RNA–Protein interactions for RNA: ENST00000615879.4

POLR3E-219, Transcript of RNA polymerase III subunit E, humanhuman

TSL 2 BASIC

Gene POLR3E, Length 3,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-219ENST00000615879 NISCHQ9Y2I1 1504 aa24.46■■□□□ 1.51
POLR3E-219ENST00000615879 DCAF8L2P0C7V8 631 aa21.84■■□□□ 1.09
POLR3E-219ENST00000615879 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
POLR3E-219ENST00000615879 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.96
POLR3E-219ENST00000615879 CCDC180Q9P1Z9 1646 aa20.89■□□□□ 0.93
POLR3E-219ENST00000615879 PCGF6Q9BYE7 350 aa20.64■□□□□ 0.9
POLR3E-219ENST00000615879 ZCCHC6Q5VYS8 1495 aaKnown RBP20.64■□□□□ 0.89
POLR3E-219ENST00000615879 PPARGC1BQ86YN6 1023 aaKnown RBP20.62■□□□□ 0.89
POLR3E-219ENST00000615879 HRCP23327 699 aa20.36■□□□□ 0.85
POLR3E-219ENST00000615879 DCAF1Q9Y4B6 1507 aa20.08■□□□□ 0.81
POLR3E-219ENST00000615879 EHMT2Q96KQ7 1210 aa20.04■□□□□ 0.8
POLR3E-219ENST00000615879 PELP1Q8IZL8 1130 aaKnown RBP19.87■□□□□ 0.77
POLR3E-219ENST00000615879 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
POLR3E-219ENST00000615879 FAM9AQ8IZU1 332 aaPredicted RBP19.7■□□□□ 0.74
POLR3E-219ENST00000615879 ABCC9O60706 1549 aa19.68■□□□□ 0.74
POLR3E-219ENST00000615879 LOC105371045A0A1W2PR82 267 aa19.67■□□□□ 0.74
POLR3E-219ENST00000615879 CHIC1Q5VXU3 224 aa19.56■□□□□ 0.72
POLR3E-219ENST00000615879 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
POLR3E-219ENST00000615879 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
POLR3E-219ENST00000615879 TTBK1Q5TCY1 1321 aaPredicted RBP19.46■□□□□ 0.71
POLR3E-219ENST00000615879 YTHDC1Q96MU7 727 aaKnown RBP19.4■□□□□ 0.7
POLR3E-219ENST00000615879 NACADO15069 1562 aa19.4■□□□□ 0.7
POLR3E-219ENST00000615879 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
POLR3E-219ENST00000615879 PABPN1Q86U42 306 aaKnown RBP eCLIP19.28■□□□□ 0.68
POLR3E-219ENST00000615879 RSF1Q96T23 1441 aaPredicted RBP19.27■□□□□ 0.68
POLR3E-219ENST00000615879 TRIM26Q12899 539 aaPredicted RBP19.27■□□□□ 0.68
POLR3E-219ENST00000615879 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
POLR3E-219ENST00000615879 CENPBP07199 599 aaPredicted RBP19.13■□□□□ 0.65
POLR3E-219ENST00000615879 RB1CC1Q8TDY2 1594 aa19.12■□□□□ 0.65
POLR3E-219ENST00000615879 CCER1Q8TC90 406 aaPredicted RBP19.12■□□□□ 0.65
POLR3E-219ENST00000615879 NEUROD1Q13562 356 aa19.1■□□□□ 0.65
POLR3E-219ENST00000615879 CECR2Q9BXF3 1484 aa19.1■□□□□ 0.65
POLR3E-219ENST00000615879 ZEB1P37275 1124 aaPredicted RBP19.09■□□□□ 0.65
POLR3E-219ENST00000615879 MYT1Q01538 1121 aa19.06■□□□□ 0.64
POLR3E-219ENST00000615879 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
POLR3E-219ENST00000615879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
POLR3E-219ENST00000615879 MROH2BQ7Z745 1585 aa19■□□□□ 0.63
POLR3E-219ENST00000615879 ACIN1Q9UKV3 1341 aaKnown RBP19■□□□□ 0.63
POLR3E-219ENST00000615879 EIF4G1Q04637 1599 aaKnown RBP18.87■□□□□ 0.61
POLR3E-219ENST00000615879 WIZO95785 1651 aa18.87■□□□□ 0.61
POLR3E-219ENST00000615879 DIEXFQ68CQ4 756 aaKnown RBP18.86■□□□□ 0.61
POLR3E-219ENST00000615879 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
POLR3E-219ENST00000615879 UNC13AQ9UPW8 1703 aa18.78■□□□□ 0.6
POLR3E-219ENST00000615879 UBTFP17480 764 aaKnown RBP18.76■□□□□ 0.59
POLR3E-219ENST00000615879 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
POLR3E-219ENST00000615879 BICRAQ9NZM4 1560 aa18.61■□□□□ 0.57
POLR3E-219ENST00000615879 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
POLR3E-219ENST00000615879 CCDC88BA6NC98 1476 aa18.51■□□□□ 0.55
POLR3E-219ENST00000615879 BCANQ96GW7 911 aa18.5■□□□□ 0.55
POLR3E-219ENST00000615879 APLP2Q06481 763 aa18.48■□□□□ 0.55
POLR3E-219ENST00000615879 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
POLR3E-219ENST00000615879 ATP1B4Q9UN42 357 aaPredicted RBP18.41■□□□□ 0.54
POLR3E-219ENST00000615879 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
POLR3E-219ENST00000615879 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
POLR3E-219ENST00000615879 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.52
POLR3E-219ENST00000615879 MIER1Q8N108 512 aa18.3■□□□□ 0.52
POLR3E-219ENST00000615879 BCL11AQ9H165 835 aa18.28■□□□□ 0.52
POLR3E-219ENST00000615879 ATAD2BQ9ULI0 1458 aa18.27■□□□□ 0.51
POLR3E-219ENST00000615879 ZNF316A6NFI3 1004 aaPredicted RBP18.22■□□□□ 0.51
POLR3E-219ENST00000615879 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
POLR3E-219ENST00000615879 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
POLR3E-219ENST00000615879 SOGA1O94964 1423 aa18.17■□□□□ 0.5
POLR3E-219ENST00000615879 WRNQ14191 1432 aaPredicted RBP eCLIP18.16■□□□□ 0.5
POLR3E-219ENST00000615879 ITGAEP38570 1179 aa18.15■□□□□ 0.5
POLR3E-219ENST00000615879 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.5
POLR3E-219ENST00000615879 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.49
POLR3E-219ENST00000615879 EEA1Q15075 1411 aa18.04■□□□□ 0.48
POLR3E-219ENST00000615879 ANP32EQ9BTT0 268 aa18.02■□□□□ 0.48
POLR3E-219ENST00000615879 SYNJ1O43426 1573 aa18.01■□□□□ 0.47
POLR3E-219ENST00000615879 P3H3Q8IVL6 736 aa17.96■□□□□ 0.47
POLR3E-219ENST00000615879 TNIKQ9UKE5 1360 aa17.96■□□□□ 0.47
POLR3E-219ENST00000615879 NCAPD3P42695 1498 aa17.96■□□□□ 0.47
POLR3E-219ENST00000615879 CEP162Q5TB80 1403 aa17.96■□□□□ 0.47
POLR3E-219ENST00000615879 NEFLP07196 543 aa17.95■□□□□ 0.46
POLR3E-219ENST00000615879 KIF21BO75037 1637 aa17.92■□□□□ 0.46
POLR3E-219ENST00000615879 HMGXB3Q12766 1538 aa17.92■□□□□ 0.46
POLR3E-219ENST00000615879 SUPT16HQ9Y5B9 1047 aaKnown RBP17.91■□□□□ 0.46
POLR3E-219ENST00000615879 FKBP8Q14318 412 aa17.9■□□□□ 0.46
POLR3E-219ENST00000615879 GOLGA3Q08378 1498 aa17.89■□□□□ 0.45
POLR3E-219ENST00000615879 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
POLR3E-219ENST00000615879 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
POLR3E-219ENST00000615879 TOP2BQ02880 1626 aa17.81■□□□□ 0.44
POLR3E-219ENST00000615879 ARID3CA6NKF2 412 aa17.79■□□□□ 0.44
POLR3E-219ENST00000615879 BIVM-ERCC5R4GMW8 1640 aa17.79■□□□□ 0.44
POLR3E-219ENST00000615879 CNGB1Q14028 1251 aaPredicted RBP17.75■□□□□ 0.43
POLR3E-219ENST00000615879 CFTRP13569 1480 aa17.75■□□□□ 0.43
POLR3E-219ENST00000615879 IRX6P78412 446 aaPredicted RBP17.73■□□□□ 0.43
POLR3E-219ENST00000615879 RAPGEF2Q9Y4G8 1499 aa17.73■□□□□ 0.43
POLR3E-219ENST00000615879 TRIM52Q96A61 297 aa17.71■□□□□ 0.43
POLR3E-219ENST00000615879 CUX1P39880 1505 aa17.7■□□□□ 0.42
POLR3E-219ENST00000615879 CLIP1P30622 1438 aa17.68■□□□□ 0.42
POLR3E-219ENST00000615879 FAM50AQ14320 339 aaKnown RBP17.68■□□□□ 0.42
POLR3E-219ENST00000615879 FBLN2P98095 1184 aa17.68■□□□□ 0.42
POLR3E-219ENST00000615879 NBR1Q14596 966 aa17.66■□□□□ 0.42
POLR3E-219ENST00000615879 KCNH8Q96L42 1107 aa17.65■□□□□ 0.42
POLR3E-219ENST00000615879 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
POLR3E-219ENST00000615879 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
POLR3E-219ENST00000615879 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
POLR3E-219ENST00000615879 PRXQ9BXM0 1461 aa17.59■□□□□ 0.41
POLR3E-219ENST00000615879 KIF27Q86VH2 1401 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms