RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 NISCHQ9Y2I1 1504 aa36.52■■■■□ 3.44
TRAPPC12-201ENST00000324266 CCDC180Q9P1Z9 1646 aa31.8■■■□□ 2.68
TRAPPC12-201ENST00000324266 SHROOM4Q9ULL8 1493 aa31.44■■■□□ 2.62
TRAPPC12-201ENST00000324266 SUPT5HO00267 1087 aaKnown RBP30.96■■■□□ 2.55
TRAPPC12-201ENST00000324266 ZCCHC6Q5VYS8 1495 aaKnown RBP30.75■■■□□ 2.51
TRAPPC12-201ENST00000324266 PELP1Q8IZL8 1130 aaKnown RBP30.53■■■□□ 2.48
TRAPPC12-201ENST00000324266 ABCC9O60706 1549 aa30.48■■■□□ 2.47
TRAPPC12-201ENST00000324266 DCAF8L2P0C7V8 631 aa30.47■■■□□ 2.47
TRAPPC12-201ENST00000324266 CHIC1Q5VXU3 224 aa30.16■■■□□ 2.42
TRAPPC12-201ENST00000324266 MYO15BQ96JP2 1530 aa30.16■■■□□ 2.42
TRAPPC12-201ENST00000324266 DCAF1Q9Y4B6 1507 aa30.08■■■□□ 2.41
TRAPPC12-201ENST00000324266 HRCP23327 699 aa29.98■■■□□ 2.39
TRAPPC12-201ENST00000324266 NACADO15069 1562 aa29.71■■■□□ 2.35
TRAPPC12-201ENST00000324266 MYT1Q01538 1121 aa29.69■■■□□ 2.34
TRAPPC12-201ENST00000324266 PCGF6Q9BYE7 350 aa29.62■■■□□ 2.33
TRAPPC12-201ENST00000324266 RB1CC1Q8TDY2 1594 aa29.53■■■□□ 2.32
TRAPPC12-201ENST00000324266 SCRIBQ14160 1630 aa29.4■■■□□ 2.3
TRAPPC12-201ENST00000324266 LOC105371045A0A1W2PR82 267 aa29.39■■■□□ 2.3
TRAPPC12-201ENST00000324266 PPARGC1BQ86YN6 1023 aaKnown RBP29.23■■■□□ 2.27
TRAPPC12-201ENST00000324266 UNC13AQ9UPW8 1703 aa28.95■■■□□ 2.23
TRAPPC12-201ENST00000324266 RSF1Q96T23 1441 aaPredicted RBP28.91■■■□□ 2.22
TRAPPC12-201ENST00000324266 SCAF1Q9H7N4 1312 aaKnown RBP28.9■■■□□ 2.22
TRAPPC12-201ENST00000324266 TRIM26Q12899 539 aaPredicted RBP28.86■■■□□ 2.21
TRAPPC12-201ENST00000324266 PABPN1Q86U42 306 aaKnown RBP eCLIP28.79■■■□□ 2.2
TRAPPC12-201ENST00000324266 TRIM41Q8WV44 630 aa28.73■■■□□ 2.19
TRAPPC12-201ENST00000324266 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.18
TRAPPC12-201ENST00000324266 FAM9AQ8IZU1 332 aaPredicted RBP28.65■■■□□ 2.18
TRAPPC12-201ENST00000324266 EHMT2Q96KQ7 1210 aa28.5■■■□□ 2.15
TRAPPC12-201ENST00000324266 CECR2Q9BXF3 1484 aa28.49■■■□□ 2.15
TRAPPC12-201ENST00000324266 MROH2BQ7Z745 1585 aa28.32■■■□□ 2.12
TRAPPC12-201ENST00000324266 ZEB1P37275 1124 aaPredicted RBP28.28■■■□□ 2.12
TRAPPC12-201ENST00000324266 TTBK1Q5TCY1 1321 aaPredicted RBP28.2■■■□□ 2.1
TRAPPC12-201ENST00000324266 WIZO95785 1651 aa28.19■■■□□ 2.1
TRAPPC12-201ENST00000324266 BAZ1AQ9NRL2 1556 aaPredicted RBP28.18■■■□□ 2.1
TRAPPC12-201ENST00000324266 SMARCA4P51532 1647 aa28.1■■■□□ 2.09
TRAPPC12-201ENST00000324266 ACIN1Q9UKV3 1341 aaKnown RBP27.9■■■□□ 2.06
TRAPPC12-201ENST00000324266 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
TRAPPC12-201ENST00000324266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.78■■■□□ 2.04
TRAPPC12-201ENST00000324266 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
TRAPPC12-201ENST00000324266 NEUROD1Q13562 356 aa27.72■■■□□ 2.03
TRAPPC12-201ENST00000324266 ATAD2BQ9ULI0 1458 aa27.72■■■□□ 2.03
TRAPPC12-201ENST00000324266 PEG3Q9GZU2 1588 aa27.7■■■□□ 2.02
TRAPPC12-201ENST00000324266 CCDC88BA6NC98 1476 aa27.67■■■□□ 2.02
TRAPPC12-201ENST00000324266 CCER1Q8TC90 406 aaPredicted RBP27.67■■■□□ 2.02
TRAPPC12-201ENST00000324266 GTF3C3Q9Y5Q9 886 aa27.67■■■□□ 2.02
TRAPPC12-201ENST00000324266 TOP2AP11388 1531 aaKnown RBP27.65■■■□□ 2.02
TRAPPC12-201ENST00000324266 SMARCA2P51531 1590 aa27.63■■■□□ 2.01
TRAPPC12-201ENST00000324266 BAZ1BQ9UIG0 1483 aaKnown RBP27.55■■■□□ 2
TRAPPC12-201ENST00000324266 BCL11AQ9H165 835 aa27.54■■■□□ 2
TRAPPC12-201ENST00000324266 SOGA1O94964 1423 aa27.52■■■□□ 2
TRAPPC12-201ENST00000324266 CC2D2AQ9P2K1 1620 aa27.5■■□□□ 1.99
TRAPPC12-201ENST00000324266 CEP162Q5TB80 1403 aa27.49■■□□□ 1.99
TRAPPC12-201ENST00000324266 NCAPD3P42695 1498 aa27.47■■□□□ 1.99
TRAPPC12-201ENST00000324266 WRNQ14191 1432 aaPredicted RBP eCLIP27.45■■□□□ 1.99
TRAPPC12-201ENST00000324266 CENPBP07199 599 aaPredicted RBP27.43■■□□□ 1.98
TRAPPC12-201ENST00000324266 RUSC2Q8N2Y8 1516 aa27.4■■□□□ 1.98
TRAPPC12-201ENST00000324266 TNIKQ9UKE5 1360 aa27.38■■□□□ 1.97
TRAPPC12-201ENST00000324266 HMGXB3Q12766 1538 aa27.37■■□□□ 1.97
TRAPPC12-201ENST00000324266 CSRNP3Q8WYN3 585 aa27.36■■□□□ 1.97
TRAPPC12-201ENST00000324266 UBTFP17480 764 aaKnown RBP27.35■■□□□ 1.97
TRAPPC12-201ENST00000324266 DIEXFQ68CQ4 756 aaKnown RBP27.27■■□□□ 1.96
TRAPPC12-201ENST00000324266 EEA1Q15075 1411 aa27.24■■□□□ 1.95
TRAPPC12-201ENST00000324266 PRKCSHP14314 528 aaPredicted RBP27.24■■□□□ 1.95
TRAPPC12-201ENST00000324266 GOLGA3Q08378 1498 aa27.16■■□□□ 1.94
TRAPPC12-201ENST00000324266 DNAJC5BQ9UF47 199 aa27.14■■□□□ 1.94
TRAPPC12-201ENST00000324266 SYNJ1O43426 1573 aa27.01■■□□□ 1.91
TRAPPC12-201ENST00000324266 HNRNPUL2Q1KMD3 747 aaKnown RBP26.98■■□□□ 1.91
TRAPPC12-201ENST00000324266 CEP164Q9UPV0 1460 aa26.96■■□□□ 1.91
TRAPPC12-201ENST00000324266 ZNF316A6NFI3 1004 aaPredicted RBP26.96■■□□□ 1.91
TRAPPC12-201ENST00000324266 CLIP1P30622 1438 aa26.91■■□□□ 1.9
TRAPPC12-201ENST00000324266 KIF21BO75037 1637 aa26.89■■□□□ 1.9
TRAPPC12-201ENST00000324266 ANP32EQ9BTT0 268 aa26.88■■□□□ 1.89
TRAPPC12-201ENST00000324266 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
TRAPPC12-201ENST00000324266 CFTRP13569 1480 aa26.83■■□□□ 1.89
TRAPPC12-201ENST00000324266 RAPGEF2Q9Y4G8 1499 aa26.81■■□□□ 1.88
TRAPPC12-201ENST00000324266 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
TRAPPC12-201ENST00000324266 VPS8Q8N3P4 1428 aa26.8■■□□□ 1.88
TRAPPC12-201ENST00000324266 YTHDC1Q96MU7 727 aaKnown RBP26.76■■□□□ 1.87
TRAPPC12-201ENST00000324266 APLP2Q06481 763 aa26.75■■□□□ 1.87
TRAPPC12-201ENST00000324266 NESP48681 1621 aa26.71■■□□□ 1.87
TRAPPC12-201ENST00000324266 MIER1Q8N108 512 aa26.69■■□□□ 1.86
TRAPPC12-201ENST00000324266 ERICH6Q7L0X2 663 aa26.66■■□□□ 1.86
TRAPPC12-201ENST00000324266 TOP2BQ02880 1626 aa26.58■■□□□ 1.85
TRAPPC12-201ENST00000324266 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
TRAPPC12-201ENST00000324266 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
TRAPPC12-201ENST00000324266 FANCD2Q9BXW9 1451 aa26.51■■□□□ 1.83
TRAPPC12-201ENST00000324266 BIVM-ERCC5R4GMW8 1640 aa26.45■■□□□ 1.82
TRAPPC12-201ENST00000324266 KANK4Q5T7N3 995 aaPredicted RBP26.44■■□□□ 1.82
TRAPPC12-201ENST00000324266 ARAP1Q96P48 1450 aa26.44■■□□□ 1.82
TRAPPC12-201ENST00000324266 PRXQ9BXM0 1461 aa26.43■■□□□ 1.82
TRAPPC12-201ENST00000324266 CUX1P39880 1505 aa26.42■■□□□ 1.82
TRAPPC12-201ENST00000324266 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.82
TRAPPC12-201ENST00000324266 PDS5BQ9NTI5 1447 aa26.39■■□□□ 1.82
TRAPPC12-201ENST00000324266 DHX57Q6P158 1386 aaKnown RBP26.38■■□□□ 1.81
TRAPPC12-201ENST00000324266 TSHZ2Q9NRE2 1034 aa26.3■■□□□ 1.8
TRAPPC12-201ENST00000324266 KIF21AQ7Z4S6 1674 aa26.29■■□□□ 1.8
TRAPPC12-201ENST00000324266 CLSPNQ9HAW4 1339 aa26.28■■□□□ 1.8
TRAPPC12-201ENST00000324266 KIF27Q86VH2 1401 aa26.25■■□□□ 1.79
TRAPPC12-201ENST00000324266 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.78
TRAPPC12-201ENST00000324266 RRBP1Q9P2E9 1410 aaKnown RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms