RNA–Protein interactions for RNA: ENST00000622093.4

SLIT2-212, Transcript of slit guidance ligand 2, humanhuman

TSL 5 BASIC

Gene SLIT2, Length 6,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-212ENST00000622093 DCAF8L2P0C7V8 631 aa21.16■□□□□ 0.98
SLIT2-212ENST00000622093 NISCHQ9Y2I1 1504 aa19.5■□□□□ 0.71
SLIT2-212ENST00000622093 SUPT5HO00267 1087 aaKnown RBP19.41■□□□□ 0.7
SLIT2-212ENST00000622093 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
SLIT2-212ENST00000622093 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
SLIT2-212ENST00000622093 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
SLIT2-212ENST00000622093 FAM9AQ8IZU1 332 aaPredicted RBP18.47■□□□□ 0.55
SLIT2-212ENST00000622093 TTBK1Q5TCY1 1321 aaPredicted RBP18.43■□□□□ 0.54
SLIT2-212ENST00000622093 APLP2Q06481 763 aa18.42■□□□□ 0.54
SLIT2-212ENST00000622093 ATP1B4Q9UN42 357 aaPredicted RBP18.31■□□□□ 0.52
SLIT2-212ENST00000622093 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
SLIT2-212ENST00000622093 UBTFP17480 764 aaKnown RBP17.84■□□□□ 0.45
SLIT2-212ENST00000622093 MYT1LQ9UL68 1186 aa17.84■□□□□ 0.45
SLIT2-212ENST00000622093 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
SLIT2-212ENST00000622093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.43
SLIT2-212ENST00000622093 HNRNPUL2Q1KMD3 747 aaKnown RBP17.71■□□□□ 0.43
SLIT2-212ENST00000622093 PCGF6Q9BYE7 350 aa17.67■□□□□ 0.42
SLIT2-212ENST00000622093 ABCC9O60706 1549 aa17.65■□□□□ 0.42
SLIT2-212ENST00000622093 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
SLIT2-212ENST00000622093 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
SLIT2-212ENST00000622093 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
SLIT2-212ENST00000622093 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
SLIT2-212ENST00000622093 CCER1Q8TC90 406 aaPredicted RBP17.41■□□□□ 0.38
SLIT2-212ENST00000622093 ITGAEP38570 1179 aa17.39■□□□□ 0.37
SLIT2-212ENST00000622093 FBLN2P98095 1184 aa17.28■□□□□ 0.36
SLIT2-212ENST00000622093 POLR3GLQ9BT43 218 aa17.28■□□□□ 0.36
SLIT2-212ENST00000622093 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
SLIT2-212ENST00000622093 CNGB1Q14028 1251 aaPredicted RBP17.15■□□□□ 0.34
SLIT2-212ENST00000622093 MYT1Q01538 1121 aa17.07■□□□□ 0.32
SLIT2-212ENST00000622093 YTHDC1Q96MU7 727 aaKnown RBP17.06■□□□□ 0.32
SLIT2-212ENST00000622093 CENPBP07199 599 aaPredicted RBP17.02■□□□□ 0.31
SLIT2-212ENST00000622093 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
SLIT2-212ENST00000622093 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
SLIT2-212ENST00000622093 LOC105371045A0A1W2PR82 267 aa16.93■□□□□ 0.3
SLIT2-212ENST00000622093 FAM50AQ14320 339 aaKnown RBP16.91■□□□□ 0.3
SLIT2-212ENST00000622093 ZEB1P37275 1124 aaPredicted RBP16.88■□□□□ 0.29
SLIT2-212ENST00000622093 BCANQ96GW7 911 aa16.86■□□□□ 0.29
SLIT2-212ENST00000622093 TRIM52Q96A61 297 aa16.84■□□□□ 0.29
SLIT2-212ENST00000622093 NEFLP07196 543 aa16.79■□□□□ 0.28
SLIT2-212ENST00000622093 P3H3Q8IVL6 736 aa16.77■□□□□ 0.28
SLIT2-212ENST00000622093 SCRIBQ14160 1630 aa16.68■□□□□ 0.26
SLIT2-212ENST00000622093 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
SLIT2-212ENST00000622093 TRIM26Q12899 539 aaPredicted RBP16.65■□□□□ 0.26
SLIT2-212ENST00000622093 ZNF777Q9ULD5 760 aaPredicted RBP16.65■□□□□ 0.26
SLIT2-212ENST00000622093 SLC24A1O60721 1099 aa16.64■□□□□ 0.25
SLIT2-212ENST00000622093 NEUROD1Q13562 356 aa16.63■□□□□ 0.25
SLIT2-212ENST00000622093 ESF1Q9H501 851 aaKnown RBP16.61■□□□□ 0.25
SLIT2-212ENST00000622093 NPM1P06748 294 aaKnown RBP eCLIP16.54■□□□□ 0.24
SLIT2-212ENST00000622093 DAXXQ9UER7 740 aaPredicted RBP16.5■□□□□ 0.23
SLIT2-212ENST00000622093 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
SLIT2-212ENST00000622093 CHGAP10645 457 aaKnown RBP16.44■□□□□ 0.22
SLIT2-212ENST00000622093 BCL11AQ9H165 835 aa16.41■□□□□ 0.22
SLIT2-212ENST00000622093 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
SLIT2-212ENST00000622093 CHMP7Q8WUX9 453 aaPredicted RBP16.33■□□□□ 0.2
SLIT2-212ENST00000622093 CLSPNQ9HAW4 1339 aa16.31■□□□□ 0.2
SLIT2-212ENST00000622093 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
SLIT2-212ENST00000622093 CDK11AQ9UQ88 783 aaPredicted RBP16.3■□□□□ 0.2
SLIT2-212ENST00000622093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.27■□□□□ 0.2
SLIT2-212ENST00000622093 PLEKHG5O94827 1062 aa16.26■□□□□ 0.19
SLIT2-212ENST00000622093 HRCP23327 699 aa16.24■□□□□ 0.19
SLIT2-212ENST00000622093 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
SLIT2-212ENST00000622093 KCNH8Q96L42 1107 aa16.2■□□□□ 0.18
SLIT2-212ENST00000622093 RB1CC1Q8TDY2 1594 aa16.19■□□□□ 0.18
SLIT2-212ENST00000622093 ERCC6Q03468 1493 aa16.19■□□□□ 0.18
SLIT2-212ENST00000622093 A0A0G2JS52 829 aa16.19■□□□□ 0.18
SLIT2-212ENST00000622093 NEFMP07197 916 aa16.18■□□□□ 0.18
SLIT2-212ENST00000622093 ARID4BQ4LE39 1312 aaPredicted RBP16.17■□□□□ 0.18
SLIT2-212ENST00000622093 TRHP20396 242 aaPredicted RBP16.15■□□□□ 0.18
SLIT2-212ENST00000622093 ZBTB47Q9UFB7 747 aaPredicted RBP16.14■□□□□ 0.17
SLIT2-212ENST00000622093 CHIC2Q9UKJ5 165 aa16.14■□□□□ 0.17
SLIT2-212ENST00000622093 ZNF316A6NFI3 1004 aaPredicted RBP16.13■□□□□ 0.17
SLIT2-212ENST00000622093 ZBTB7CA1YPR0 619 aa16.13■□□□□ 0.17
SLIT2-212ENST00000622093 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
SLIT2-212ENST00000622093 RTL5Q5HYW3 569 aaPredicted RBP16.1■□□□□ 0.17
SLIT2-212ENST00000622093 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
SLIT2-212ENST00000622093 C14orf37Q86TY3 774 aa16.05■□□□□ 0.16
SLIT2-212ENST00000622093 ANP32CO43423 234 aa16.04■□□□□ 0.16
SLIT2-212ENST00000622093 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.15
SLIT2-212ENST00000622093 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
SLIT2-212ENST00000622093 PPP1R15AO75807 674 aaPredicted RBP15.98■□□□□ 0.15
SLIT2-212ENST00000622093 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
SLIT2-212ENST00000622093 TSPY4P0CV99 314 aa15.94■□□□□ 0.14
SLIT2-212ENST00000622093 TSPY10P0CW01 314 aa15.94■□□□□ 0.14
SLIT2-212ENST00000622093 HAP1P54257 671 aaPredicted RBP15.92■□□□□ 0.14
SLIT2-212ENST00000622093 BAZ1BQ9UIG0 1483 aaKnown RBP15.9■□□□□ 0.14
SLIT2-212ENST00000622093 MTUS2Q5JR59 1369 aa15.87■□□□□ 0.13
SLIT2-212ENST00000622093 PLEKHD1A6NEE1 506 aa15.84■□□□□ 0.13
SLIT2-212ENST00000622093 MLECQ14165 292 aa15.83■□□□□ 0.12
SLIT2-212ENST00000622093 SALL2Q9Y467 1007 aaPredicted RBP15.83■□□□□ 0.12
SLIT2-212ENST00000622093 TONSLQ96HA7 1378 aa15.82■□□□□ 0.12
SLIT2-212ENST00000622093 RRP7BPQ9NSQ0 103 aa15.81■□□□□ 0.12
SLIT2-212ENST00000622093 NACADO15069 1562 aa15.8■□□□□ 0.12
SLIT2-212ENST00000622093 LMOD2Q6P5Q4 547 aa15.76■□□□□ 0.11
SLIT2-212ENST00000622093 GTF3C3Q9Y5Q9 886 aa15.75■□□□□ 0.11
SLIT2-212ENST00000622093 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
SLIT2-212ENST00000622093 RGL3Q3MIN7 710 aa15.73■□□□□ 0.11
SLIT2-212ENST00000622093 ARXQ96QS3 562 aa15.73■□□□□ 0.11
SLIT2-212ENST00000622093 TMC1Q8TDI8 760 aa15.71■□□□□ 0.11
SLIT2-212ENST00000622093 NPM2Q86SE8 214 aaKnown RBP15.7■□□□□ 0.1
SLIT2-212ENST00000622093 FAM9BQ8IZU0 186 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms