RNA–Protein interactions for RNA: ENST00000541683.1

FADS1-215, Transcript of fatty acid desaturase 1, humanhuman

TSL 2

Gene FADS1, Length 1,844 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FADS1-215ENST00000541683 NISCHQ9Y2I1 1504 aa38.29■■■■□ 3.72
FADS1-215ENST00000541683 CCDC180Q9P1Z9 1646 aa33.25■■■□□ 2.91
FADS1-215ENST00000541683 ZCCHC6Q5VYS8 1495 aaKnown RBP32.25■■■□□ 2.75
FADS1-215ENST00000541683 DCAF1Q9Y4B6 1507 aa31.69■■■□□ 2.66
FADS1-215ENST00000541683 SHROOM4Q9ULL8 1493 aa31.43■■■□□ 2.62
FADS1-215ENST00000541683 DCAF8L2P0C7V8 631 aa31.36■■■□□ 2.61
FADS1-215ENST00000541683 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
FADS1-215ENST00000541683 ABCC9O60706 1549 aa30.99■■■□□ 2.55
FADS1-215ENST00000541683 NACADO15069 1562 aa30.83■■■□□ 2.53
FADS1-215ENST00000541683 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
FADS1-215ENST00000541683 RB1CC1Q8TDY2 1594 aa30.47■■■□□ 2.47
FADS1-215ENST00000541683 SUPT5HO00267 1087 aaKnown RBP30.43■■■□□ 2.46
FADS1-215ENST00000541683 UNC13AQ9UPW8 1703 aa29.97■■■□□ 2.39
FADS1-215ENST00000541683 RSF1Q96T23 1441 aaPredicted RBP29.85■■■□□ 2.37
FADS1-215ENST00000541683 CECR2Q9BXF3 1484 aa29.71■■■□□ 2.35
FADS1-215ENST00000541683 MROH2BQ7Z745 1585 aa29.6■■■□□ 2.33
FADS1-215ENST00000541683 BICRAQ9NZM4 1560 aa29.58■■■□□ 2.33
FADS1-215ENST00000541683 BAZ1AQ9NRL2 1556 aaPredicted RBP29.53■■■□□ 2.32
FADS1-215ENST00000541683 CHIC1Q5VXU3 224 aa29.41■■■□□ 2.3
FADS1-215ENST00000541683 WIZO95785 1651 aa29.4■■■□□ 2.3
FADS1-215ENST00000541683 SMARCA4P51532 1647 aa29.37■■■□□ 2.29
FADS1-215ENST00000541683 PABPN1Q86U42 306 aaKnown RBP eCLIP29.28■■■□□ 2.28
FADS1-215ENST00000541683 TOP2AP11388 1531 aaKnown RBP29.09■■■□□ 2.25
FADS1-215ENST00000541683 PEG3Q9GZU2 1588 aa29.01■■■□□ 2.24
FADS1-215ENST00000541683 SMARCA2P51531 1590 aa28.84■■■□□ 2.21
FADS1-215ENST00000541683 EIF4G1Q04637 1599 aaKnown RBP28.8■■■□□ 2.2
FADS1-215ENST00000541683 CCDC88BA6NC98 1476 aa28.79■■■□□ 2.2
FADS1-215ENST00000541683 ATAD2BQ9ULI0 1458 aa28.76■■■□□ 2.19
FADS1-215ENST00000541683 BAZ1BQ9UIG0 1483 aaKnown RBP28.6■■■□□ 2.17
FADS1-215ENST00000541683 TRIM41Q8WV44 630 aa28.59■■■□□ 2.17
FADS1-215ENST00000541683 HMGXB3Q12766 1538 aa28.46■■■□□ 2.15
FADS1-215ENST00000541683 NCAPD3P42695 1498 aa28.45■■■□□ 2.14
FADS1-215ENST00000541683 ABCC8Q09428 1581 aa28.31■■■□□ 2.12
FADS1-215ENST00000541683 LOC105371045A0A1W2PR82 267 aa28.27■■■□□ 2.12
FADS1-215ENST00000541683 CC2D2AQ9P2K1 1620 aa28.1■■■□□ 2.09
FADS1-215ENST00000541683 FAM9AQ8IZU1 332 aaPredicted RBP28.06■■■□□ 2.08
FADS1-215ENST00000541683 WRNQ14191 1432 aaPredicted RBP eCLIP28.06■■■□□ 2.082e-8■■□□□ 13.6
FADS1-215ENST00000541683 SYNJ1O43426 1573 aa27.97■■■□□ 2.07
FADS1-215ENST00000541683 CFTRP13569 1480 aa27.92■■■□□ 2.06
FADS1-215ENST00000541683 PRDM2Q13029 1718 aa27.91■■■□□ 2.06
FADS1-215ENST00000541683 EEA1Q15075 1411 aa27.89■■■□□ 2.06
FADS1-215ENST00000541683 SOGA1O94964 1423 aa27.84■■■□□ 2.05
FADS1-215ENST00000541683 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
FADS1-215ENST00000541683 BIVM-ERCC5R4GMW8 1640 aa27.82■■■□□ 2.04
FADS1-215ENST00000541683 RUSC2Q8N2Y8 1516 aa27.73■■■□□ 2.03
FADS1-215ENST00000541683 CADPSQ9ULU8 1353 aa27.72■■■□□ 2.03
FADS1-215ENST00000541683 CSRNP3Q8WYN3 585 aa27.67■■■□□ 2.02
FADS1-215ENST00000541683 CUX1P39880 1505 aa27.65■■■□□ 2.02
FADS1-215ENST00000541683 EHMT2Q96KQ7 1210 aa27.62■■■□□ 2.01
FADS1-215ENST00000541683 KIF21BO75037 1637 aa27.54■■■□□ 2
FADS1-215ENST00000541683 GOLGA3Q08378 1498 aa27.51■■■□□ 2
FADS1-215ENST00000541683 TNIKQ9UKE5 1360 aa27.51■■□□□ 1.99
FADS1-215ENST00000541683 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
FADS1-215ENST00000541683 LAMC3Q9Y6N6 1575 aa27.42■■□□□ 1.98
FADS1-215ENST00000541683 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
FADS1-215ENST00000541683 CEP162Q5TB80 1403 aa27.38■■□□□ 1.97
FADS1-215ENST00000541683 PCGF6Q9BYE7 350 aa27.37■■□□□ 1.97
FADS1-215ENST00000541683 NESP48681 1621 aa27.36■■□□□ 1.97
FADS1-215ENST00000541683 KIF27Q86VH2 1401 aa27.31■■□□□ 1.96
FADS1-215ENST00000541683 UBTFP17480 764 aaKnown RBP27.31■■□□□ 1.96
FADS1-215ENST00000541683 TRIM26Q12899 539 aaPredicted RBP27.31■■□□□ 1.96
FADS1-215ENST00000541683 DNMBPQ6XZF7 1577 aa27.28■■□□□ 1.96
FADS1-215ENST00000541683 ERICH3Q5RHP9 1530 aa27.28■■□□□ 1.96
FADS1-215ENST00000541683 FGD5Q6ZNL6 1462 aa27.27■■□□□ 1.96
FADS1-215ENST00000541683 PRXQ9BXM0 1461 aa27.27■■□□□ 1.96
FADS1-215ENST00000541683 RAPGEF2Q9Y4G8 1499 aa27.27■■□□□ 1.96
FADS1-215ENST00000541683 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
FADS1-215ENST00000541683 TOPBP1Q92547 1522 aa27.19■■□□□ 1.94
FADS1-215ENST00000541683 PDS5BQ9NTI5 1447 aa27.15■■□□□ 1.94
FADS1-215ENST00000541683 CUX2O14529 1486 aa27.15■■□□□ 1.94
FADS1-215ENST00000541683 KIF21AQ7Z4S6 1674 aa27.09■■□□□ 1.93
FADS1-215ENST00000541683 POLA1P09884 1462 aaPredicted RBP27.08■■□□□ 1.93
FADS1-215ENST00000541683 URB2Q14146 1524 aaKnown RBP27.08■■□□□ 1.93
FADS1-215ENST00000541683 CLIP1P30622 1438 aa27.07■■□□□ 1.92
FADS1-215ENST00000541683 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
FADS1-215ENST00000541683 IGF1RP08069 1367 aa27.04■■□□□ 1.92
FADS1-215ENST00000541683 WDR97A6NE52 1622 aa26.99■■□□□ 1.91
FADS1-215ENST00000541683 RAD54L2Q9Y4B4 1467 aa26.98■■□□□ 1.91
FADS1-215ENST00000541683 HRCP23327 699 aa26.96■■□□□ 1.91
FADS1-215ENST00000541683 VPS8Q8N3P4 1428 aa26.91■■□□□ 1.9
FADS1-215ENST00000541683 CARMIL1Q5VZK9 1371 aa26.9■■□□□ 1.9
FADS1-215ENST00000541683 PPARGC1BQ86YN6 1023 aaKnown RBP26.86■■□□□ 1.89
FADS1-215ENST00000541683 CUL7Q14999 1698 aa26.84■■□□□ 1.89
FADS1-215ENST00000541683 ABCA5Q8WWZ7 1642 aa26.83■■□□□ 1.89
FADS1-215ENST00000541683 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
FADS1-215ENST00000541683 ARAP1Q96P48 1450 aa26.79■■□□□ 1.88
FADS1-215ENST00000541683 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
FADS1-215ENST00000541683 ARHGAP35Q9NRY4 1499 aa26.7■■□□□ 1.87
FADS1-215ENST00000541683 RANGAP1P46060 587 aaPredicted RBP26.7■■□□□ 1.87
FADS1-215ENST00000541683 GAPVD1Q14C86 1478 aa26.7■■□□□ 1.86
FADS1-215ENST00000541683 WDR62O43379 1518 aa26.67■■□□□ 1.86
FADS1-215ENST00000541683 TDRD9Q8NDG6 1382 aaKnown RBP26.66■■□□□ 1.86
FADS1-215ENST00000541683 CTTNBP2Q8WZ74 1663 aa26.63■■□□□ 1.85
FADS1-215ENST00000541683 PBRM1Q86U86 1689 aa26.58■■□□□ 1.85
FADS1-215ENST00000541683 APLP2Q06481 763 aa26.58■■□□□ 1.84
FADS1-215ENST00000541683 TTBK1Q5TCY1 1321 aaPredicted RBP26.54■■□□□ 1.84
FADS1-215ENST00000541683 IFT140Q96RY7 1462 aa26.54■■□□□ 1.84
FADS1-215ENST00000541683 THOC2Q8NI27 1593 aaKnown RBP26.52■■□□□ 1.84
FADS1-215ENST00000541683 ERCC6Q03468 1493 aa26.51■■□□□ 1.83
FADS1-215ENST00000541683 EFCAB5A4FU69 1503 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms