RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 NISCHQ9Y2I1 1504 aa25.86■■□□□ 1.73
CAPRIN1-202ENST00000389645 CCDC180Q9P1Z9 1646 aa22.21■■□□□ 1.15
CAPRIN1-202ENST00000389645 DCAF8L2P0C7V8 631 aa21.84■■□□□ 1.09
CAPRIN1-202ENST00000389645 ZCCHC6Q5VYS8 1495 aaKnown RBP21.71■■□□□ 1.07
CAPRIN1-202ENST00000389645 SHROOM4Q9ULL8 1493 aa21.71■■□□□ 1.07
CAPRIN1-202ENST00000389645 ABCC9O60706 1549 aa21.3■■□□□ 1
CAPRIN1-202ENST00000389645 DCAF1Q9Y4B6 1507 aa21.15■□□□□ 0.98
CAPRIN1-202ENST00000389645 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
CAPRIN1-202ENST00000389645 SCRIBQ14160 1630 aa20.81■□□□□ 0.92
CAPRIN1-202ENST00000389645 MYO15BQ96JP2 1530 aa20.78■□□□□ 0.92
CAPRIN1-202ENST00000389645 NACADO15069 1562 aa20.74■□□□□ 0.91
CAPRIN1-202ENST00000389645 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
CAPRIN1-202ENST00000389645 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.84
CAPRIN1-202ENST00000389645 CECR2Q9BXF3 1484 aa20.27■□□□□ 0.84
CAPRIN1-202ENST00000389645 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
CAPRIN1-202ENST00000389645 UNC13AQ9UPW8 1703 aa20.21■□□□□ 0.83
CAPRIN1-202ENST00000389645 MROH2BQ7Z745 1585 aa20.1■□□□□ 0.81
CAPRIN1-202ENST00000389645 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
CAPRIN1-202ENST00000389645 BICRAQ9NZM4 1560 aa20.03■□□□□ 0.8
CAPRIN1-202ENST00000389645 WIZO95785 1651 aa19.95■□□□□ 0.78
CAPRIN1-202ENST00000389645 BAZ1AQ9NRL2 1556 aaPredicted RBP19.89■□□□□ 0.78
CAPRIN1-202ENST00000389645 SMARCA4P51532 1647 aa19.81■□□□□ 0.76
CAPRIN1-202ENST00000389645 PCGF6Q9BYE7 350 aa19.8■□□□□ 0.76
CAPRIN1-202ENST00000389645 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
CAPRIN1-202ENST00000389645 EHMT2Q96KQ7 1210 aa19.74■□□□□ 0.75
CAPRIN1-202ENST00000389645 FAM9AQ8IZU1 332 aaPredicted RBP19.63■□□□□ 0.73
CAPRIN1-202ENST00000389645 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
CAPRIN1-202ENST00000389645 TRIM41Q8WV44 630 aa19.57■□□□□ 0.72
CAPRIN1-202ENST00000389645 CCDC88BA6NC98 1476 aa19.55■□□□□ 0.72
CAPRIN1-202ENST00000389645 ATAD2BQ9ULI0 1458 aa19.51■□□□□ 0.71
CAPRIN1-202ENST00000389645 SMARCA2P51531 1590 aa19.47■□□□□ 0.71
CAPRIN1-202ENST00000389645 HRCP23327 699 aa19.42■□□□□ 0.7
CAPRIN1-202ENST00000389645 PEG3Q9GZU2 1588 aa19.42■□□□□ 0.7
CAPRIN1-202ENST00000389645 BAZ1BQ9UIG0 1483 aaKnown RBP19.42■□□□□ 0.7
CAPRIN1-202ENST00000389645 EIF4G1Q04637 1599 aaKnown RBP19.41■□□□□ 0.7
CAPRIN1-202ENST00000389645 PPARGC1BQ86YN6 1023 aaKnown RBP19.34■□□□□ 0.69
CAPRIN1-202ENST00000389645 ABCC8Q09428 1581 aa19.29■□□□□ 0.68
CAPRIN1-202ENST00000389645 NCAPD3P42695 1498 aa19.23■□□□□ 0.67
CAPRIN1-202ENST00000389645 TRIM26Q12899 539 aaPredicted RBP19.12■□□□□ 0.65
CAPRIN1-202ENST00000389645 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
CAPRIN1-202ENST00000389645 HMGXB3Q12766 1538 aa19.12■□□□□ 0.65
CAPRIN1-202ENST00000389645 TTBK1Q5TCY1 1321 aaPredicted RBP19.04■□□□□ 0.64
CAPRIN1-202ENST00000389645 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
CAPRIN1-202ENST00000389645 SOGA1O94964 1423 aa19■□□□□ 0.63
CAPRIN1-202ENST00000389645 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
CAPRIN1-202ENST00000389645 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
CAPRIN1-202ENST00000389645 SYNJ1O43426 1573 aa18.94■□□□□ 0.62
CAPRIN1-202ENST00000389645 PELP1Q8IZL8 1130 aaKnown RBP18.9■□□□□ 0.62
CAPRIN1-202ENST00000389645 CFTRP13569 1480 aa18.89■□□□□ 0.61
CAPRIN1-202ENST00000389645 CADPSQ9ULU8 1353 aa18.85■□□□□ 0.61
CAPRIN1-202ENST00000389645 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
CAPRIN1-202ENST00000389645 NESP48681 1621 aa18.77■□□□□ 0.6
CAPRIN1-202ENST00000389645 UBTFP17480 764 aaKnown RBP18.76■□□□□ 0.59
CAPRIN1-202ENST00000389645 CUX1P39880 1505 aa18.75■□□□□ 0.59
CAPRIN1-202ENST00000389645 TOP2BQ02880 1626 aa18.73■□□□□ 0.59
CAPRIN1-202ENST00000389645 EEA1Q15075 1411 aa18.69■□□□□ 0.58
CAPRIN1-202ENST00000389645 RANGAP1P46060 587 aaPredicted RBP18.68■□□□□ 0.58
CAPRIN1-202ENST00000389645 ZEB1P37275 1124 aaPredicted RBP18.65■□□□□ 0.58
CAPRIN1-202ENST00000389645 BIVM-ERCC5R4GMW8 1640 aa18.65■□□□□ 0.58
CAPRIN1-202ENST00000389645 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
CAPRIN1-202ENST00000389645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.64■□□□□ 0.57
CAPRIN1-202ENST00000389645 CCER1Q8TC90 406 aaPredicted RBP18.63■□□□□ 0.57
CAPRIN1-202ENST00000389645 PRDM2Q13029 1718 aa18.59■□□□□ 0.57
CAPRIN1-202ENST00000389645 TNIKQ9UKE5 1360 aa18.57■□□□□ 0.56
CAPRIN1-202ENST00000389645 GOLGA3Q08378 1498 aa18.56■□□□□ 0.56
CAPRIN1-202ENST00000389645 CEP162Q5TB80 1403 aa18.56■□□□□ 0.56
CAPRIN1-202ENST00000389645 RAPGEF2Q9Y4G8 1499 aa18.54■□□□□ 0.56
CAPRIN1-202ENST00000389645 CEP164Q9UPV0 1460 aa18.53■□□□□ 0.56
CAPRIN1-202ENST00000389645 FGD5Q6ZNL6 1462 aa18.53■□□□□ 0.56
CAPRIN1-202ENST00000389645 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
CAPRIN1-202ENST00000389645 CUX2O14529 1486 aa18.49■□□□□ 0.55
CAPRIN1-202ENST00000389645 LAMC3Q9Y6N6 1575 aa18.48■□□□□ 0.55
CAPRIN1-202ENST00000389645 SCAF1Q9H7N4 1312 aaKnown RBP18.47■□□□□ 0.55
CAPRIN1-202ENST00000389645 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.55
CAPRIN1-202ENST00000389645 KIF21BO75037 1637 aa18.45■□□□□ 0.54
CAPRIN1-202ENST00000389645 TOPBP1Q92547 1522 aa18.45■□□□□ 0.54
CAPRIN1-202ENST00000389645 PDS5BQ9NTI5 1447 aa18.44■□□□□ 0.54
CAPRIN1-202ENST00000389645 URB2Q14146 1524 aaKnown RBP18.41■□□□□ 0.54
CAPRIN1-202ENST00000389645 IGF1RP08069 1367 aa18.4■□□□□ 0.54
CAPRIN1-202ENST00000389645 PRXQ9BXM0 1461 aa18.4■□□□□ 0.54
CAPRIN1-202ENST00000389645 DNMBPQ6XZF7 1577 aa18.4■□□□□ 0.54
CAPRIN1-202ENST00000389645 POLA1P09884 1462 aaPredicted RBP18.4■□□□□ 0.54
CAPRIN1-202ENST00000389645 CLIP1P30622 1438 aa18.37■□□□□ 0.53
CAPRIN1-202ENST00000389645 KIF21AQ7Z4S6 1674 aa18.36■□□□□ 0.53
CAPRIN1-202ENST00000389645 APLP2Q06481 763 aa18.33■□□□□ 0.52
CAPRIN1-202ENST00000389645 TDRD9Q8NDG6 1382 aaKnown RBP18.32■□□□□ 0.52
CAPRIN1-202ENST00000389645 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
CAPRIN1-202ENST00000389645 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
CAPRIN1-202ENST00000389645 ERICH3Q5RHP9 1530 aa18.27■□□□□ 0.52
CAPRIN1-202ENST00000389645 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
CAPRIN1-202ENST00000389645 MYT1Q01538 1121 aa18.2■□□□□ 0.5
CAPRIN1-202ENST00000389645 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
CAPRIN1-202ENST00000389645 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
CAPRIN1-202ENST00000389645 MRC2Q9UBG0 1479 aa18.17■□□□□ 0.5
CAPRIN1-202ENST00000389645 VPS8Q8N3P4 1428 aa18.16■□□□□ 0.5
CAPRIN1-202ENST00000389645 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.5
CAPRIN1-202ENST00000389645 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.494e-7■■■■■ 34.7
CAPRIN1-202ENST00000389645 ARAP1Q96P48 1450 aa18.14■□□□□ 0.49
CAPRIN1-202ENST00000389645 DIEXFQ68CQ4 756 aaKnown RBP18.1■□□□□ 0.49
CAPRIN1-202ENST00000389645 ARHGAP35Q9NRY4 1499 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms