RNA–Protein interactions for RNA: ENST00000565358.5

POLR3E-214, Transcript of RNA polymerase III subunit E, humanhuman

TSL 4

Gene POLR3E, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-214ENST00000565358 NISCHQ9Y2I1 1504 aa48.81■■■■■ 5.4
POLR3E-214ENST00000565358 CCDC180Q9P1Z9 1646 aa43.68■■■■■ 4.58
POLR3E-214ENST00000565358 ABCC9O60706 1549 aa43.07■■■■■ 4.48
POLR3E-214ENST00000565358 RB1CC1Q8TDY2 1594 aa41.26■■■■■ 4.2
POLR3E-214ENST00000565358 NACADO15069 1562 aa41.09■■■■■ 4.17
POLR3E-214ENST00000565358 DCAF8L2P0C7V8 631 aa40.82■■■■■ 4.13
POLR3E-214ENST00000565358 MYO15BQ96JP2 1530 aa40.68■■■■■ 4.1
POLR3E-214ENST00000565358 ZCCHC6Q5VYS8 1495 aaKnown RBP40.6■■■■■ 4.09
POLR3E-214ENST00000565358 UNC13AQ9UPW8 1703 aa40.45■■■■■ 4.07
POLR3E-214ENST00000565358 DCAF1Q9Y4B6 1507 aa40.37■■■■■ 4.05
POLR3E-214ENST00000565358 PABPN1Q86U42 306 aaKnown RBP eCLIP40.1■■■■■ 4.01
POLR3E-214ENST00000565358 BICRAQ9NZM4 1560 aa40.06■■■■■ 4
POLR3E-214ENST00000565358 DNAJC5BQ9UF47 199 aa39.84■■■■□ 3.97
POLR3E-214ENST00000565358 SCRIBQ14160 1630 aa39.81■■■■□ 3.96
POLR3E-214ENST00000565358 SHROOM4Q9ULL8 1493 aa39.56■■■■□ 3.92
POLR3E-214ENST00000565358 EIF4G1Q04637 1599 aaKnown RBP39.03■■■■□ 3.84
POLR3E-214ENST00000565358 CC2D2AQ9P2K1 1620 aa38.99■■■■□ 3.83
POLR3E-214ENST00000565358 CECR2Q9BXF3 1484 aa38.73■■■■□ 3.79
POLR3E-214ENST00000565358 SMARCA4P51532 1647 aa38.02■■■■□ 3.68
POLR3E-214ENST00000565358 BAZ1AQ9NRL2 1556 aaPredicted RBP37.88■■■■□ 3.65
POLR3E-214ENST00000565358 NCAPD3P42695 1498 aa37.87■■■■□ 3.65
POLR3E-214ENST00000565358 ATAD2BQ9ULI0 1458 aa37.86■■■■□ 3.65
POLR3E-214ENST00000565358 SMARCA2P51531 1590 aa37.81■■■■□ 3.64
POLR3E-214ENST00000565358 HMGXB3Q12766 1538 aa37.73■■■■□ 3.63
POLR3E-214ENST00000565358 PEG3Q9GZU2 1588 aa37.63■■■■□ 3.62
POLR3E-214ENST00000565358 MROH2BQ7Z745 1585 aa37.62■■■■□ 3.61
POLR3E-214ENST00000565358 BAZ1BQ9UIG0 1483 aaKnown RBP37.54■■■■□ 3.6
POLR3E-214ENST00000565358 WIZO95785 1651 aa37.25■■■■□ 3.55
POLR3E-214ENST00000565358 NESP48681 1621 aa37.16■■■■□ 3.54
POLR3E-214ENST00000565358 ERCC6Q03468 1493 aa37.15■■■■□ 3.54
POLR3E-214ENST00000565358 LAMC3Q9Y6N6 1575 aa37.01■■■■□ 3.52
POLR3E-214ENST00000565358 RSF1Q96T23 1441 aaPredicted RBP36.99■■■■□ 3.51
POLR3E-214ENST00000565358 CUX2O14529 1486 aa36.92■■■■□ 3.5
POLR3E-214ENST00000565358 KIF21AQ7Z4S6 1674 aa36.8■■■■□ 3.48
POLR3E-214ENST00000565358 TOP2AP11388 1531 aaKnown RBP36.8■■■■□ 3.48
POLR3E-214ENST00000565358 THOC2Q8NI27 1593 aaKnown RBP36.77■■■■□ 3.48
POLR3E-214ENST00000565358 CADPSQ9ULU8 1353 aa36.73■■■■□ 3.47
POLR3E-214ENST00000565358 PDS5BQ9NTI5 1447 aa36.7■■■■□ 3.47
POLR3E-214ENST00000565358 CFTRP13569 1480 aa36.46■■■■□ 3.43
POLR3E-214ENST00000565358 MRC2Q9UBG0 1479 aa36.42■■■■□ 3.42
POLR3E-214ENST00000565358 CEP164Q9UPV0 1460 aa36.37■■■■□ 3.41
POLR3E-214ENST00000565358 FANCD2Q9BXW9 1451 aa36.37■■■■□ 3.41
POLR3E-214ENST00000565358 WDR62O43379 1518 aa36.34■■■■□ 3.41
POLR3E-214ENST00000565358 PRDM2Q13029 1718 aa36.32■■■■□ 3.4
POLR3E-214ENST00000565358 CCDC88BA6NC98 1476 aa36.31■■■■□ 3.4
POLR3E-214ENST00000565358 DNAJC5Q9H3Z4 198 aa36.19■■■■□ 3.38
POLR3E-214ENST00000565358 URB2Q14146 1524 aaKnown RBP36.05■■■■□ 3.36
POLR3E-214ENST00000565358 TOPBP1Q92547 1522 aa35.75■■■■□ 3.31
POLR3E-214ENST00000565358 DNMBPQ6XZF7 1577 aa35.7■■■■□ 3.31
POLR3E-214ENST00000565358 ABCC8Q09428 1581 aa35.66■■■■□ 3.3
POLR3E-214ENST00000565358 SUPT5HO00267 1087 aaKnown RBP35.65■■■■□ 3.3
POLR3E-214ENST00000565358 IFT140Q96RY7 1462 aa35.6■■■■□ 3.29
POLR3E-214ENST00000565358 ZNF608Q9ULD9 1512 aaPredicted RBP35.51■■■■□ 3.27
POLR3E-214ENST00000565358 TARBP1Q13395 1621 aaKnown RBP35.43■■■■□ 3.26
POLR3E-214ENST00000565358 EIF4G3O43432 1585 aaKnown RBP35.42■■■■□ 3.26
POLR3E-214ENST00000565358 POLA1P09884 1462 aaPredicted RBP35.41■■■■□ 3.26
POLR3E-214ENST00000565358 CUX1P39880 1505 aa35.34■■■■□ 3.25
POLR3E-214ENST00000565358 FGD5Q6ZNL6 1462 aa35.28■■■■□ 3.24
POLR3E-214ENST00000565358 RAD54L2Q9Y4B4 1467 aa35.25■■■■□ 3.23
POLR3E-214ENST00000565358 AQRO60306 1485 aaKnown RBP eCLIP35.22■■■■□ 3.238e-7■■■□□ 15.6
POLR3E-214ENST00000565358 SOGA1O94964 1423 aa35.19■■■■□ 3.22
POLR3E-214ENST00000565358 OSCARQ8IYS5 282 aa35.19■■■■□ 3.22
POLR3E-214ENST00000565358 WDR97A6NE52 1622 aa35.12■■■■□ 3.21
POLR3E-214ENST00000565358 CHD1O14646 1710 aa35.09■■■■□ 3.21
POLR3E-214ENST00000565358 TDRD9Q8NDG6 1382 aaKnown RBP35.05■■■■□ 3.2
POLR3E-214ENST00000565358 BIVM-ERCC5R4GMW8 1640 aa34.95■■■■□ 3.19
POLR3E-214ENST00000565358 TOP2BQ02880 1626 aa34.93■■■■□ 3.18
POLR3E-214ENST00000565358 SNAPC4Q5SXM2 1469 aa34.93■■■■□ 3.18
POLR3E-214ENST00000565358 SYNJ1O43426 1573 aa34.92■■■■□ 3.18
POLR3E-214ENST00000565358 PBRM1Q86U86 1689 aa34.91■■■■□ 3.18
POLR3E-214ENST00000565358 WRNQ14191 1432 aaPredicted RBP eCLIP34.89■■■■□ 3.18
POLR3E-214ENST00000565358 ABCA10Q8WWZ4 1543 aa34.89■■■■□ 3.18
POLR3E-214ENST00000565358 GRIN2BQ13224 1484 aa34.87■■■■□ 3.17
POLR3E-214ENST00000565358 ABCA5Q8WWZ7 1642 aa34.87■■■■□ 3.17
POLR3E-214ENST00000565358 RIMBP3CA6NJZ7 1639 aa34.85■■■■□ 3.17
POLR3E-214ENST00000565358 RIMBP3BA6NNM3 1639 aa34.85■■■■□ 3.17
POLR3E-214ENST00000565358 RIMBP3Q9UFD9 1639 aa34.85■■■■□ 3.17
POLR3E-214ENST00000565358 MAGI1Q96QZ7 1491 aaPredicted RBP34.84■■■■□ 3.17
POLR3E-214ENST00000565358 TRIM41Q8WV44 630 aa34.84■■■■□ 3.17
POLR3E-214ENST00000565358 GAPVD1Q14C86 1478 aa34.82■■■■□ 3.16
POLR3E-214ENST00000565358 FBLN2P98095 1184 aa34.81■■■■□ 3.16
POLR3E-214ENST00000565358 ARHGEF11O15085 1522 aa34.77■■■■□ 3.16
POLR3E-214ENST00000565358 SYNJ2O15056 1496 aa34.71■■■■□ 3.15
POLR3E-214ENST00000565358 CLASP1Q7Z460 1538 aa34.65■■■■□ 3.14
POLR3E-214ENST00000565358 CHMP7Q8WUX9 453 aaPredicted RBP34.64■■■■□ 3.14
POLR3E-214ENST00000565358 ADAMTS12P58397 1594 aa34.57■■■■□ 3.13
POLR3E-214ENST00000565358 ERICH3Q5RHP9 1530 aa34.48■■■■□ 3.11
POLR3E-214ENST00000565358 ARAP1Q96P48 1450 aa34.46■■■■□ 3.11
POLR3E-214ENST00000565358 GRIN2AQ12879 1464 aa34.46■■■■□ 3.11
POLR3E-214ENST00000565358 FHAD1B1AJZ9 1412 aa34.38■■■■□ 3.09
POLR3E-214ENST00000565358 CEP170Q5SW79 1584 aa34.34■■■■□ 3.09
POLR3E-214ENST00000565358 CYB5RLQ6IPT4 315 aa34.34■■■■□ 3.09
POLR3E-214ENST00000565358 NUP160Q12769 1436 aa34.3■■■■□ 3.08
POLR3E-214ENST00000565358 KIF27Q86VH2 1401 aa34.18■■■■□ 3.06
POLR3E-214ENST00000565358 SHROOM2Q13796 1616 aa34.16■■■■□ 3.06
POLR3E-214ENST00000565358 CUL7Q14999 1698 aa34.14■■■■□ 3.06
POLR3E-214ENST00000565358 ERCC6L2Q5T890 1561 aa34.13■■■■□ 3.05
POLR3E-214ENST00000565358 RUSC2Q8N2Y8 1516 aa34.08■■■■□ 3.05
POLR3E-214ENST00000565358 IGF1RP08069 1367 aa34.06■■■■□ 3.04
POLR3E-214ENST00000565358 PRG4Q92954 1404 aaPredicted RBP33.89■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms