RNA–Protein interactions for RNA: ENST00000494397.5

ARHGAP4-223, Transcript of Rho GTPase activating protein 4, humanhuman

TSL 5

Gene ARHGAP4, Length 1,752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP4-223ENST00000494397 NISCHQ9Y2I1 1504 aa49.94■■■■■ 5.59
ARHGAP4-223ENST00000494397 CCDC180Q9P1Z9 1646 aa43.28■■■■■ 4.52
ARHGAP4-223ENST00000494397 ZCCHC6Q5VYS8 1495 aaKnown RBP42.06■■■■■ 4.32
ARHGAP4-223ENST00000494397 DCAF1Q9Y4B6 1507 aa41.32■■■■■ 4.21
ARHGAP4-223ENST00000494397 DCAF8L2P0C7V8 631 aa41.08■■■■■ 4.17
ARHGAP4-223ENST00000494397 SHROOM4Q9ULL8 1493 aa41.04■■■■■ 4.16
ARHGAP4-223ENST00000494397 MYO15BQ96JP2 1530 aa40.67■■■■■ 4.1
ARHGAP4-223ENST00000494397 ABCC9O60706 1549 aa40.56■■■■■ 4.08
ARHGAP4-223ENST00000494397 NACADO15069 1562 aa40.25■■■■■ 4.03
ARHGAP4-223ENST00000494397 SCRIBQ14160 1630 aa39.87■■■■□ 3.97
ARHGAP4-223ENST00000494397 RB1CC1Q8TDY2 1594 aa39.78■■■■□ 3.96
ARHGAP4-223ENST00000494397 SUPT5HO00267 1087 aaKnown RBP39.73■■■■□ 3.95
ARHGAP4-223ENST00000494397 RSF1Q96T23 1441 aaPredicted RBP38.94■■■■□ 3.82
ARHGAP4-223ENST00000494397 UNC13AQ9UPW8 1703 aa38.86■■■■□ 3.81
ARHGAP4-223ENST00000494397 CECR2Q9BXF3 1484 aa38.76■■■■□ 3.8
ARHGAP4-223ENST00000494397 MROH2BQ7Z745 1585 aa38.59■■■■□ 3.77
ARHGAP4-223ENST00000494397 BICRAQ9NZM4 1560 aa38.56■■■■□ 3.76
ARHGAP4-223ENST00000494397 BAZ1AQ9NRL2 1556 aaPredicted RBP38.53■■■■□ 3.76
ARHGAP4-223ENST00000494397 PABPN1Q86U42 306 aaKnown RBP eCLIP38.35■■■■□ 3.73
ARHGAP4-223ENST00000494397 CHIC1Q5VXU3 224 aa38.3■■■■□ 3.72
ARHGAP4-223ENST00000494397 SMARCA4P51532 1647 aa38.26■■■■□ 3.72
ARHGAP4-223ENST00000494397 WIZO95785 1651 aa38.25■■■■□ 3.71
ARHGAP4-223ENST00000494397 TOP2AP11388 1531 aaKnown RBP37.93■■■■□ 3.66
ARHGAP4-223ENST00000494397 PEG3Q9GZU2 1588 aa37.81■■■■□ 3.64
ARHGAP4-223ENST00000494397 SMARCA2P51531 1590 aa37.58■■■■□ 3.61
ARHGAP4-223ENST00000494397 ATAD2BQ9ULI0 1458 aa37.57■■■■□ 3.6
ARHGAP4-223ENST00000494397 CCDC88BA6NC98 1476 aa37.55■■■■□ 3.6
ARHGAP4-223ENST00000494397 EIF4G1Q04637 1599 aaKnown RBP37.45■■■■□ 3.59
ARHGAP4-223ENST00000494397 BAZ1BQ9UIG0 1483 aaKnown RBP37.37■■■■□ 3.57
ARHGAP4-223ENST00000494397 TRIM41Q8WV44 630 aa37.35■■■■□ 3.57
ARHGAP4-223ENST00000494397 NCAPD3P42695 1498 aa37.17■■■■□ 3.54
ARHGAP4-223ENST00000494397 HMGXB3Q12766 1538 aa37.14■■■■□ 3.54
ARHGAP4-223ENST00000494397 ABCC8Q09428 1581 aa36.87■■■■□ 3.49
ARHGAP4-223ENST00000494397 LOC105371045A0A1W2PR82 267 aa36.82■■■■□ 3.48
ARHGAP4-223ENST00000494397 CC2D2AQ9P2K1 1620 aa36.68■■■■□ 3.46
ARHGAP4-223ENST00000494397 FAM9AQ8IZU1 332 aaPredicted RBP36.64■■■■□ 3.46
ARHGAP4-223ENST00000494397 WRNQ14191 1432 aaPredicted RBP eCLIP36.64■■■■□ 3.46
ARHGAP4-223ENST00000494397 CFTRP13569 1480 aa36.48■■■■□ 3.43
ARHGAP4-223ENST00000494397 SYNJ1O43426 1573 aa36.43■■■■□ 3.42
ARHGAP4-223ENST00000494397 EEA1Q15075 1411 aa36.39■■■■□ 3.42
ARHGAP4-223ENST00000494397 SOGA1O94964 1423 aa36.33■■■■□ 3.41
ARHGAP4-223ENST00000494397 CADPSQ9ULU8 1353 aa36.26■■■■□ 3.4
ARHGAP4-223ENST00000494397 TOP2BQ02880 1626 aa36.26■■■■□ 3.39
ARHGAP4-223ENST00000494397 BIVM-ERCC5R4GMW8 1640 aa36.19■■■■□ 3.38
ARHGAP4-223ENST00000494397 PRDM2Q13029 1718 aa36.17■■■■□ 3.38
ARHGAP4-223ENST00000494397 RUSC2Q8N2Y8 1516 aa36.13■■■■□ 3.37
ARHGAP4-223ENST00000494397 CSRNP3Q8WYN3 585 aa36.12■■■■□ 3.37
ARHGAP4-223ENST00000494397 EHMT2Q96KQ7 1210 aa36.08■■■■□ 3.37
ARHGAP4-223ENST00000494397 CUX1P39880 1505 aa36.06■■■■□ 3.36
ARHGAP4-223ENST00000494397 GOLGA3Q08378 1498 aa35.88■■■■□ 3.33
ARHGAP4-223ENST00000494397 TNIKQ9UKE5 1360 aa35.87■■■■□ 3.33
ARHGAP4-223ENST00000494397 FANCD2Q9BXW9 1451 aa35.85■■■■□ 3.33
ARHGAP4-223ENST00000494397 CEP164Q9UPV0 1460 aa35.85■■■■□ 3.33
ARHGAP4-223ENST00000494397 KIF21BO75037 1637 aa35.84■■■■□ 3.33
ARHGAP4-223ENST00000494397 LAMC3Q9Y6N6 1575 aa35.8■■■■□ 3.32
ARHGAP4-223ENST00000494397 NESP48681 1621 aa35.74■■■■□ 3.31
ARHGAP4-223ENST00000494397 CEP162Q5TB80 1403 aa35.7■■■■□ 3.3
ARHGAP4-223ENST00000494397 KIF27Q86VH2 1401 aa35.68■■■■□ 3.3
ARHGAP4-223ENST00000494397 UBTFP17480 764 aaKnown RBP35.68■■■■□ 3.3
ARHGAP4-223ENST00000494397 PCGF6Q9BYE7 350 aa35.64■■■■□ 3.3
ARHGAP4-223ENST00000494397 DNAJC5BQ9UF47 199 aa35.63■■■■□ 3.29
ARHGAP4-223ENST00000494397 FGD5Q6ZNL6 1462 aa35.6■■■■□ 3.29
ARHGAP4-223ENST00000494397 DNMBPQ6XZF7 1577 aa35.59■■■■□ 3.29
ARHGAP4-223ENST00000494397 PRXQ9BXM0 1461 aa35.57■■■■□ 3.28
ARHGAP4-223ENST00000494397 RAPGEF2Q9Y4G8 1499 aa35.56■■■■□ 3.28
ARHGAP4-223ENST00000494397 TRIM26Q12899 539 aaPredicted RBP35.56■■■■□ 3.28
ARHGAP4-223ENST00000494397 PDS5BQ9NTI5 1447 aa35.55■■■■□ 3.28
ARHGAP4-223ENST00000494397 ERICH3Q5RHP9 1530 aa35.53■■■■□ 3.28
ARHGAP4-223ENST00000494397 TOPBP1Q92547 1522 aa35.5■■■■□ 3.27
ARHGAP4-223ENST00000494397 CUX2O14529 1486 aa35.47■■■■□ 3.27
ARHGAP4-223ENST00000494397 POLA1P09884 1462 aaPredicted RBP35.37■■■■□ 3.25
ARHGAP4-223ENST00000494397 URB2Q14146 1524 aaKnown RBP35.36■■■■□ 3.25
ARHGAP4-223ENST00000494397 CLIP1P30622 1438 aa35.32■■■■□ 3.25
ARHGAP4-223ENST00000494397 IGF1RP08069 1367 aa35.32■■■■□ 3.24
ARHGAP4-223ENST00000494397 ABCA10Q8WWZ4 1543 aa35.32■■■■□ 3.24
ARHGAP4-223ENST00000494397 RAD54L2Q9Y4B4 1467 aa35.25■■■■□ 3.23
ARHGAP4-223ENST00000494397 KIF21AQ7Z4S6 1674 aa35.24■■■■□ 3.23
ARHGAP4-223ENST00000494397 CARMIL1Q5VZK9 1371 aa35.14■■■■□ 3.22
ARHGAP4-223ENST00000494397 VPS8Q8N3P4 1428 aa35.09■■■■□ 3.21
ARHGAP4-223ENST00000494397 WDR97A6NE52 1622 aa35.08■■■■□ 3.21
ARHGAP4-223ENST00000494397 MRC2Q9UBG0 1479 aa35.05■■■■□ 3.2
ARHGAP4-223ENST00000494397 PPARGC1BQ86YN6 1023 aaKnown RBP35.03■■■■□ 3.2
ARHGAP4-223ENST00000494397 HRCP23327 699 aa35.02■■■■□ 3.2
ARHGAP4-223ENST00000494397 CUL7Q14999 1698 aa34.96■■■■□ 3.19
ARHGAP4-223ENST00000494397 ABCA5Q8WWZ7 1642 aa34.95■■■■□ 3.19
ARHGAP4-223ENST00000494397 RANGAP1P46060 587 aaPredicted RBP34.92■■■■□ 3.18
ARHGAP4-223ENST00000494397 ARAP1Q96P48 1450 aa34.91■■■■□ 3.18
ARHGAP4-223ENST00000494397 TARBP1Q13395 1621 aaKnown RBP34.9■■■■□ 3.18
ARHGAP4-223ENST00000494397 GAPVD1Q14C86 1478 aa34.88■■■■□ 3.17
ARHGAP4-223ENST00000494397 TDRD9Q8NDG6 1382 aaKnown RBP34.88■■■■□ 3.17
ARHGAP4-223ENST00000494397 WDR62O43379 1518 aa34.84■■■■□ 3.17
ARHGAP4-223ENST00000494397 ARHGAP35Q9NRY4 1499 aa34.81■■■■□ 3.16
ARHGAP4-223ENST00000494397 APLP2Q06481 763 aa34.74■■■■□ 3.15
ARHGAP4-223ENST00000494397 ERCC6Q03468 1493 aa34.73■■■■□ 3.15
ARHGAP4-223ENST00000494397 IFT140Q96RY7 1462 aa34.71■■■■□ 3.15
ARHGAP4-223ENST00000494397 TTBK1Q5TCY1 1321 aaPredicted RBP34.66■■■■□ 3.14
ARHGAP4-223ENST00000494397 THOC2Q8NI27 1593 aaKnown RBP34.59■■■■□ 3.13
ARHGAP4-223ENST00000494397 CTTNBP2Q8WZ74 1663 aa34.57■■■■□ 3.12
ARHGAP4-223ENST00000494397 AQRO60306 1485 aaKnown RBP eCLIP34.57■■■■□ 3.121e-8■■■■□ 23.4
ARHGAP4-223ENST00000494397 PBRM1Q86U86 1689 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms