□ 0.81
AP001999.1-201ENST00000513405 NACADO15069 1562 aa20.1■□□□□ 0.81
AP001999.1-201ENST00000513405 FAM50AQ14320 339 aaKnown RBP20.02■□□□□ 0.8
AP001999.1-201ENST00000513405 BAZ1AQ9NRL2 1556 aaPredicted RBP19.97■□□□□ 0.79
AP001999.1-201ENST00000513405 WRNQ14191 1432 aaPredicted RBP eCLIP19.96■□□□□ 0.79
AP001999.1-201ENST00000513405 CLIP1P30622 1438 aa19.95■□□□□ 0.78
AP001999.1-201ENST00000513405 CNGB1Q14028 1251 aaPredicted RBP19.94■□□□□ 0.78
AP001999.1-201ENST00000513405 TNIKQ9UKE5 1360 aa19.94■□□□□ 0.78
AP001999.1-201ENST00000513405 BCANQ96GW7 911 aa19.92■□□□□ 0.78
AP001999.1-201ENST00000513405 HIRIP3Q9BW71 556 aaPredicted RBP19.91■□□□□ 0.78
AP001999.1-201ENST00000513405 ARID3CA6NKF2 412 aa19.87■□□□□ 0.77
AP001999.1-201ENST00000513405 GOLGA3Q08378 1498 aa19.83■□□□□ 0.76
AP001999.1-201ENST00000513405 KANK4Q5T7N3 995 aaPredicted RBP19.82■□□□□ 0.76
AP001999.1-201ENST00000513405 DDX10Q13206 875 aaKnown RBP19.7■□□□□ 0.74
AP001999.1-201ENST00000513405 TOP2AP11388 1531 aaKnown RBP19.7■□□□□ 0.74
AP001999.1-201ENST00000513405 BAZ1BQ9UIG0 1483 aaKnown RBP19.69■□□□□ 0.74
AP001999.1-201ENST00000513405 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
AP001999.1-201ENST00000513405 POLR3GLQ9BT43 218 aa19.65■□□□□ 0.74
AP001999.1-201ENST00000513405 EEA1Q15075 1411 aa19.64■□□□□ 0.74
AP001999.1-201ENST00000513405 SMARCA4P51532 1647 aa19.64■□□□□ 0.74
AP001999.1-201ENST00000513405 CEP164Q9UPV0 1460 aa19.64■□□□□ 0.73
AP001999.1-201ENST00000513405 SIN3AQ96ST3 1273 aa19.63■□□□□ 0.73
AP001999.1-201ENST00000513405 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
AP001999.1-201ENST00000513405 TRIM52Q96A61 297 aa19.56■□□□□ 0.72
AP001999.1-201ENST00000513405 KCNH8Q96L42 1107 aa19.55■□□□□ 0.72
AP001999.1-201ENST00000513405 NEFLP07196 543 aa19.54■□□□□ 0.72
AP001999.1-201ENST00000513405 VPS8Q8N3P4 1428 aa19.54■□□□□ 0.72
AP001999.1-201ENST00000513405 CHIC2Q9UKJ5 165 aa19.52■□□□□ 0.72
AP001999.1-201ENST00000513405 SENP3-EIF4A1A0A087X0R7 540 aa19.46■□□□□ 0.71
AP001999.1-201ENST00000513405 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
AP001999.1-201ENST00000513405 FKBP8Q14318 412 aa19.45■□□□□ 0.7
AP001999.1-201ENST00000513405 ZNF326Q5BKZ1 582 aaKnown RBP19.4■□□□□ 0.7
AP001999.1-201ENST00000513405 ERICH6Q7L0X2 663 aa19.39■□□□□ 0.69
AP001999.1-201ENST00000513405 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.69
AP001999.1-201ENST00000513405 MYT1Q01538 1121 aa19.38■□□□□ 0.69
AP001999.1-201ENST00000513405 KIF27Q86VH2 1401 aa19.38■□□□□ 0.69
AP001999.1-201ENST00000513405 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
AP001999.1-201ENST00000513405 ANP32CO43423 234 aa19.37■□□□□ 0.69
AP001999.1-201ENST00000513405 RRP7BPQ9NSQ0 103 aa19.35■□□□□ 0.69
AP001999.1-201ENST00000513405 CCNB3Q8WWL7 1395 aa19.34■□□□□ 0.69
AP001999.1-201ENST00000513405 CUX2O14529 1486 aa19.32■□□□□ 0.68
AP001999.1-201ENST00000513405 DHX57Q6P158 1386 aaKnown RBP19.32■□□□□ 0.68
AP001999.1-201ENST00000513405 FBLN2P98095 1184 aa19.31■□□□□ 0.68
AP001999.1-201ENST00000513405 SUPT16HQ9Y5B9 1047 aaKnown RBP19.31■□□□□ 0.68
AP001999.1-201ENST00000513405 RAB3GAP2Q9H2M9 1393 aa19.26■□□□□ 0.67
AP001999.1-201ENST00000513405 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
AP001999.1-201ENST00000513405 TONSLQ96HA7 1378 aa19.23■□□□□ 0.67
AP001999.1-201ENST00000513405 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
AP001999.1-201ENST00000513405 HNRNPUQ00839 825 aaKnown RBP eCLIP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms