RNA–Protein interactions for RNA: ENST00000544309.5

FADS1-217, Transcript of fatty acid desaturase 1, humanhuman

TSL 3

Gene FADS1, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FADS1-217ENST00000544309 NISCHQ9Y2I1 1504 aa45.16■■■■■ 4.82
FADS1-217ENST00000544309 CCDC180Q9P1Z9 1646 aa40.49■■■■■ 4.07
FADS1-217ENST00000544309 ABCC9O60706 1549 aa40.3■■■■■ 4.04
FADS1-217ENST00000544309 RB1CC1Q8TDY2 1594 aa38.5■■■■□ 3.75
FADS1-217ENST00000544309 NACADO15069 1562 aa38.25■■■■□ 3.71
FADS1-217ENST00000544309 DCAF8L2P0C7V8 631 aa38.18■■■■□ 3.7
FADS1-217ENST00000544309 MYO15BQ96JP2 1530 aa37.75■■■■□ 3.63
FADS1-217ENST00000544309 PABPN1Q86U42 306 aaKnown RBP eCLIP37.53■■■■□ 3.6
FADS1-217ENST00000544309 DNAJC5BQ9UF47 199 aa37.49■■■■□ 3.59
FADS1-217ENST00000544309 UNC13AQ9UPW8 1703 aa37.49■■■■□ 3.59
FADS1-217ENST00000544309 ZCCHC6Q5VYS8 1495 aaKnown RBP37.45■■■■□ 3.59
FADS1-217ENST00000544309 DCAF1Q9Y4B6 1507 aa37.33■■■■□ 3.57
FADS1-217ENST00000544309 BICRAQ9NZM4 1560 aa37.21■■■■□ 3.55
FADS1-217ENST00000544309 SCRIBQ14160 1630 aa36.91■■■■□ 3.5
FADS1-217ENST00000544309 SHROOM4Q9ULL8 1493 aa36.9■■■■□ 3.5
FADS1-217ENST00000544309 CC2D2AQ9P2K1 1620 aa36.4■■■■□ 3.42
FADS1-217ENST00000544309 EIF4G1Q04637 1599 aaKnown RBP36.36■■■■□ 3.41
FADS1-217ENST00000544309 CECR2Q9BXF3 1484 aa36.31■■■■□ 3.4
FADS1-217ENST00000544309 NCAPD3P42695 1498 aa35.26■■■■□ 3.23
FADS1-217ENST00000544309 SMARCA4P51532 1647 aa35.21■■■■□ 3.23
FADS1-217ENST00000544309 SMARCA2P51531 1590 aa35.17■■■■□ 3.22
FADS1-217ENST00000544309 ATAD2BQ9ULI0 1458 aa35.17■■■■□ 3.22
FADS1-217ENST00000544309 BAZ1AQ9NRL2 1556 aaPredicted RBP35.11■■■■□ 3.21
FADS1-217ENST00000544309 HMGXB3Q12766 1538 aa35.06■■■■□ 3.2
FADS1-217ENST00000544309 BAZ1BQ9UIG0 1483 aaKnown RBP34.93■■■■□ 3.18
FADS1-217ENST00000544309 ERCC6Q03468 1493 aa34.9■■■■□ 3.18
FADS1-217ENST00000544309 PEG3Q9GZU2 1588 aa34.83■■■■□ 3.17
FADS1-217ENST00000544309 MROH2BQ7Z745 1585 aa34.76■■■■□ 3.16
FADS1-217ENST00000544309 CUX2O14529 1486 aa34.71■■■■□ 3.15
FADS1-217ENST00000544309 NESP48681 1621 aa34.61■■■■□ 3.13
FADS1-217ENST00000544309 LAMC3Q9Y6N6 1575 aa34.5■■■■□ 3.11
FADS1-217ENST00000544309 DNAJC5Q9H3Z4 198 aa34.42■■■■□ 3.1
FADS1-217ENST00000544309 WIZO95785 1651 aa34.37■■■■□ 3.09
FADS1-217ENST00000544309 PDS5BQ9NTI5 1447 aa34.34■■■■□ 3.09
FADS1-217ENST00000544309 THOC2Q8NI27 1593 aaKnown RBP34.24■■■■□ 3.07
FADS1-217ENST00000544309 CADPSQ9ULU8 1353 aa34.23■■■■□ 3.07
FADS1-217ENST00000544309 KIF21AQ7Z4S6 1674 aa34.2■■■■□ 3.07
FADS1-217ENST00000544309 RSF1Q96T23 1441 aaPredicted RBP34.12■■■■□ 3.05
FADS1-217ENST00000544309 TOP2AP11388 1531 aaKnown RBP34■■■■□ 3.03
FADS1-217ENST00000544309 MRC2Q9UBG0 1479 aa33.99■■■■□ 3.03
FADS1-217ENST00000544309 CEP164Q9UPV0 1460 aa33.92■■■■□ 3.02
FADS1-217ENST00000544309 FANCD2Q9BXW9 1451 aa33.86■■■■□ 3.01
FADS1-217ENST00000544309 WDR62O43379 1518 aa33.85■■■■□ 3.01
FADS1-217ENST00000544309 CFTRP13569 1480 aa33.84■■■■□ 3.01
FADS1-217ENST00000544309 CCDC88BA6NC98 1476 aa33.57■■■□□ 2.97
FADS1-217ENST00000544309 PRDM2Q13029 1718 aa33.57■■■□□ 2.96
FADS1-217ENST00000544309 URB2Q14146 1524 aaKnown RBP33.5■■■□□ 2.95
FADS1-217ENST00000544309 ABCC8Q09428 1581 aa33.25■■■□□ 2.91
FADS1-217ENST00000544309 IFT140Q96RY7 1462 aa33.23■■■□□ 2.91
FADS1-217ENST00000544309 TOPBP1Q92547 1522 aa33.21■■■□□ 2.91
FADS1-217ENST00000544309 OSCARQ8IYS5 282 aa33.18■■■□□ 2.9
FADS1-217ENST00000544309 DNMBPQ6XZF7 1577 aa33.13■■■□□ 2.89
FADS1-217ENST00000544309 TRIM41Q8WV44 630 aa33.09■■■□□ 2.89
FADS1-217ENST00000544309 ZNF608Q9ULD9 1512 aaPredicted RBP33.05■■■□□ 2.88
FADS1-217ENST00000544309 EIF4G3O43432 1585 aaKnown RBP32.93■■■□□ 2.86
FADS1-217ENST00000544309 POLA1P09884 1462 aaPredicted RBP32.87■■■□□ 2.85
FADS1-217ENST00000544309 SUPT5HO00267 1087 aaKnown RBP32.86■■■□□ 2.85
FADS1-217ENST00000544309 TARBP1Q13395 1621 aaKnown RBP32.85■■■□□ 2.85
FADS1-217ENST00000544309 AQRO60306 1485 aaKnown RBP eCLIP32.8■■■□□ 2.846e-9■■■■■ 26.8
FADS1-217ENST00000544309 SOGA1O94964 1423 aa32.77■■■□□ 2.84
FADS1-217ENST00000544309 RAD54L2Q9Y4B4 1467 aa32.73■■■□□ 2.83
FADS1-217ENST00000544309 FGD5Q6ZNL6 1462 aa32.71■■■□□ 2.83
FADS1-217ENST00000544309 FBLN2P98095 1184 aa32.69■■■□□ 2.82
FADS1-217ENST00000544309 CUX1P39880 1505 aa32.66■■■□□ 2.82
FADS1-217ENST00000544309 RIMBP3CA6NJZ7 1639 aa32.66■■■□□ 2.82
FADS1-217ENST00000544309 RIMBP3BA6NNM3 1639 aa32.66■■■□□ 2.82
FADS1-217ENST00000544309 RIMBP3Q9UFD9 1639 aa32.66■■■□□ 2.82
FADS1-217ENST00000544309 TDRD9Q8NDG6 1382 aaKnown RBP32.65■■■□□ 2.82
FADS1-217ENST00000544309 WDR97A6NE52 1622 aa32.65■■■□□ 2.82
FADS1-217ENST00000544309 CHD1O14646 1710 aa32.65■■■□□ 2.82
FADS1-217ENST00000544309 ARHGEF11O15085 1522 aa32.58■■■□□ 2.81
FADS1-217ENST00000544309 SNAPC4Q5SXM2 1469 aa32.52■■■□□ 2.8
FADS1-217ENST00000544309 GRIN2BQ13224 1484 aa32.49■■■□□ 2.79
FADS1-217ENST00000544309 MAGI1Q96QZ7 1491 aaPredicted RBP32.48■■■□□ 2.79
FADS1-217ENST00000544309 CHMP7Q8WUX9 453 aaPredicted RBP32.47■■■□□ 2.79
FADS1-217ENST00000544309 GAPVD1Q14C86 1478 aa32.38■■■□□ 2.77
FADS1-217ENST00000544309 CYB5RLQ6IPT4 315 aa32.37■■■□□ 2.77
FADS1-217ENST00000544309 SYNJ1O43426 1573 aa32.36■■■□□ 2.77
FADS1-217ENST00000544309 ABCA10Q8WWZ4 1543 aa32.35■■■□□ 2.77
FADS1-217ENST00000544309 SYNJ2O15056 1496 aa32.35■■■□□ 2.77
FADS1-217ENST00000544309 PBRM1Q86U86 1689 aa32.34■■■□□ 2.77
FADS1-217ENST00000544309 WRNQ14191 1432 aaPredicted RBP eCLIP32.32■■■□□ 2.762e-8■■□□□ 13.6
FADS1-217ENST00000544309 ABCA5Q8WWZ7 1642 aa32.26■■■□□ 2.76
FADS1-217ENST00000544309 CLASP1Q7Z460 1538 aa32.25■■■□□ 2.75
FADS1-217ENST00000544309 ARAP1Q96P48 1450 aa32.24■■■□□ 2.75
FADS1-217ENST00000544309 TOP2BQ02880 1626 aa32.23■■■□□ 2.75
FADS1-217ENST00000544309 BIVM-ERCC5R4GMW8 1640 aa32.22■■■□□ 2.75
FADS1-217ENST00000544309 TRHP20396 242 aaPredicted RBP32.05■■■□□ 2.72
FADS1-217ENST00000544309 GRIN2AQ12879 1464 aa32.03■■■□□ 2.72
FADS1-217ENST00000544309 ADAMTS12P58397 1594 aa32.03■■■□□ 2.72
FADS1-217ENST00000544309 FHAD1B1AJZ9 1412 aa32■■■□□ 2.71
FADS1-217ENST00000544309 ERICH3Q5RHP9 1530 aa31.98■■■□□ 2.71
FADS1-217ENST00000544309 NUP160Q12769 1436 aa31.89■■■□□ 2.7
FADS1-217ENST00000544309 CEP170Q5SW79 1584 aa31.86■■■□□ 2.69
FADS1-217ENST00000544309 SHROOM2Q13796 1616 aa31.71■■■□□ 2.67
FADS1-217ENST00000544309 ERCC6L2Q5T890 1561 aa31.7■■■□□ 2.67
FADS1-217ENST00000544309 KIF27Q86VH2 1401 aa31.69■■■□□ 2.66
FADS1-217ENST00000544309 PRG4Q92954 1404 aaPredicted RBP31.62■■■□□ 2.65
FADS1-217ENST00000544309 JPH4Q96JJ6 628 aa31.61■■■□□ 2.65
FADS1-217ENST00000544309 CUL7Q14999 1698 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms