RNA–Protein interactions for RNA: ENST00000358200.5

LRRC8B-202, Transcript of leucine rich repeat containing 8 VRAC subunit B, humanhuman

TSL 5 BASIC

Gene LRRC8B, Length 1,957 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8B-202ENST00000358200 NISCHQ9Y2I1 1504 aa23.75■■□□□ 1.39
LRRC8B-202ENST00000358200 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
LRRC8B-202ENST00000358200 ABCC9O60706 1549 aa20.24■□□□□ 0.83
LRRC8B-202ENST00000358200 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
LRRC8B-202ENST00000358200 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
LRRC8B-202ENST00000358200 NACADO15069 1562 aa19.68■□□□□ 0.74
LRRC8B-202ENST00000358200 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
LRRC8B-202ENST00000358200 MYO15BQ96JP2 1530 aa19.65■□□□□ 0.74
LRRC8B-202ENST00000358200 SHROOM4Q9ULL8 1493 aa19.64■□□□□ 0.74
LRRC8B-202ENST00000358200 RB1CC1Q8TDY2 1594 aa19.63■□□□□ 0.73
LRRC8B-202ENST00000358200 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.71
LRRC8B-202ENST00000358200 HRCP23327 699 aa19.4■□□□□ 0.7
LRRC8B-202ENST00000358200 CHIC1Q5VXU3 224 aa19.36■□□□□ 0.69
LRRC8B-202ENST00000358200 UNC13AQ9UPW8 1703 aa19.17■□□□□ 0.66
LRRC8B-202ENST00000358200 SCRIBQ14160 1630 aa19.15■□□□□ 0.66
LRRC8B-202ENST00000358200 BICRAQ9NZM4 1560 aa19■□□□□ 0.63
LRRC8B-202ENST00000358200 PABPN1Q86U42 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
LRRC8B-202ENST00000358200 PCGF6Q9BYE7 350 aa18.94■□□□□ 0.62
LRRC8B-202ENST00000358200 TRIM26Q12899 539 aaPredicted RBP18.77■□□□□ 0.6
LRRC8B-202ENST00000358200 ZEB1P37275 1124 aaPredicted RBP18.7■□□□□ 0.58
LRRC8B-202ENST00000358200 LOC105371045A0A1W2PR82 267 aa18.6■□□□□ 0.57
LRRC8B-202ENST00000358200 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
LRRC8B-202ENST00000358200 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
LRRC8B-202ENST00000358200 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
LRRC8B-202ENST00000358200 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
LRRC8B-202ENST00000358200 PELP1Q8IZL8 1130 aaKnown RBP18.44■□□□□ 0.54
LRRC8B-202ENST00000358200 BAZ1AQ9NRL2 1556 aaPredicted RBP18.39■□□□□ 0.53
LRRC8B-202ENST00000358200 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
LRRC8B-202ENST00000358200 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
LRRC8B-202ENST00000358200 CC2D2AQ9P2K1 1620 aa18.33■□□□□ 0.53
LRRC8B-202ENST00000358200 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
LRRC8B-202ENST00000358200 MROH2BQ7Z745 1585 aa18.3■□□□□ 0.52
LRRC8B-202ENST00000358200 SMARCA2P51531 1590 aa18.2■□□□□ 0.5
LRRC8B-202ENST00000358200 ATAD2BQ9ULI0 1458 aa18.19■□□□□ 0.5
LRRC8B-202ENST00000358200 PEG3Q9GZU2 1588 aa18.18■□□□□ 0.5
LRRC8B-202ENST00000358200 NCAPD3P42695 1498 aa18.15■□□□□ 0.5
LRRC8B-202ENST00000358200 WIZO95785 1651 aa18.12■□□□□ 0.49
LRRC8B-202ENST00000358200 HMGXB3Q12766 1538 aa18.07■□□□□ 0.48
LRRC8B-202ENST00000358200 BAZ1BQ9UIG0 1483 aaKnown RBP18.06■□□□□ 0.48
LRRC8B-202ENST00000358200 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
LRRC8B-202ENST00000358200 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.46
LRRC8B-202ENST00000358200 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
LRRC8B-202ENST00000358200 FAM9AQ8IZU1 332 aaPredicted RBP17.92■□□□□ 0.46
LRRC8B-202ENST00000358200 EEA1Q15075 1411 aa17.81■□□□□ 0.44
LRRC8B-202ENST00000358200 ACIN1Q9UKV3 1341 aaKnown RBP17.8■□□□□ 0.44
LRRC8B-202ENST00000358200 CCER1Q8TC90 406 aaPredicted RBP17.77■□□□□ 0.44
LRRC8B-202ENST00000358200 TNIKQ9UKE5 1360 aa17.75■□□□□ 0.43
LRRC8B-202ENST00000358200 MYT1Q01538 1121 aa17.75■□□□□ 0.43
LRRC8B-202ENST00000358200 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
LRRC8B-202ENST00000358200 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
LRRC8B-202ENST00000358200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
LRRC8B-202ENST00000358200 DIEXFQ68CQ4 756 aaKnown RBP17.66■□□□□ 0.42
LRRC8B-202ENST00000358200 CEP162Q5TB80 1403 aa17.65■□□□□ 0.42
LRRC8B-202ENST00000358200 CADPSQ9ULU8 1353 aa17.64■□□□□ 0.41
LRRC8B-202ENST00000358200 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
LRRC8B-202ENST00000358200 NEUROD1Q13562 356 aa17.6■□□□□ 0.41
LRRC8B-202ENST00000358200 NESP48681 1621 aa17.59■□□□□ 0.41
LRRC8B-202ENST00000358200 CFTRP13569 1480 aa17.58■□□□□ 0.4
LRRC8B-202ENST00000358200 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
LRRC8B-202ENST00000358200 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
LRRC8B-202ENST00000358200 GOLGA3Q08378 1498 aa17.53■□□□□ 0.4
LRRC8B-202ENST00000358200 ZNF316A6NFI3 1004 aaPredicted RBP17.53■□□□□ 0.4
LRRC8B-202ENST00000358200 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
LRRC8B-202ENST00000358200 PDS5BQ9NTI5 1447 aa17.51■□□□□ 0.39
LRRC8B-202ENST00000358200 PRDM2Q13029 1718 aa17.49■□□□□ 0.39
LRRC8B-202ENST00000358200 SOGA1O94964 1423 aa17.48■□□□□ 0.39
LRRC8B-202ENST00000358200 GTF3C3Q9Y5Q9 886 aa17.48■□□□□ 0.39
LRRC8B-202ENST00000358200 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
LRRC8B-202ENST00000358200 KIF21BO75037 1637 aa17.43■□□□□ 0.38
LRRC8B-202ENST00000358200 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
LRRC8B-202ENST00000358200 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
LRRC8B-202ENST00000358200 KIF21AQ7Z4S6 1674 aa17.41■□□□□ 0.38
LRRC8B-202ENST00000358200 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
LRRC8B-202ENST00000358200 CLSPNQ9HAW4 1339 aa17.36■□□□□ 0.37
LRRC8B-202ENST00000358200 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
LRRC8B-202ENST00000358200 VPS8Q8N3P4 1428 aa17.31■□□□□ 0.36
LRRC8B-202ENST00000358200 MRC2Q9UBG0 1479 aa17.29■□□□□ 0.36
LRRC8B-202ENST00000358200 CLIP1P30622 1438 aa17.27■□□□□ 0.36
LRRC8B-202ENST00000358200 THOC2Q8NI27 1593 aaKnown RBP17.26■□□□□ 0.35
LRRC8B-202ENST00000358200 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
LRRC8B-202ENST00000358200 WDR62O43379 1518 aa17.21■□□□□ 0.35
LRRC8B-202ENST00000358200 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
LRRC8B-202ENST00000358200 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
LRRC8B-202ENST00000358200 APLP2Q06481 763 aa17.19■□□□□ 0.34
LRRC8B-202ENST00000358200 TOPBP1Q92547 1522 aa17.17■□□□□ 0.34
LRRC8B-202ENST00000358200 MIER1Q8N108 512 aa17.16■□□□□ 0.34
LRRC8B-202ENST00000358200 CUX2O14529 1486 aa17.15■□□□□ 0.34
LRRC8B-202ENST00000358200 CUX1P39880 1505 aa17.14■□□□□ 0.33
LRRC8B-202ENST00000358200 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
LRRC8B-202ENST00000358200 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
LRRC8B-202ENST00000358200 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
LRRC8B-202ENST00000358200 BIVM-ERCC5R4GMW8 1640 aa17.09■□□□□ 0.33
LRRC8B-202ENST00000358200 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
LRRC8B-202ENST00000358200 AEBP2Q6ZN18 517 aaPredicted RBP17.09■□□□□ 0.33
LRRC8B-202ENST00000358200 RAPGEF2Q9Y4G8 1499 aa17.07■□□□□ 0.32
LRRC8B-202ENST00000358200 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
LRRC8B-202ENST00000358200 PRXQ9BXM0 1461 aa17.04■□□□□ 0.32
LRRC8B-202ENST00000358200 POLA1P09884 1462 aaPredicted RBP17.04■□□□□ 0.32
LRRC8B-202ENST00000358200 DHX57Q6P158 1386 aaKnown RBP17.02■□□□□ 0.31
LRRC8B-202ENST00000358200 RRBP1Q9P2E9 1410 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms