RNA–Protein interactions for RNA: ENST00000299853.9

POLR3E-201, Transcript of RNA polymerase III subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR3E, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-201ENST00000299853 NISCHQ9Y2I1 1504 aa25.35■■□□□ 1.65
POLR3E-201ENST00000299853 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
POLR3E-201ENST00000299853 SUPT5HO00267 1087 aaKnown RBP21.66■■□□□ 1.06
POLR3E-201ENST00000299853 DCAF8L2P0C7V8 631 aa21.66■■□□□ 1.06
POLR3E-201ENST00000299853 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.01
POLR3E-201ENST00000299853 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
POLR3E-201ENST00000299853 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
POLR3E-201ENST00000299853 PCGF6Q9BYE7 350 aa20.69■□□□□ 0.9
POLR3E-201ENST00000299853 MYO15BQ96JP2 1530 aa20.69■□□□□ 0.9
POLR3E-201ENST00000299853 PPARGC1BQ86YN6 1023 aaKnown RBP20.62■□□□□ 0.89
POLR3E-201ENST00000299853 DCAF1Q9Y4B6 1507 aa20.57■□□□□ 0.88
POLR3E-201ENST00000299853 EHMT2Q96KQ7 1210 aa20.44■□□□□ 0.86
POLR3E-201ENST00000299853 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
POLR3E-201ENST00000299853 LOC105371045A0A1W2PR82 267 aa20.37■□□□□ 0.85
POLR3E-201ENST00000299853 ABCC9O60706 1549 aa20.3■□□□□ 0.84
POLR3E-201ENST00000299853 HRCP23327 699 aa20.27■□□□□ 0.84
POLR3E-201ENST00000299853 RSF1Q96T23 1441 aaPredicted RBP20.13■□□□□ 0.81
POLR3E-201ENST00000299853 FAM9AQ8IZU1 332 aaPredicted RBP20.1■□□□□ 0.81
POLR3E-201ENST00000299853 TRIM41Q8WV44 630 aa20.04■□□□□ 0.8
POLR3E-201ENST00000299853 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
POLR3E-201ENST00000299853 CECR2Q9BXF3 1484 aa19.94■□□□□ 0.78
POLR3E-201ENST00000299853 NACADO15069 1562 aa19.86■□□□□ 0.77
POLR3E-201ENST00000299853 MROH2BQ7Z745 1585 aa19.81■□□□□ 0.76
POLR3E-201ENST00000299853 TTBK1Q5TCY1 1321 aaPredicted RBP19.78■□□□□ 0.76
POLR3E-201ENST00000299853 TRIM26Q12899 539 aaPredicted RBP19.73■□□□□ 0.75
POLR3E-201ENST00000299853 WIZO95785 1651 aa19.71■□□□□ 0.75
POLR3E-201ENST00000299853 PABPN1Q86U42 306 aaKnown RBP eCLIP19.55■□□□□ 0.72
POLR3E-201ENST00000299853 BAZ1AQ9NRL2 1556 aaPredicted RBP19.46■□□□□ 0.71
POLR3E-201ENST00000299853 ABCC8Q09428 1581 aa19.35■□□□□ 0.69
POLR3E-201ENST00000299853 YTHDC1Q96MU7 727 aaKnown RBP19.32■□□□□ 0.68
POLR3E-201ENST00000299853 SCAF1Q9H7N4 1312 aaKnown RBP19.32■□□□□ 0.68
POLR3E-201ENST00000299853 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
POLR3E-201ENST00000299853 SMARCA4P51532 1647 aa19.31■□□□□ 0.68
POLR3E-201ENST00000299853 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
POLR3E-201ENST00000299853 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.67
POLR3E-201ENST00000299853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
POLR3E-201ENST00000299853 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
POLR3E-201ENST00000299853 CCER1Q8TC90 406 aaPredicted RBP19.2■□□□□ 0.66
POLR3E-201ENST00000299853 EIF4G1Q04637 1599 aaKnown RBP19.2■□□□□ 0.66
POLR3E-201ENST00000299853 ZEB1P37275 1124 aaPredicted RBP19.19■□□□□ 0.66
POLR3E-201ENST00000299853 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
POLR3E-201ENST00000299853 SOGA1O94964 1423 aa19.17■□□□□ 0.66
POLR3E-201ENST00000299853 PELP1Q8IZL8 1130 aaKnown RBP19.13■□□□□ 0.65
POLR3E-201ENST00000299853 RUSC2Q8N2Y8 1516 aa19.09■□□□□ 0.65
POLR3E-201ENST00000299853 BICRAQ9NZM4 1560 aa19.08■□□□□ 0.65
POLR3E-201ENST00000299853 CSRNP3Q8WYN3 585 aa19.06■□□□□ 0.64
POLR3E-201ENST00000299853 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
POLR3E-201ENST00000299853 GTF3C3Q9Y5Q9 886 aa19.05■□□□□ 0.64
POLR3E-201ENST00000299853 CEP162Q5TB80 1403 aa19.02■□□□□ 0.64
POLR3E-201ENST00000299853 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
POLR3E-201ENST00000299853 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
POLR3E-201ENST00000299853 TNIKQ9UKE5 1360 aa18.9■□□□□ 0.62
POLR3E-201ENST00000299853 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
POLR3E-201ENST00000299853 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
POLR3E-201ENST00000299853 CENPBP07199 599 aaPredicted RBP18.87■□□□□ 0.61
POLR3E-201ENST00000299853 DIEXFQ68CQ4 756 aaKnown RBP18.84■□□□□ 0.61
POLR3E-201ENST00000299853 EEA1Q15075 1411 aa18.82■□□□□ 0.6
POLR3E-201ENST00000299853 SYNJ1O43426 1573 aa18.82■□□□□ 0.6
POLR3E-201ENST00000299853 GOLGA3Q08378 1498 aa18.82■□□□□ 0.6
POLR3E-201ENST00000299853 ACIN1Q9UKV3 1341 aaKnown RBP18.81■□□□□ 0.6
POLR3E-201ENST00000299853 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
POLR3E-201ENST00000299853 PEG3Q9GZU2 1588 aa18.77■□□□□ 0.6
POLR3E-201ENST00000299853 APLP2Q06481 763 aa18.7■□□□□ 0.58
POLR3E-201ENST00000299853 CEP164Q9UPV0 1460 aa18.69■□□□□ 0.58
POLR3E-201ENST00000299853 CLIP1P30622 1438 aa18.69■□□□□ 0.58
POLR3E-201ENST00000299853 RAPGEF2Q9Y4G8 1499 aa18.67■□□□□ 0.58
POLR3E-201ENST00000299853 KIF21BO75037 1637 aa18.55■□□□□ 0.56
POLR3E-201ENST00000299853 VPS8Q8N3P4 1428 aa18.52■□□□□ 0.56
POLR3E-201ENST00000299853 TOP2BQ02880 1626 aa18.49■□□□□ 0.55
POLR3E-201ENST00000299853 NCAPD3P42695 1498 aa18.43■□□□□ 0.54
POLR3E-201ENST00000299853 BCANQ96GW7 911 aa18.42■□□□□ 0.54
POLR3E-201ENST00000299853 CUX1P39880 1505 aa18.41■□□□□ 0.54
POLR3E-201ENST00000299853 ZNF316A6NFI3 1004 aaPredicted RBP18.41■□□□□ 0.54
POLR3E-201ENST00000299853 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
POLR3E-201ENST00000299853 ITGAEP38570 1179 aa18.39■□□□□ 0.53
POLR3E-201ENST00000299853 KIF27Q86VH2 1401 aa18.36■□□□□ 0.53
POLR3E-201ENST00000299853 BIVM-ERCC5R4GMW8 1640 aa18.36■□□□□ 0.53
POLR3E-201ENST00000299853 MIER1Q8N108 512 aa18.36■□□□□ 0.53
POLR3E-201ENST00000299853 HMGXB3Q12766 1538 aa18.36■□□□□ 0.53
POLR3E-201ENST00000299853 PRXQ9BXM0 1461 aa18.34■□□□□ 0.53
POLR3E-201ENST00000299853 CFTRP13569 1480 aa18.31■□□□□ 0.52
POLR3E-201ENST00000299853 ARAP1Q96P48 1450 aa18.3■□□□□ 0.52
POLR3E-201ENST00000299853 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
POLR3E-201ENST00000299853 P3H3Q8IVL6 736 aa18.27■□□□□ 0.52
POLR3E-201ENST00000299853 CUX2O14529 1486 aa18.27■□□□□ 0.51
POLR3E-201ENST00000299853 ERICH3Q5RHP9 1530 aa18.25■□□□□ 0.51
POLR3E-201ENST00000299853 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
POLR3E-201ENST00000299853 MYT1Q01538 1121 aa18.18■□□□□ 0.5
POLR3E-201ENST00000299853 ARHGAP35Q9NRY4 1499 aa18.17■□□□□ 0.5
POLR3E-201ENST00000299853 IGF1RP08069 1367 aa18.17■□□□□ 0.5
POLR3E-201ENST00000299853 CARMIL1Q5VZK9 1371 aa18.14■□□□□ 0.49
POLR3E-201ENST00000299853 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.49
POLR3E-201ENST00000299853 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
POLR3E-201ENST00000299853 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
POLR3E-201ENST00000299853 FAM50AQ14320 339 aaKnown RBP18.09■□□□□ 0.49
POLR3E-201ENST00000299853 CCNB3Q8WWL7 1395 aa18.08■□□□□ 0.49
POLR3E-201ENST00000299853 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
POLR3E-201ENST00000299853 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
POLR3E-201ENST00000299853 NESP48681 1621 aa18.04■□□□□ 0.48
POLR3E-201ENST00000299853 RRBP1Q9P2E9 1410 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms