Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SVIPQ8NHG7 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC8.83□□□□□ -1
SVIPQ8NHG7 SLIT2-212ENST00000622093 6380 ntTSL 5 BASIC8.83□□□□□ -1
SVIPQ8NHG7 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC8.83□□□□□ -1
SVIPQ8NHG7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
SVIPQ8NHG7 FCRLA-210ENST00000367959 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SVIPQ8NHG7 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC8.83□□□□□ -1
SVIPQ8NHG7 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC8.83□□□□□ -1
SVIPQ8NHG7 E2F3-202ENST00000535432 4425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SVIPQ8NHG7 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC8.83□□□□□ -1
SVIPQ8NHG7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC8.83□□□□□ -1
SVIPQ8NHG7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC8.83□□□□□ -1
SVIPQ8NHG7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC8.83□□□□□ -1
SVIPQ8NHG7 LRRC8B-202ENST00000358200 1957 ntTSL 5 BASIC8.82□□□□□ -1
SVIPQ8NHG7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
SVIPQ8NHG7 SIRPB1-202ENST00000279477 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC8.82□□□□□ -1
SVIPQ8NHG7 NXF1-211ENST00000531709 4128 ntTSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC8.82□□□□□ -1
SVIPQ8NHG7 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC8.82□□□□□ -1
SVIPQ8NHG7 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 RAPGEFL1-201ENST00000264644 3429 ntTSL 5 BASIC8.82□□□□□ -1
SVIPQ8NHG7 TCP10L-201ENST00000300258 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC8.82□□□□□ -1
SVIPQ8NHG7 AC112512.1-201ENST00000398957 1428 ntTSL 2 BASIC8.82□□□□□ -1
SVIPQ8NHG7 AL121929.2-201ENST00000609691 1432 ntBASIC8.82□□□□□ -1
SVIPQ8NHG7 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC8.82□□□□□ -1
SVIPQ8NHG7 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 GOLGA8VP-201ENST00000559009 1798 ntBASIC8.82□□□□□ -1
SVIPQ8NHG7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC8.82□□□□□ -1
SVIPQ8NHG7 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC8.82□□□□□ -1
SVIPQ8NHG7 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 CNN2P8-201ENST00000421872 913 ntBASIC8.82□□□□□ -1
SVIPQ8NHG7 PRAC2-202ENST00000432056 504 ntAPPRIS P4 TSL 2 BASIC8.82□□□□□ -1
SVIPQ8NHG7 TXK-203ENST00000507351 1153 ntTSL 2 BASIC8.82□□□□□ -1
SVIPQ8NHG7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC8.82□□□□□ -1
SVIPQ8NHG7 RN7SL819P-201ENST00000581896 270 ntBASIC8.82□□□□□ -1
SVIPQ8NHG7 AD000813.1-201ENST00000624007 832 ntBASIC8.82□□□□□ -1
SVIPQ8NHG7 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC8.82□□□□□ -1
SVIPQ8NHG7 KDM4D-202ENST00000536741 2737 ntAPPRIS P1 TSL 4 BASIC8.82□□□□□ -1
SVIPQ8NHG7 SLC6A12-203ENST00000424061 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 UTP14A-201ENST00000394422 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 C1GALT1C1-201ENST00000304661 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC8.82□□□□□ -1
SVIPQ8NHG7 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC8.82□□□□□ -1
SVIPQ8NHG7 PFDN1-201ENST00000261813 1352 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 FP565260.3-202ENST00000623960 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 OR3A2-206ENST00000642052 1748 ntAPPRIS P1 BASIC8.82□□□□□ -1
SVIPQ8NHG7 LRAT-201ENST00000336356 4928 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 RBMY1A1-201ENST00000303902 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 RBMY1D-203ENST00000418956 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 RBMY1B-203ENST00000619219 1491 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
SVIPQ8NHG7 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 POLE3-202ENST00000374171 2191 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
SVIPQ8NHG7 CAVIN4-201ENST00000307584 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 RBM23-215ENST00000555209 2278 ntTSL 1 (best) BASIC8.82□□□□□ -1
SVIPQ8NHG7 LINC02533-201ENST00000563079 2272 ntTSL 4 BASIC8.82□□□□□ -1
SVIPQ8NHG7 AC092368.3-202ENST00000574180 1591 ntBASIC8.82□□□□□ -1
SVIPQ8NHG7 AL512590.2-201ENST00000531758 1341 ntBASIC8.81□□□□□ -1
SVIPQ8NHG7 CPEB1-216ENST00000618449 2459 ntTSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 BANK1-201ENST00000322953 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC8.81□□□□□ -1
SVIPQ8NHG7 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 XPO6-208ENST00000565698 4255 ntTSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 AHCYL2-210ENST00000490911 1884 ntAPPRIS ALT1 TSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 FAM71A-201ENST00000294829 2305 ntAPPRIS P1 BASIC8.81□□□□□ -1
SVIPQ8NHG7 HIST1H2BG-201ENST00000541790 1534 ntAPPRIS P1 BASIC8.81□□□□□ -1
SVIPQ8NHG7 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 SMIM15-201ENST00000339020 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 GRIK1-205ENST00000399909 3427 ntTSL 5 BASIC8.81□□□□□ -1
SVIPQ8NHG7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 AIF1L-207ENST00000372309 3515 ntTSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 ZMIZ2-201ENST00000265346 3643 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
SVIPQ8NHG7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC8.81□□□□□ -1
SVIPQ8NHG7 PMS2P2-201ENST00000425039 1128 ntBASIC8.81□□□□□ -1
SVIPQ8NHG7 AC097381.1-201ENST00000429019 1296 ntBASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms