RNA–Protein interactions for RNA: ENST00000350060.9

ARHGAP4-201, Transcript of Rho GTPase activating protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGAP4, Length 3,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP4-201ENST00000350060 NISCHQ9Y2I1 1504 aa30.26■■■□□ 2.44
ARHGAP4-201ENST00000350060 SHROOM4Q9ULL8 1493 aa26.03■■□□□ 1.76
ARHGAP4-201ENST00000350060 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
ARHGAP4-201ENST00000350060 CCDC180Q9P1Z9 1646 aa25.68■■□□□ 1.7
ARHGAP4-201ENST00000350060 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
ARHGAP4-201ENST00000350060 SUPT5HO00267 1087 aaKnown RBP25.4■■□□□ 1.66
ARHGAP4-201ENST00000350060 DCAF1Q9Y4B6 1507 aa24.64■■□□□ 1.53
ARHGAP4-201ENST00000350060 ABCC9O60706 1549 aa24.51■■□□□ 1.51
ARHGAP4-201ENST00000350060 SCRIBQ14160 1630 aa24.34■■□□□ 1.49
ARHGAP4-201ENST00000350060 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
ARHGAP4-201ENST00000350060 MYO15BQ96JP2 1530 aa24.07■■□□□ 1.44
ARHGAP4-201ENST00000350060 NACADO15069 1562 aa23.93■■□□□ 1.42
ARHGAP4-201ENST00000350060 RSF1Q96T23 1441 aaPredicted RBP23.91■■□□□ 1.42
ARHGAP4-201ENST00000350060 CECR2Q9BXF3 1484 aa23.77■■□□□ 1.4
ARHGAP4-201ENST00000350060 LOC105371045A0A1W2PR82 267 aa23.74■■□□□ 1.39
ARHGAP4-201ENST00000350060 RB1CC1Q8TDY2 1594 aa23.66■■□□□ 1.38
ARHGAP4-201ENST00000350060 MROH2BQ7Z745 1585 aa23.59■■□□□ 1.37
ARHGAP4-201ENST00000350060 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
ARHGAP4-201ENST00000350060 FAM9AQ8IZU1 332 aaPredicted RBP23.56■■□□□ 1.36
ARHGAP4-201ENST00000350060 EHMT2Q96KQ7 1210 aa23.53■■□□□ 1.36
ARHGAP4-201ENST00000350060 PABPN1Q86U42 306 aaKnown RBP eCLIP23.52■■□□□ 1.35
ARHGAP4-201ENST00000350060 WIZO95785 1651 aa23.42■■□□□ 1.34
ARHGAP4-201ENST00000350060 PCGF6Q9BYE7 350 aa23.42■■□□□ 1.34
ARHGAP4-201ENST00000350060 BAZ1AQ9NRL2 1556 aaPredicted RBP23.26■■□□□ 1.31
ARHGAP4-201ENST00000350060 UNC13AQ9UPW8 1703 aa23.17■■□□□ 1.3
ARHGAP4-201ENST00000350060 SMARCA4P51532 1647 aa23.09■■□□□ 1.29
ARHGAP4-201ENST00000350060 HRCP23327 699 aa23■■□□□ 1.27
ARHGAP4-201ENST00000350060 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
ARHGAP4-201ENST00000350060 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
ARHGAP4-201ENST00000350060 TOP2AP11388 1531 aaKnown RBP22.98■■□□□ 1.27
ARHGAP4-201ENST00000350060 PELP1Q8IZL8 1130 aaKnown RBP22.9■■□□□ 1.26
ARHGAP4-201ENST00000350060 ABCC8Q09428 1581 aa22.89■■□□□ 1.25
ARHGAP4-201ENST00000350060 TRIM26Q12899 539 aaPredicted RBP22.87■■□□□ 1.25
ARHGAP4-201ENST00000350060 PPARGC1BQ86YN6 1023 aaKnown RBP22.86■■□□□ 1.25
ARHGAP4-201ENST00000350060 SMARCA2P51531 1590 aa22.86■■□□□ 1.25
ARHGAP4-201ENST00000350060 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
ARHGAP4-201ENST00000350060 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
ARHGAP4-201ENST00000350060 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
ARHGAP4-201ENST00000350060 SOGA1O94964 1423 aa22.65■■□□□ 1.22
ARHGAP4-201ENST00000350060 BAZ1BQ9UIG0 1483 aaKnown RBP22.63■■□□□ 1.21
ARHGAP4-201ENST00000350060 UBTFP17480 764 aaKnown RBP22.58■■□□□ 1.2
ARHGAP4-201ENST00000350060 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
ARHGAP4-201ENST00000350060 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.2
ARHGAP4-201ENST00000350060 CSRNP3Q8WYN3 585 aa22.52■■□□□ 1.2
ARHGAP4-201ENST00000350060 PEG3Q9GZU2 1588 aa22.51■■□□□ 1.19
ARHGAP4-201ENST00000350060 MYT1Q01538 1121 aa22.48■■□□□ 1.19
ARHGAP4-201ENST00000350060 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
ARHGAP4-201ENST00000350060 CEP162Q5TB80 1403 aa22.36■■□□□ 1.17
ARHGAP4-201ENST00000350060 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
ARHGAP4-201ENST00000350060 EEA1Q15075 1411 aa22.29■■□□□ 1.16
ARHGAP4-201ENST00000350060 TNIKQ9UKE5 1360 aa22.27■■□□□ 1.16
ARHGAP4-201ENST00000350060 GOLGA3Q08378 1498 aa22.22■■□□□ 1.15
ARHGAP4-201ENST00000350060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.14
ARHGAP4-201ENST00000350060 NCAPD3P42695 1498 aa22.2■■□□□ 1.14
ARHGAP4-201ENST00000350060 ZEB1P37275 1124 aaPredicted RBP22.15■■□□□ 1.14
ARHGAP4-201ENST00000350060 CCER1Q8TC90 406 aaPredicted RBP22.12■■□□□ 1.13
ARHGAP4-201ENST00000350060 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
ARHGAP4-201ENST00000350060 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
ARHGAP4-201ENST00000350060 RAPGEF2Q9Y4G8 1499 aa22.07■■□□□ 1.12
ARHGAP4-201ENST00000350060 CLIP1P30622 1438 aa22.04■■□□□ 1.12
ARHGAP4-201ENST00000350060 TOP2BQ02880 1626 aa22■■□□□ 1.11
ARHGAP4-201ENST00000350060 APLP2Q06481 763 aa21.99■■□□□ 1.11
ARHGAP4-201ENST00000350060 CUX1P39880 1505 aa21.96■■□□□ 1.11
ARHGAP4-201ENST00000350060 CFTRP13569 1480 aa21.96■■□□□ 1.11
ARHGAP4-201ENST00000350060 KIF21BO75037 1637 aa21.94■■□□□ 1.1
ARHGAP4-201ENST00000350060 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
ARHGAP4-201ENST00000350060 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
ARHGAP4-201ENST00000350060 CADPSQ9ULU8 1353 aa21.87■■□□□ 1.09
ARHGAP4-201ENST00000350060 BIVM-ERCC5R4GMW8 1640 aa21.86■■□□□ 1.09
ARHGAP4-201ENST00000350060 KIF27Q86VH2 1401 aa21.85■■□□□ 1.09
ARHGAP4-201ENST00000350060 VPS8Q8N3P4 1428 aa21.81■■□□□ 1.08
ARHGAP4-201ENST00000350060 CUX2O14529 1486 aa21.77■■□□□ 1.08
ARHGAP4-201ENST00000350060 PRXQ9BXM0 1461 aa21.76■■□□□ 1.07
ARHGAP4-201ENST00000350060 DNAJC5BQ9UF47 199 aa21.7■■□□□ 1.06
ARHGAP4-201ENST00000350060 NESP48681 1621 aa21.69■■□□□ 1.06
ARHGAP4-201ENST00000350060 FGD5Q6ZNL6 1462 aa21.68■■□□□ 1.06
ARHGAP4-201ENST00000350060 FANCD2Q9BXW9 1451 aa21.67■■□□□ 1.06
ARHGAP4-201ENST00000350060 KANK4Q5T7N3 995 aaPredicted RBP21.65■■□□□ 1.06
ARHGAP4-201ENST00000350060 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
ARHGAP4-201ENST00000350060 IGF1RP08069 1367 aa21.64■■□□□ 1.05
ARHGAP4-201ENST00000350060 P3H3Q8IVL6 736 aa21.63■■□□□ 1.05
ARHGAP4-201ENST00000350060 ARAP1Q96P48 1450 aa21.61■■□□□ 1.05
ARHGAP4-201ENST00000350060 ATP1B4Q9UN42 357 aaPredicted RBP21.61■■□□□ 1.05
ARHGAP4-201ENST00000350060 CARMIL1Q5VZK9 1371 aa21.6■■□□□ 1.05
ARHGAP4-201ENST00000350060 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.04
ARHGAP4-201ENST00000350060 ITGAEP38570 1179 aa21.56■■□□□ 1.04
ARHGAP4-201ENST00000350060 PRDM2Q13029 1718 aa21.51■■□□□ 1.03
ARHGAP4-201ENST00000350060 ARHGAP35Q9NRY4 1499 aa21.5■■□□□ 1.03
ARHGAP4-201ENST00000350060 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
ARHGAP4-201ENST00000350060 POLA1P09884 1462 aaPredicted RBP21.44■■□□□ 1.02
ARHGAP4-201ENST00000350060 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
ARHGAP4-201ENST00000350060 DIEXFQ68CQ4 756 aaKnown RBP21.4■■□□□ 1.02
ARHGAP4-201ENST00000350060 DNMBPQ6XZF7 1577 aa21.39■■□□□ 1.01
ARHGAP4-201ENST00000350060 URB2Q14146 1524 aaKnown RBP21.33■■□□□ 1.01
ARHGAP4-201ENST00000350060 FHOD3Q2V2M9 1422 aa21.31■■□□□ 1
ARHGAP4-201ENST00000350060 ABCA10Q8WWZ4 1543 aa21.3■■□□□ 1
ARHGAP4-201ENST00000350060 PRKCSHP14314 528 aaPredicted RBP21.3■■□□□ 1
ARHGAP4-201ENST00000350060 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
ARHGAP4-201ENST00000350060 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
ARHGAP4-201ENST00000350060 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms