RNA–Protein interactions for RNA: ENST00000494302.5

ARHGAP4-222, Transcript of Rho GTPase activating protein 4, humanhuman

TSL 5

Gene ARHGAP4, Length 2,667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP4-222ENST00000494302 NISCHQ9Y2I1 1504 aa37.63■■■■□ 3.62
ARHGAP4-222ENST00000494302 CCDC180Q9P1Z9 1646 aa32.13■■■□□ 2.73
ARHGAP4-222ENST00000494302 SHROOM4Q9ULL8 1493 aa31.91■■■□□ 2.7
ARHGAP4-222ENST00000494302 ZCCHC6Q5VYS8 1495 aaKnown RBP31.8■■■□□ 2.68
ARHGAP4-222ENST00000494302 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
ARHGAP4-222ENST00000494302 SUPT5HO00267 1087 aaKnown RBP31.18■■■□□ 2.58
ARHGAP4-222ENST00000494302 DCAF1Q9Y4B6 1507 aa30.92■■■□□ 2.54
ARHGAP4-222ENST00000494302 CHIC1Q5VXU3 224 aa30.38■■■□□ 2.45
ARHGAP4-222ENST00000494302 MYO15BQ96JP2 1530 aa30.22■■■□□ 2.43
ARHGAP4-222ENST00000494302 SCRIBQ14160 1630 aa30.12■■■□□ 2.41
ARHGAP4-222ENST00000494302 ABCC9O60706 1549 aa30.02■■■□□ 2.4
ARHGAP4-222ENST00000494302 NACADO15069 1562 aa29.73■■■□□ 2.35
ARHGAP4-222ENST00000494302 RSF1Q96T23 1441 aaPredicted RBP29.7■■■□□ 2.34
ARHGAP4-222ENST00000494302 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
ARHGAP4-222ENST00000494302 LOC105371045A0A1W2PR82 267 aa29.4■■■□□ 2.3
ARHGAP4-222ENST00000494302 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.3
ARHGAP4-222ENST00000494302 HRCP23327 699 aa29.29■■■□□ 2.28
ARHGAP4-222ENST00000494302 MROH2BQ7Z745 1585 aa29.29■■■□□ 2.28
ARHGAP4-222ENST00000494302 PCGF6Q9BYE7 350 aa29.27■■■□□ 2.28
ARHGAP4-222ENST00000494302 WIZO95785 1651 aa29.13■■■□□ 2.25
ARHGAP4-222ENST00000494302 TRIM41Q8WV44 630 aa29.1■■■□□ 2.25
ARHGAP4-222ENST00000494302 UNC13AQ9UPW8 1703 aa28.99■■■□□ 2.23
ARHGAP4-222ENST00000494302 BAZ1AQ9NRL2 1556 aaPredicted RBP28.9■■■□□ 2.22
ARHGAP4-222ENST00000494302 TRIM26Q12899 539 aaPredicted RBP28.8■■■□□ 2.2
ARHGAP4-222ENST00000494302 FAM9AQ8IZU1 332 aaPredicted RBP28.79■■■□□ 2.2
ARHGAP4-222ENST00000494302 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
ARHGAP4-222ENST00000494302 PELP1Q8IZL8 1130 aaKnown RBP28.75■■■□□ 2.19
ARHGAP4-222ENST00000494302 EIF4G1Q04637 1599 aaKnown RBP28.66■■■□□ 2.18
ARHGAP4-222ENST00000494302 PABPN1Q86U42 306 aaKnown RBP eCLIP28.65■■■□□ 2.18
ARHGAP4-222ENST00000494302 TOP2AP11388 1531 aaKnown RBP28.62■■■□□ 2.17
ARHGAP4-222ENST00000494302 BICRAQ9NZM4 1560 aa28.62■■■□□ 2.17
ARHGAP4-222ENST00000494302 PPARGC1BQ86YN6 1023 aaKnown RBP28.61■■■□□ 2.17
ARHGAP4-222ENST00000494302 EHMT2Q96KQ7 1210 aa28.57■■■□□ 2.16
ARHGAP4-222ENST00000494302 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
ARHGAP4-222ENST00000494302 SMARCA2P51531 1590 aa28.49■■■□□ 2.15
ARHGAP4-222ENST00000494302 ABCC8Q09428 1581 aa28.39■■■□□ 2.13
ARHGAP4-222ENST00000494302 PEG3Q9GZU2 1588 aa28.18■■■□□ 2.1
ARHGAP4-222ENST00000494302 ZEB1P37275 1124 aaPredicted RBP28.16■■■□□ 2.1
ARHGAP4-222ENST00000494302 ATAD2BQ9ULI0 1458 aa28.05■■■□□ 2.08
ARHGAP4-222ENST00000494302 SOGA1O94964 1423 aa28.04■■■□□ 2.08
ARHGAP4-222ENST00000494302 EEA1Q15075 1411 aa27.96■■■□□ 2.07
ARHGAP4-222ENST00000494302 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.06
ARHGAP4-222ENST00000494302 RUSC2Q8N2Y8 1516 aa27.94■■■□□ 2.06
ARHGAP4-222ENST00000494302 WRNQ14191 1432 aaPredicted RBP eCLIP27.9■■■□□ 2.06
ARHGAP4-222ENST00000494302 TNIKQ9UKE5 1360 aa27.89■■■□□ 2.06
ARHGAP4-222ENST00000494302 CEP162Q5TB80 1403 aa27.89■■■□□ 2.06
ARHGAP4-222ENST00000494302 CSRNP3Q8WYN3 585 aa27.89■■■□□ 2.05
ARHGAP4-222ENST00000494302 MYT1Q01538 1121 aa27.87■■■□□ 2.05
ARHGAP4-222ENST00000494302 SYNJ1O43426 1573 aa27.82■■■□□ 2.04
ARHGAP4-222ENST00000494302 GOLGA3Q08378 1498 aa27.74■■■□□ 2.03
ARHGAP4-222ENST00000494302 UBTFP17480 764 aaKnown RBP27.71■■■□□ 2.03
ARHGAP4-222ENST00000494302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
ARHGAP4-222ENST00000494302 CEP164Q9UPV0 1460 aa27.59■■■□□ 2.01
ARHGAP4-222ENST00000494302 KIF21BO75037 1637 aa27.59■■■□□ 2.01
ARHGAP4-222ENST00000494302 TTBK1Q5TCY1 1321 aaPredicted RBP27.57■■■□□ 2
ARHGAP4-222ENST00000494302 CCER1Q8TC90 406 aaPredicted RBP27.54■■■□□ 2
ARHGAP4-222ENST00000494302 NCAPD3P42695 1498 aa27.52■■■□□ 2
ARHGAP4-222ENST00000494302 HMGXB3Q12766 1538 aa27.52■■■□□ 2
ARHGAP4-222ENST00000494302 TOP2BQ02880 1626 aa27.46■■□□□ 1.99
ARHGAP4-222ENST00000494302 SCAF1Q9H7N4 1312 aaKnown RBP27.4■■□□□ 1.98
ARHGAP4-222ENST00000494302 CLIP1P30622 1438 aa27.4■■□□□ 1.98
ARHGAP4-222ENST00000494302 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
ARHGAP4-222ENST00000494302 RAPGEF2Q9Y4G8 1499 aa27.37■■□□□ 1.97
ARHGAP4-222ENST00000494302 VPS8Q8N3P4 1428 aa27.29■■□□□ 1.96
ARHGAP4-222ENST00000494302 CUX1P39880 1505 aa27.28■■□□□ 1.96
ARHGAP4-222ENST00000494302 CFTRP13569 1480 aa27.24■■□□□ 1.95
ARHGAP4-222ENST00000494302 RANGAP1P46060 587 aaPredicted RBP27.21■■□□□ 1.95
ARHGAP4-222ENST00000494302 PRXQ9BXM0 1461 aa27.17■■□□□ 1.94
ARHGAP4-222ENST00000494302 ERICH3Q5RHP9 1530 aa27.17■■□□□ 1.94
ARHGAP4-222ENST00000494302 APLP2Q06481 763 aa27.08■■□□□ 1.93
ARHGAP4-222ENST00000494302 PRDM2Q13029 1718 aa27.05■■□□□ 1.92
ARHGAP4-222ENST00000494302 CC2D2AQ9P2K1 1620 aa27.04■■□□□ 1.92
ARHGAP4-222ENST00000494302 KIF27Q86VH2 1401 aa27.04■■□□□ 1.92
ARHGAP4-222ENST00000494302 HNRNPUL2Q1KMD3 747 aaKnown RBP27.03■■□□□ 1.92
ARHGAP4-222ENST00000494302 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
ARHGAP4-222ENST00000494302 CADPSQ9ULU8 1353 aa26.97■■□□□ 1.91
ARHGAP4-222ENST00000494302 DIEXFQ68CQ4 756 aaKnown RBP26.97■■□□□ 1.91
ARHGAP4-222ENST00000494302 CUX2O14529 1486 aa26.85■■□□□ 1.89
ARHGAP4-222ENST00000494302 ZNF316A6NFI3 1004 aaPredicted RBP26.83■■□□□ 1.89
ARHGAP4-222ENST00000494302 FGD5Q6ZNL6 1462 aa26.82■■□□□ 1.88
ARHGAP4-222ENST00000494302 KANK4Q5T7N3 995 aaPredicted RBP26.78■■□□□ 1.88
ARHGAP4-222ENST00000494302 ACIN1Q9UKV3 1341 aaKnown RBP26.78■■□□□ 1.88
ARHGAP4-222ENST00000494302 ARHGAP35Q9NRY4 1499 aa26.76■■□□□ 1.88
ARHGAP4-222ENST00000494302 IGF1RP08069 1367 aa26.76■■□□□ 1.87
ARHGAP4-222ENST00000494302 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
ARHGAP4-222ENST00000494302 NESP48681 1621 aa26.71■■□□□ 1.87
ARHGAP4-222ENST00000494302 RRBP1Q9P2E9 1410 aaKnown RBP26.65■■□□□ 1.86
ARHGAP4-222ENST00000494302 NEUROD1Q13562 356 aa26.64■■□□□ 1.86
ARHGAP4-222ENST00000494302 CARMIL1Q5VZK9 1371 aa26.63■■□□□ 1.85
ARHGAP4-222ENST00000494302 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
ARHGAP4-222ENST00000494302 DNAJC5BQ9UF47 199 aa26.61■■□□□ 1.85
ARHGAP4-222ENST00000494302 DHX57Q6P158 1386 aaKnown RBP26.58■■□□□ 1.85
ARHGAP4-222ENST00000494302 CLSPNQ9HAW4 1339 aa26.58■■□□□ 1.85
ARHGAP4-222ENST00000494302 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
ARHGAP4-222ENST00000494302 TOPBP1Q92547 1522 aa26.56■■□□□ 1.84
ARHGAP4-222ENST00000494302 CENPBP07199 599 aaPredicted RBP26.55■■□□□ 1.84
ARHGAP4-222ENST00000494302 POLA1P09884 1462 aaPredicted RBP26.53■■□□□ 1.84
ARHGAP4-222ENST00000494302 CCNB3Q8WWL7 1395 aa26.52■■□□□ 1.84
ARHGAP4-222ENST00000494302 MAP3K1Q13233 1512 aa26.49■■□□□ 1.83
ARHGAP4-222ENST00000494302 TIAM1Q13009 1591 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms