RNA–Protein interactions for RNA: ENST00000564209.5

POLR3E-209, Transcript of RNA polymerase III subunit E, humanhuman

TSL 2 BASIC

Gene POLR3E, Length 2,464 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-209ENST00000564209 NISCHQ9Y2I1 1504 aa39.38■■■■□ 3.89
POLR3E-209ENST00000564209 CCDC180Q9P1Z9 1646 aa33.69■■■□□ 2.98
POLR3E-209ENST00000564209 SHROOM4Q9ULL8 1493 aa33.28■■■□□ 2.92
POLR3E-209ENST00000564209 ZCCHC6Q5VYS8 1495 aaKnown RBP33.22■■■□□ 2.91
POLR3E-209ENST00000564209 DCAF8L2P0C7V8 631 aa32.83■■■□□ 2.85
POLR3E-209ENST00000564209 SUPT5HO00267 1087 aaKnown RBP32.38■■■□□ 2.77
POLR3E-209ENST00000564209 DCAF1Q9Y4B6 1507 aa32.27■■■□□ 2.76
POLR3E-209ENST00000564209 ABCC9O60706 1549 aa31.67■■■□□ 2.66
POLR3E-209ENST00000564209 SCRIBQ14160 1630 aa31.55■■■□□ 2.64
POLR3E-209ENST00000564209 MYO15BQ96JP2 1530 aa31.51■■■□□ 2.63
POLR3E-209ENST00000564209 CHIC1Q5VXU3 224 aa31.43■■■□□ 2.62
POLR3E-209ENST00000564209 NACADO15069 1562 aa31.25■■■□□ 2.59
POLR3E-209ENST00000564209 RSF1Q96T23 1441 aaPredicted RBP30.99■■■□□ 2.55
POLR3E-209ENST00000564209 RB1CC1Q8TDY2 1594 aa30.86■■■□□ 2.53
POLR3E-209ENST00000564209 CECR2Q9BXF3 1484 aa30.79■■■□□ 2.52
POLR3E-209ENST00000564209 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
POLR3E-209ENST00000564209 HRCP23327 699 aa30.62■■■□□ 2.49
POLR3E-209ENST00000564209 PCGF6Q9BYE7 350 aa30.61■■■□□ 2.49
POLR3E-209ENST00000564209 LOC105371045A0A1W2PR82 267 aa30.59■■■□□ 2.49
POLR3E-209ENST00000564209 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
POLR3E-209ENST00000564209 WIZO95785 1651 aa30.44■■■□□ 2.46
POLR3E-209ENST00000564209 BAZ1AQ9NRL2 1556 aaPredicted RBP30.27■■■□□ 2.44
POLR3E-209ENST00000564209 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
POLR3E-209ENST00000564209 TRIM41Q8WV44 630 aa30.17■■■□□ 2.42
POLR3E-209ENST00000564209 PPARGC1BQ86YN6 1023 aaKnown RBP30.11■■■□□ 2.41
POLR3E-209ENST00000564209 SMARCA4P51532 1647 aa30.1■■■□□ 2.41
POLR3E-209ENST00000564209 BICRAQ9NZM4 1560 aa30.08■■■□□ 2.41
POLR3E-209ENST00000564209 FAM9AQ8IZU1 332 aaPredicted RBP29.96■■■□□ 2.39
POLR3E-209ENST00000564209 TOP2AP11388 1531 aaKnown RBP29.92■■■□□ 2.38
POLR3E-209ENST00000564209 TRIM26Q12899 539 aaPredicted RBP29.9■■■□□ 2.38
POLR3E-209ENST00000564209 CCDC88BA6NC98 1476 aa29.8■■■□□ 2.36
POLR3E-209ENST00000564209 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
POLR3E-209ENST00000564209 SMARCA2P51531 1590 aa29.76■■■□□ 2.35
POLR3E-209ENST00000564209 EHMT2Q96KQ7 1210 aa29.75■■■□□ 2.35
POLR3E-209ENST00000564209 ABCC8Q09428 1581 aa29.59■■■□□ 2.33
POLR3E-209ENST00000564209 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
POLR3E-209ENST00000564209 ATAD2BQ9ULI0 1458 aa29.44■■■□□ 2.3
POLR3E-209ENST00000564209 BAZ1BQ9UIG0 1483 aaKnown RBP29.34■■■□□ 2.29
POLR3E-209ENST00000564209 SOGA1O94964 1423 aa29.21■■■□□ 2.27
POLR3E-209ENST00000564209 ZEB1P37275 1124 aaPredicted RBP29.18■■■□□ 2.26
POLR3E-209ENST00000564209 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
POLR3E-209ENST00000564209 RUSC2Q8N2Y8 1516 aa29.11■■■□□ 2.25
POLR3E-209ENST00000564209 SYNJ1O43426 1573 aa29.02■■■□□ 2.24
POLR3E-209ENST00000564209 CSRNP3Q8WYN3 585 aa28.96■■■□□ 2.23
POLR3E-209ENST00000564209 NCAPD3P42695 1498 aa28.93■■■□□ 2.22
POLR3E-209ENST00000564209 EEA1Q15075 1411 aa28.89■■■□□ 2.21
POLR3E-209ENST00000564209 HMGXB3Q12766 1538 aa28.88■■■□□ 2.21
POLR3E-209ENST00000564209 UBTFP17480 764 aaKnown RBP28.82■■■□□ 2.2
POLR3E-209ENST00000564209 CEP162Q5TB80 1403 aa28.82■■■□□ 2.2
POLR3E-209ENST00000564209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.8■■■□□ 2.2
POLR3E-209ENST00000564209 TNIKQ9UKE5 1360 aa28.78■■■□□ 2.2
POLR3E-209ENST00000564209 TTBK1Q5TCY1 1321 aaPredicted RBP28.75■■■□□ 2.19
POLR3E-209ENST00000564209 GOLGA3Q08378 1498 aa28.71■■■□□ 2.19
POLR3E-209ENST00000564209 TOP2BQ02880 1626 aa28.67■■■□□ 2.18
POLR3E-209ENST00000564209 CCER1Q8TC90 406 aaPredicted RBP28.64■■■□□ 2.18
POLR3E-209ENST00000564209 CEP164Q9UPV0 1460 aa28.6■■■□□ 2.17
POLR3E-209ENST00000564209 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
POLR3E-209ENST00000564209 CFTRP13569 1480 aa28.57■■■□□ 2.16
POLR3E-209ENST00000564209 KIF21BO75037 1637 aa28.56■■■□□ 2.16
POLR3E-209ENST00000564209 CUX1P39880 1505 aa28.53■■■□□ 2.16
POLR3E-209ENST00000564209 RAPGEF2Q9Y4G8 1499 aa28.51■■■□□ 2.15
POLR3E-209ENST00000564209 CC2D2AQ9P2K1 1620 aa28.51■■■□□ 2.15
POLR3E-209ENST00000564209 RANGAP1P46060 587 aaPredicted RBP28.44■■■□□ 2.14
POLR3E-209ENST00000564209 CLIP1P30622 1438 aa28.38■■■□□ 2.13
POLR3E-209ENST00000564209 CADPSQ9ULU8 1353 aa28.36■■■□□ 2.13
POLR3E-209ENST00000564209 SCAF1Q9H7N4 1312 aaKnown RBP28.33■■■□□ 2.13
POLR3E-209ENST00000564209 PRDM2Q13029 1718 aa28.31■■■□□ 2.12
POLR3E-209ENST00000564209 PRXQ9BXM0 1461 aa28.26■■■□□ 2.11
POLR3E-209ENST00000564209 KIF27Q86VH2 1401 aa28.25■■■□□ 2.11
POLR3E-209ENST00000564209 VPS8Q8N3P4 1428 aa28.18■■■□□ 2.1
POLR3E-209ENST00000564209 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
POLR3E-209ENST00000564209 DIEXFQ68CQ4 756 aaKnown RBP28.14■■■□□ 2.1
POLR3E-209ENST00000564209 CUX2O14529 1486 aa28.11■■■□□ 2.09
POLR3E-209ENST00000564209 FGD5Q6ZNL6 1462 aa28.1■■■□□ 2.09
POLR3E-209ENST00000564209 NESP48681 1621 aa28.1■■■□□ 2.09
POLR3E-209ENST00000564209 FANCD2Q9BXW9 1451 aa28.09■■■□□ 2.09
POLR3E-209ENST00000564209 HNRNPUL2Q1KMD3 747 aaKnown RBP28.07■■■□□ 2.08
POLR3E-209ENST00000564209 APLP2Q06481 763 aa28.02■■■□□ 2.08
POLR3E-209ENST00000564209 DNAJC5BQ9UF47 199 aa28.01■■■□□ 2.07
POLR3E-209ENST00000564209 IGF1RP08069 1367 aa28.01■■■□□ 2.07
POLR3E-209ENST00000564209 ARAP1Q96P48 1450 aa28■■■□□ 2.07
POLR3E-209ENST00000564209 NEUROD1Q13562 356 aa28■■■□□ 2.07
POLR3E-209ENST00000564209 ACIN1Q9UKV3 1341 aaKnown RBP27.97■■■□□ 2.07
POLR3E-209ENST00000564209 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
POLR3E-209ENST00000564209 ZNF316A6NFI3 1004 aaPredicted RBP27.89■■■□□ 2.05
POLR3E-209ENST00000564209 CARMIL1Q5VZK9 1371 aa27.87■■■□□ 2.05
POLR3E-209ENST00000564209 DNMBPQ6XZF7 1577 aa27.87■■■□□ 2.05
POLR3E-209ENST00000564209 TOPBP1Q92547 1522 aa27.86■■■□□ 2.05
POLR3E-209ENST00000564209 ARHGAP35Q9NRY4 1499 aa27.84■■■□□ 2.05
POLR3E-209ENST00000564209 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.05
POLR3E-209ENST00000564209 KANK4Q5T7N3 995 aaPredicted RBP27.81■■■□□ 2.04
POLR3E-209ENST00000564209 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
POLR3E-209ENST00000564209 URB2Q14146 1524 aaKnown RBP27.74■■■□□ 2.03
POLR3E-209ENST00000564209 ABCA10Q8WWZ4 1543 aa27.73■■■□□ 2.03
POLR3E-209ENST00000564209 CENPBP07199 599 aaPredicted RBP27.7■■■□□ 2.02
POLR3E-209ENST00000564209 GTF3C3Q9Y5Q9 886 aa27.69■■■□□ 2.02
POLR3E-209ENST00000564209 P3H3Q8IVL6 736 aa27.62■■■□□ 2.01
POLR3E-209ENST00000564209 PDS5BQ9NTI5 1447 aa27.61■■■□□ 2.01
POLR3E-209ENST00000564209 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
POLR3E-209ENST00000564209 TDRD9Q8NDG6 1382 aaKnown RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms