Protein–RNA interactions for Protein: P10155

TROVE2, 60 kDa SS-A/Ro ribonucleoprotein, humanhuman

Known RBP eCLIP

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2P10155 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.36e-7■■□□□ 11.9
TROVE2P10155 PIGZ-201ENST00000238138 868 ntTSL 222.26■■□□□ 1.153e-7■■□□□ 11.9
TROVE2P10155 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.563e-7■■□□□ 11.9
TROVE2P10155 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.22□□□□□ -0.133e-7■■□□□ 11.9
TROVE2P10155 SNORD65B-201ENST00000459126 73 ntBASIC0.81□□□□□ -2.281e-323■■□□□ 11.9
TROVE2P10155 ARHGAP4-223ENST00000494397 1752 ntTSL 522.78■■□□□ 1.245e-8■■□□□ 11.8
TROVE2P10155 ARHGAP4-222ENST00000494302 2667 ntTSL 518.67■□□□□ 0.585e-8■■□□□ 11.8
TROVE2P10155 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.95■□□□□ 0.465e-8■■□□□ 11.8
TROVE2P10155 ARHGAP4-207ENST00000420383 2817 ntTSL 217.58■□□□□ 0.45e-8■■□□□ 11.8
TROVE2P10155 ARHGAP4-205ENST00000404127 3232 ntTSL 517.39■□□□□ 0.375e-8■■□□□ 11.8
TROVE2P10155 ARHGAP4-219ENST00000470209 2889 ntTSL 517.2■□□□□ 0.345e-8■■□□□ 11.8
TROVE2P10155 ARHGAP4-217ENST00000466928 840 ntTSL 216.35■□□□□ 0.215e-8■■□□□ 11.8
TROVE2P10155 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.15e-8■■□□□ 11.8
TROVE2P10155 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.085e-8■■□□□ 11.8
TROVE2P10155 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.045e-8■■□□□ 11.8
TROVE2P10155 L1CAM-212ENST00000464967 593 ntTSL 210.6□□□□□ -0.715e-8■■□□□ 11.8
TROVE2P10155 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.283e-6■■□□□ 11.8
TROVE2P10155 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.213e-6■■□□□ 11.8
TROVE2P10155 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.183e-6■■□□□ 11.8
TROVE2P10155 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.063e-6■■□□□ 11.8
TROVE2P10155 CAPRIN1-205ENST00000528856 595 ntTSL 521.42■■□□□ 1.023e-6■■□□□ 11.8
TROVE2P10155 CAPRIN1-203ENST00000526477 587 ntTSL 221.42■■□□□ 1.023e-6■■□□□ 11.8
TROVE2P10155 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.983e-6■■□□□ 11.8
TROVE2P10155 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.935e-12■■□□□ 11.8
TROVE2P10155 ZNF444-206ENST00000587664 568 ntTSL 320.69■□□□□ 0.93e-6■■□□□ 11.8
TROVE2P10155 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.833e-6■■□□□ 11.8
TROVE2P10155 ZNF444-203ENST00000587195 571 ntTSL 420.15■□□□□ 0.823e-6■■□□□ 11.8
TROVE2P10155 HPCAL1-205ENST00000423674 586 ntTSL 420.09■□□□□ 0.815e-12■■□□□ 11.8
TROVE2P10155 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.65■□□□□ 0.743e-6■■□□□ 11.8
TROVE2P10155 POLR3E-204ENST00000561494 575 ntTSL 319.55■□□□□ 0.723e-6■■□□□ 11.8
TROVE2P10155 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.73e-6■■□□□ 11.8
TROVE2P10155 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.37■□□□□ 0.693e-6■■□□□ 11.8
TROVE2P10155 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.623e-6■■□□□ 11.8
TROVE2P10155 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.89■□□□□ 0.613e-6■■□□□ 11.8
TROVE2P10155 FADS1-208ENST00000473263 574 ntTSL 418.54■□□□□ 0.563e-6■■□□□ 11.8
TROVE2P10155 LMAN2-207ENST00000514458 616 ntTSL 518.49■□□□□ 0.553e-6■■□□□ 11.8
TROVE2P10155 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.523e-6■■□□□ 11.8
TROVE2P10155 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.29■□□□□ 0.523e-6■■□□□ 11.8
TROVE2P10155 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.12■□□□□ 0.493e-6■■□□□ 11.8
TROVE2P10155 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.445e-12■■□□□ 11.8
TROVE2P10155 EIF4A1-216ENST00000580888 710 ntTSL 217.71■□□□□ 0.434e-6■■□□□ 11.8
TROVE2P10155 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.421e-7■■□□□ 11.8
TROVE2P10155 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.65■□□□□ 0.423e-6■■□□□ 11.8
TROVE2P10155 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.49■□□□□ 0.391e-7■■□□□ 11.8
TROVE2P10155 FADS1-215ENST00000541683 1844 ntTSL 217.49■□□□□ 0.393e-6■■□□□ 11.8
TROVE2P10155 LMAN2-204ENST00000504071 562 ntTSL 217.42■□□□□ 0.383e-6■■□□□ 11.8
TROVE2P10155 POLR3E-205ENST00000563024 473 ntTSL 417.4■□□□□ 0.383e-6■■□□□ 11.8
TROVE2P10155 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.36■□□□□ 0.373e-6■■□□□ 11.8
TROVE2P10155 POLR3E-214ENST00000565358 565 ntTSL 417.29■□□□□ 0.363e-6■■□□□ 11.8
TROVE2P10155 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.21■□□□□ 0.353e-6■■□□□ 11.8
TROVE2P10155 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.243e-6■■□□□ 11.8
TROVE2P10155 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.233e-6■■□□□ 11.8
TROVE2P10155 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.41■□□□□ 0.224e-6■■□□□ 11.8
TROVE2P10155 GIGYF1-202ENST00000464111 656 ntTSL 316.37■□□□□ 0.215e-12■■□□□ 11.8
TROVE2P10155 CLASRP-202ENST00000391952 2213 ntTSL 1 (best)16.17■□□□□ 0.183e-6■■□□□ 11.8
TROVE2P10155 FADS1-202ENST00000421879 583 ntTSL 316■□□□□ 0.153e-6■■□□□ 11.8
TROVE2P10155 CAPRIN1-217ENST00000534825 668 ntTSL 315.99■□□□□ 0.153e-6■■□□□ 11.8
TROVE2P10155 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.79■□□□□ 0.123e-6■■□□□ 11.8
TROVE2P10155 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.114e-6■■□□□ 11.8
TROVE2P10155 FADS1-217ENST00000544309 581 ntTSL 315.71■□□□□ 0.113e-6■■□□□ 11.8
TROVE2P10155 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.13e-6■■□□□ 11.8
TROVE2P10155 EIF4A1-208ENST00000578476 573 ntTSL 215.53■□□□□ 0.084e-6■■□□□ 11.8
TROVE2P10155 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.075e-12■■□□□ 11.8
TROVE2P10155 POLR3E-212ENST00000564883 560 ntTSL 415.35■□□□□ 0.053e-6■■□□□ 11.8
TROVE2P10155 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.26■□□□□ 0.033e-6■■□□□ 11.8
TROVE2P10155 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.013e-6■■□□□ 11.8
TROVE2P10155 GIGYF1-203ENST00000471340 478 ntTSL 514.42□□□□□ -0.15e-12■■□□□ 11.8
TROVE2P10155 TRAPPC12-209ENST00000441099 698 ntTSL 314.33□□□□□ -0.123e-6■■□□□ 11.8
TROVE2P10155 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.133e-6■■□□□ 11.8
TROVE2P10155 CAPRIN1-216ENST00000534042 574 ntTSL 514.17□□□□□ -0.143e-6■■□□□ 11.8
TROVE2P10155 TRAPPC12-210ENST00000441983 683 ntTSL 314.17□□□□□ -0.143e-6■■□□□ 11.8
TROVE2P10155 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.08□□□□□ -0.163e-6■■□□□ 11.8
TROVE2P10155 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.171e-7■■□□□ 11.8
TROVE2P10155 FADS1-207ENST00000466716 640 ntTSL 513.98□□□□□ -0.173e-6■■□□□ 11.8
TROVE2P10155 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.96□□□□□ -0.173e-6■■□□□ 11.8
TROVE2P10155 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.191e-7■■□□□ 11.8
TROVE2P10155 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.193e-6■■□□□ 11.8
TROVE2P10155 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.233e-6■■□□□ 11.8
TROVE2P10155 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC13.54□□□□□ -0.243e-6■■□□□ 11.8
TROVE2P10155 POLR3E-208ENST00000564061 4800 ntTSL 1 (best)13.52□□□□□ -0.243e-6■■□□□ 11.8
TROVE2P10155 FADS1-209ENST00000491310 525 ntTSL 513.44□□□□□ -0.263e-6■■□□□ 11.8
TROVE2P10155 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.283e-6■■□□□ 11.8
TROVE2P10155 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC13.15□□□□□ -0.33e-6■■□□□ 11.8
TROVE2P10155 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.323e-6■■□□□ 11.8
TROVE2P10155 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.99□□□□□ -0.333e-6■■□□□ 11.8
TROVE2P10155 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC12.94□□□□□ -0.343e-6■■□□□ 11.8
TROVE2P10155 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC12.93□□□□□ -0.343e-6■■□□□ 11.8
TROVE2P10155 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.393e-6■■□□□ 11.8
TROVE2P10155 BCOR-207ENST00000412952 288 ntTSL 512.56□□□□□ -0.43e-6■■□□□ 11.8
TROVE2P10155 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.43e-6■■□□□ 11.8
TROVE2P10155 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC12.51□□□□□ -0.413e-6■■□□□ 11.8
TROVE2P10155 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.16□□□□□ -0.463e-6■■□□□ 11.8
TROVE2P10155 EIF4A1-214ENST00000580461 909 ntTSL 212.03□□□□□ -0.484e-6■■□□□ 11.8
TROVE2P10155 TRAPPC12-206ENST00000417243 1047 ntTSL 511.96□□□□□ -0.493e-6■■□□□ 11.8
TROVE2P10155 TRAPPC12-218ENST00000479897 454 ntTSL 311.96□□□□□ -0.493e-6■■□□□ 11.8
TROVE2P10155 FADS1-205ENST00000448607 559 ntTSL 411.94□□□□□ -0.53e-6■■□□□ 11.8
TROVE2P10155 FADS1-214ENST00000540767 742 ntTSL 311.94□□□□□ -0.53e-6■■□□□ 11.8
TROVE2P10155 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC11.79□□□□□ -0.524e-6■■□□□ 11.8
TROVE2P10155 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC11.73□□□□□ -0.533e-6■■□□□ 11.8
TROVE2P10155 FADS1-203ENST00000424501 926 ntTSL 311.7□□□□□ -0.543e-6■■□□□ 11.8
Retrieved 100 of 4,203 protein–RNA pairs in 75.3 ms