RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.23
CAPRIN1-212ENST00000532820 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
CAPRIN1-212ENST00000532820 SHROOM4Q9ULL8 1493 aa24.55■■□□□ 1.52
CAPRIN1-212ENST00000532820 DCAF8L2P0C7V8 631 aa24.47■■□□□ 1.51
CAPRIN1-212ENST00000532820 ZCCHC6Q5VYS8 1495 aaKnown RBP24.36■■□□□ 1.49
CAPRIN1-212ENST00000532820 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
CAPRIN1-212ENST00000532820 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
CAPRIN1-212ENST00000532820 ABCC9O60706 1549 aa23.61■■□□□ 1.37
CAPRIN1-212ENST00000532820 SCRIBQ14160 1630 aa23.29■■□□□ 1.32
CAPRIN1-212ENST00000532820 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
CAPRIN1-212ENST00000532820 NACADO15069 1562 aa23.06■■□□□ 1.28
CAPRIN1-212ENST00000532820 RB1CC1Q8TDY2 1594 aa22.83■■□□□ 1.24
CAPRIN1-212ENST00000532820 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
CAPRIN1-212ENST00000532820 RSF1Q96T23 1441 aaPredicted RBP22.76■■□□□ 1.23
CAPRIN1-212ENST00000532820 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
CAPRIN1-212ENST00000532820 PABPN1Q86U42 306 aaKnown RBP eCLIP22.56■■□□□ 1.2
CAPRIN1-212ENST00000532820 MROH2BQ7Z745 1585 aa22.53■■□□□ 1.2
CAPRIN1-212ENST00000532820 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.18
CAPRIN1-212ENST00000532820 WIZO95785 1651 aa22.38■■□□□ 1.17
CAPRIN1-212ENST00000532820 BAZ1AQ9NRL2 1556 aaPredicted RBP22.26■■□□□ 1.15
CAPRIN1-212ENST00000532820 BICRAQ9NZM4 1560 aa22.23■■□□□ 1.15
CAPRIN1-212ENST00000532820 LOC105371045A0A1W2PR82 267 aa22.21■■□□□ 1.15
CAPRIN1-212ENST00000532820 TRIM41Q8WV44 630 aa22.18■■□□□ 1.14
CAPRIN1-212ENST00000532820 SMARCA4P51532 1647 aa22.15■■□□□ 1.14
CAPRIN1-212ENST00000532820 FAM9AQ8IZU1 332 aaPredicted RBP22.09■■□□□ 1.13
CAPRIN1-212ENST00000532820 EHMT2Q96KQ7 1210 aa22.01■■□□□ 1.11
CAPRIN1-212ENST00000532820 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
CAPRIN1-212ENST00000532820 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
CAPRIN1-212ENST00000532820 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
CAPRIN1-212ENST00000532820 ATAD2BQ9ULI0 1458 aa21.75■■□□□ 1.07
CAPRIN1-212ENST00000532820 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
CAPRIN1-212ENST00000532820 EIF4G1Q04637 1599 aaKnown RBP21.72■■□□□ 1.07
CAPRIN1-212ENST00000532820 BAZ1BQ9UIG0 1483 aaKnown RBP21.68■■□□□ 1.06
CAPRIN1-212ENST00000532820 PEG3Q9GZU2 1588 aa21.67■■□□□ 1.06
CAPRIN1-212ENST00000532820 PCGF6Q9BYE7 350 aa21.66■■□□□ 1.06
CAPRIN1-212ENST00000532820 SOGA1O94964 1423 aa21.45■■□□□ 1.02
CAPRIN1-212ENST00000532820 WRNQ14191 1432 aaPredicted RBP eCLIP21.41■■□□□ 1.02
CAPRIN1-212ENST00000532820 RUSC2Q8N2Y8 1516 aa21.38■■□□□ 1.01
CAPRIN1-212ENST00000532820 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
CAPRIN1-212ENST00000532820 PPARGC1BQ86YN6 1023 aaKnown RBP21.34■■□□□ 1.01
CAPRIN1-212ENST00000532820 SYNJ1O43426 1573 aa21.3■■□□□ 1
CAPRIN1-212ENST00000532820 HMGXB3Q12766 1538 aa21.28■■□□□ 1
CAPRIN1-212ENST00000532820 CSRNP3Q8WYN3 585 aa21.28■■□□□ 1
CAPRIN1-212ENST00000532820 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
CAPRIN1-212ENST00000532820 UBTFP17480 764 aaKnown RBP21.24■□□□□ 0.99
CAPRIN1-212ENST00000532820 CC2D2AQ9P2K1 1620 aa21.17■□□□□ 0.98
CAPRIN1-212ENST00000532820 HRCP23327 699 aa21.16■□□□□ 0.98
CAPRIN1-212ENST00000532820 TTBK1Q5TCY1 1321 aaPredicted RBP21.13■□□□□ 0.97
CAPRIN1-212ENST00000532820 EEA1Q15075 1411 aa21.1■□□□□ 0.97
CAPRIN1-212ENST00000532820 RANGAP1P46060 587 aaPredicted RBP21.09■□□□□ 0.97
CAPRIN1-212ENST00000532820 CFTRP13569 1480 aa21.07■□□□□ 0.96
CAPRIN1-212ENST00000532820 CEP162Q5TB80 1403 aa21.06■□□□□ 0.96
CAPRIN1-212ENST00000532820 TOP2BQ02880 1626 aa21.03■□□□□ 0.96
CAPRIN1-212ENST00000532820 TNIKQ9UKE5 1360 aa21.02■□□□□ 0.96
CAPRIN1-212ENST00000532820 GOLGA3Q08378 1498 aa21■□□□□ 0.95
CAPRIN1-212ENST00000532820 CUX1P39880 1505 aa21■□□□□ 0.95
CAPRIN1-212ENST00000532820 CADPSQ9ULU8 1353 aa20.99■□□□□ 0.95
CAPRIN1-212ENST00000532820 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
CAPRIN1-212ENST00000532820 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
CAPRIN1-212ENST00000532820 RAPGEF2Q9Y4G8 1499 aa20.93■□□□□ 0.94
CAPRIN1-212ENST00000532820 BIVM-ERCC5R4GMW8 1640 aa20.92■□□□□ 0.94
CAPRIN1-212ENST00000532820 NESP48681 1621 aa20.87■□□□□ 0.93
CAPRIN1-212ENST00000532820 KIF21BO75037 1637 aa20.83■□□□□ 0.93
CAPRIN1-212ENST00000532820 CLIP1P30622 1438 aa20.79■□□□□ 0.92
CAPRIN1-212ENST00000532820 FANCD2Q9BXW9 1451 aa20.79■□□□□ 0.92
CAPRIN1-212ENST00000532820 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
CAPRIN1-212ENST00000532820 PRDM2Q13029 1718 aa20.75■□□□□ 0.91
CAPRIN1-212ENST00000532820 CUX2O14529 1486 aa20.74■□□□□ 0.91
CAPRIN1-212ENST00000532820 FGD5Q6ZNL6 1462 aa20.73■□□□□ 0.91
CAPRIN1-212ENST00000532820 PRXQ9BXM0 1461 aa20.71■□□□□ 0.91
CAPRIN1-212ENST00000532820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
CAPRIN1-212ENST00000532820 RAD54L2Q9Y4B4 1467 aa20.64■□□□□ 0.89
CAPRIN1-212ENST00000532820 IGF1RP08069 1367 aa20.63■□□□□ 0.89
CAPRIN1-212ENST00000532820 APLP2Q06481 763 aa20.61■□□□□ 0.89
CAPRIN1-212ENST00000532820 ERICH3Q5RHP9 1530 aa20.59■□□□□ 0.89
CAPRIN1-212ENST00000532820 VPS8Q8N3P4 1428 aa20.59■□□□□ 0.89
CAPRIN1-212ENST00000532820 TOPBP1Q92547 1522 aa20.57■□□□□ 0.88
CAPRIN1-212ENST00000532820 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
CAPRIN1-212ENST00000532820 POLA1P09884 1462 aaPredicted RBP20.54■□□□□ 0.88
CAPRIN1-212ENST00000532820 DNMBPQ6XZF7 1577 aa20.53■□□□□ 0.88
CAPRIN1-212ENST00000532820 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
CAPRIN1-212ENST00000532820 CCER1Q8TC90 406 aaPredicted RBP20.52■□□□□ 0.87
CAPRIN1-212ENST00000532820 URB2Q14146 1524 aaKnown RBP20.5■□□□□ 0.87
CAPRIN1-212ENST00000532820 PDS5BQ9NTI5 1447 aa20.48■□□□□ 0.87
CAPRIN1-212ENST00000532820 HNRNPUL2Q1KMD3 747 aaKnown RBP20.48■□□□□ 0.87
CAPRIN1-212ENST00000532820 ARAP1Q96P48 1450 aa20.48■□□□□ 0.87
CAPRIN1-212ENST00000532820 ZEB1P37275 1124 aaPredicted RBP20.47■□□□□ 0.87
CAPRIN1-212ENST00000532820 P3H3Q8IVL6 736 aa20.46■□□□□ 0.87
CAPRIN1-212ENST00000532820 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
CAPRIN1-212ENST00000532820 KANK4Q5T7N3 995 aaPredicted RBP20.42■□□□□ 0.86
CAPRIN1-212ENST00000532820 ABCA10Q8WWZ4 1543 aa20.41■□□□□ 0.86
CAPRIN1-212ENST00000532820 ARHGAP35Q9NRY4 1499 aa20.41■□□□□ 0.86
CAPRIN1-212ENST00000532820 KIF21AQ7Z4S6 1674 aa20.41■□□□□ 0.86
CAPRIN1-212ENST00000532820 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
CAPRIN1-212ENST00000532820 GAPVD1Q14C86 1478 aa20.27■□□□□ 0.83
CAPRIN1-212ENST00000532820 FHOD3Q2V2M9 1422 aa20.22■□□□□ 0.83
CAPRIN1-212ENST00000532820 AQRO60306 1485 aaKnown RBP eCLIP20.21■□□□□ 0.834e-7■■■■■ 29.8
CAPRIN1-212ENST00000532820 ITGAEP38570 1179 aa20.2■□□□□ 0.82
CAPRIN1-212ENST00000532820 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
CAPRIN1-212ENST00000532820 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms