RNA–Protein interactions for RNA: ENST00000376925.7

CST3-201, Transcript of cystatin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CST3, Length 873 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST3-201ENST00000376925 NISCHQ9Y2I1 1504 aa42.25■■■■■ 4.35
CST3-201ENST00000376925 CCDC180Q9P1Z9 1646 aa38.09■■■■□ 3.69
CST3-201ENST00000376925 ABCC9O60706 1549 aa38.08■■■■□ 3.69
CST3-201ENST00000376925 RB1CC1Q8TDY2 1594 aa36.22■■■■□ 3.39
CST3-201ENST00000376925 NACADO15069 1562 aa35.9■■■■□ 3.34
CST3-201ENST00000376925 DNAJC5BQ9UF47 199 aa35.64■■■■□ 3.3
CST3-201ENST00000376925 UNC13AQ9UPW8 1703 aa35.63■■■■□ 3.29
CST3-201ENST00000376925 DCAF8L2P0C7V8 631 aa35.57■■■■□ 3.28
CST3-201ENST00000376925 PABPN1Q86U42 306 aaKnown RBP eCLIP35.33■■■■□ 3.25
CST3-201ENST00000376925 MYO15BQ96JP2 1530 aa35.32■■■■□ 3.25
CST3-201ENST00000376925 BICRAQ9NZM4 1560 aa35.2■■■■□ 3.23
CST3-201ENST00000376925 ZCCHC6Q5VYS8 1495 aaKnown RBP35.06■■■■□ 3.2
CST3-201ENST00000376925 DCAF1Q9Y4B6 1507 aa34.96■■■■□ 3.19
CST3-201ENST00000376925 SCRIBQ14160 1630 aa34.73■■■■□ 3.15
CST3-201ENST00000376925 SHROOM4Q9ULL8 1493 aa34.62■■■■□ 3.13
CST3-201ENST00000376925 CC2D2AQ9P2K1 1620 aa34.44■■■■□ 3.1
CST3-201ENST00000376925 EIF4G1Q04637 1599 aaKnown RBP34.33■■■■□ 3.09
CST3-201ENST00000376925 CECR2Q9BXF3 1484 aa34.27■■■■□ 3.08
CST3-201ENST00000376925 SMARCA4P51532 1647 aa33.08■■■□□ 2.89
CST3-201ENST00000376925 NCAPD3P42695 1498 aa33.05■■■□□ 2.88
CST3-201ENST00000376925 ATAD2BQ9ULI0 1458 aa33.01■■■□□ 2.88
CST3-201ENST00000376925 SMARCA2P51531 1590 aa32.96■■■□□ 2.87
CST3-201ENST00000376925 HMGXB3Q12766 1538 aa32.94■■■□□ 2.86
CST3-201ENST00000376925 ERCC6Q03468 1493 aa32.88■■■□□ 2.85
CST3-201ENST00000376925 BAZ1AQ9NRL2 1556 aaPredicted RBP32.83■■■□□ 2.85
CST3-201ENST00000376925 CUX2O14529 1486 aa32.8■■■□□ 2.84
CST3-201ENST00000376925 BAZ1BQ9UIG0 1483 aaKnown RBP32.74■■■□□ 2.83
CST3-201ENST00000376925 DNAJC5Q9H3Z4 198 aa32.72■■■□□ 2.83
CST3-201ENST00000376925 NESP48681 1621 aa32.71■■■□□ 2.83
CST3-201ENST00000376925 PEG3Q9GZU2 1588 aa32.69■■■□□ 2.82
CST3-201ENST00000376925 MROH2BQ7Z745 1585 aa32.59■■■□□ 2.81
CST3-201ENST00000376925 THOC2Q8NI27 1593 aaKnown RBP32.49■■■□□ 2.79
CST3-201ENST00000376925 LAMC3Q9Y6N6 1575 aa32.45■■■□□ 2.79
CST3-201ENST00000376925 KIF21AQ7Z4S6 1674 aa32.43■■■□□ 2.78
CST3-201ENST00000376925 WIZO95785 1651 aa32.28■■■□□ 2.76
CST3-201ENST00000376925 PDS5BQ9NTI5 1447 aa32.15■■■□□ 2.74
CST3-201ENST00000376925 CADPSQ9ULU8 1353 aa32.04■■■□□ 2.72
CST3-201ENST00000376925 MRC2Q9UBG0 1479 aa31.97■■■□□ 2.71
CST3-201ENST00000376925 WDR62O43379 1518 aa31.94■■■□□ 2.7
CST3-201ENST00000376925 RSF1Q96T23 1441 aaPredicted RBP31.92■■■□□ 2.7
CST3-201ENST00000376925 CEP164Q9UPV0 1460 aa31.84■■■□□ 2.69
CST3-201ENST00000376925 TOP2AP11388 1531 aaKnown RBP31.81■■■□□ 2.68
CST3-201ENST00000376925 FANCD2Q9BXW9 1451 aa31.78■■■□□ 2.68
CST3-201ENST00000376925 CFTRP13569 1480 aa31.71■■■□□ 2.67
CST3-201ENST00000376925 PRDM2Q13029 1718 aa31.69■■■□□ 2.66
CST3-201ENST00000376925 URB2Q14146 1524 aaKnown RBP31.55■■■□□ 2.64
CST3-201ENST00000376925 TRIM41Q8WV44 630 aa31.38■■■□□ 2.61
CST3-201ENST00000376925 CCDC88BA6NC98 1476 aa31.37■■■□□ 2.61
CST3-201ENST00000376925 TOPBP1Q92547 1522 aa31.19■■■□□ 2.58
CST3-201ENST00000376925 ZNF608Q9ULD9 1512 aaPredicted RBP31.18■■■□□ 2.58
CST3-201ENST00000376925 IFT140Q96RY7 1462 aa31.15■■■□□ 2.58
CST3-201ENST00000376925 OSCARQ8IYS5 282 aa31.13■■■□□ 2.57
CST3-201ENST00000376925 EIF4G3O43432 1585 aaKnown RBP31.12■■■□□ 2.57
CST3-201ENST00000376925 DNMBPQ6XZF7 1577 aa31.11■■■□□ 2.57
CST3-201ENST00000376925 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
CST3-201ENST00000376925 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
CST3-201ENST00000376925 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
CST3-201ENST00000376925 ABCC8Q09428 1581 aa31■■■□□ 2.55
CST3-201ENST00000376925 TARBP1Q13395 1621 aaKnown RBP30.97■■■□□ 2.55
CST3-201ENST00000376925 CHD1O14646 1710 aa30.96■■■□□ 2.55
CST3-201ENST00000376925 POLA1P09884 1462 aaPredicted RBP30.86■■■□□ 2.53
CST3-201ENST00000376925 ARHGEF11O15085 1522 aa30.86■■■□□ 2.53
CST3-201ENST00000376925 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.538e-11■■■■□ 26.1
CST3-201ENST00000376925 RAD54L2Q9Y4B4 1467 aa30.74■■■□□ 2.51
CST3-201ENST00000376925 FGD5Q6ZNL6 1462 aa30.67■■■□□ 2.5
CST3-201ENST00000376925 CUX1P39880 1505 aa30.65■■■□□ 2.5
CST3-201ENST00000376925 SUPT5HO00267 1087 aaKnown RBP30.62■■■□□ 2.49
CST3-201ENST00000376925 SOGA1O94964 1423 aa30.62■■■□□ 2.49
CST3-201ENST00000376925 WDR97A6NE52 1622 aa30.61■■■□□ 2.49
CST3-201ENST00000376925 TDRD9Q8NDG6 1382 aaKnown RBP30.59■■■□□ 2.49
CST3-201ENST00000376925 SNAPC4Q5SXM2 1469 aa30.58■■■□□ 2.49
CST3-201ENST00000376925 FBLN2P98095 1184 aa30.58■■■□□ 2.49
CST3-201ENST00000376925 ARAP1Q96P48 1450 aa30.55■■■□□ 2.48
CST3-201ENST00000376925 PBRM1Q86U86 1689 aa30.53■■■□□ 2.48
CST3-201ENST00000376925 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
CST3-201ENST00000376925 CYB5RLQ6IPT4 315 aa30.47■■■□□ 2.47
CST3-201ENST00000376925 MAGI1Q96QZ7 1491 aaPredicted RBP30.44■■■□□ 2.46
CST3-201ENST00000376925 SYNJ1O43426 1573 aa30.43■■■□□ 2.46
CST3-201ENST00000376925 GRIN2BQ13224 1484 aa30.42■■■□□ 2.46
CST3-201ENST00000376925 ABCA5Q8WWZ7 1642 aa30.36■■■□□ 2.45
CST3-201ENST00000376925 SYNJ2O15056 1496 aa30.34■■■□□ 2.45
CST3-201ENST00000376925 GAPVD1Q14C86 1478 aa30.31■■■□□ 2.44
CST3-201ENST00000376925 CHMP7Q8WUX9 453 aaPredicted RBP30.29■■■□□ 2.44
CST3-201ENST00000376925 ABCA10Q8WWZ4 1543 aa30.27■■■□□ 2.44
CST3-201ENST00000376925 BIVM-ERCC5R4GMW8 1640 aa30.2■■■□□ 2.43
CST3-201ENST00000376925 TRHP20396 242 aaPredicted RBP30.18■■■□□ 2.42
CST3-201ENST00000376925 ADAMTS12P58397 1594 aa30.15■■■□□ 2.42
CST3-201ENST00000376925 TOP2BQ02880 1626 aa30.15■■■□□ 2.42
CST3-201ENST00000376925 WRNQ14191 1432 aaPredicted RBP eCLIP30.13■■■□□ 2.41
CST3-201ENST00000376925 GRIN2AQ12879 1464 aa30.07■■■□□ 2.4
CST3-201ENST00000376925 CEP170Q5SW79 1584 aa30.04■■■□□ 2.4
CST3-201ENST00000376925 ERCC6L2Q5T890 1561 aa30.03■■■□□ 2.4
CST3-201ENST00000376925 NUP160Q12769 1436 aa29.93■■■□□ 2.38
CST3-201ENST00000376925 SHROOM2Q13796 1616 aa29.92■■■□□ 2.38
CST3-201ENST00000376925 ERICH3Q5RHP9 1530 aa29.91■■■□□ 2.38
CST3-201ENST00000376925 FHAD1B1AJZ9 1412 aa29.88■■■□□ 2.37
CST3-201ENST00000376925 RUSC2Q8N2Y8 1516 aa29.74■■■□□ 2.35
CST3-201ENST00000376925 KIF13AQ9H1H9 1805 aa29.66■■■□□ 2.34
CST3-201ENST00000376925 PRG4Q92954 1404 aaPredicted RBP29.63■■■□□ 2.33
CST3-201ENST00000376925 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms