RNA–Protein interactions for RNA: ENST00000526995.5

TRAF6-202, Transcript of TNF receptor associated factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF6, Length 4,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6-202ENST00000526995 NISCHQ9Y2I1 1504 aa24■■□□□ 1.43
TRAF6-202ENST00000526995 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.38
TRAF6-202ENST00000526995 SUPT5HO00267 1087 aaKnown RBP22.59■■□□□ 1.21
TRAF6-202ENST00000526995 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
TRAF6-202ENST00000526995 EHMT2Q96KQ7 1210 aa21.46■■□□□ 1.03
TRAF6-202ENST00000526995 FAM9AQ8IZU1 332 aaPredicted RBP21.19■□□□□ 0.98
TRAF6-202ENST00000526995 APLP2Q06481 763 aa21.15■□□□□ 0.98
TRAF6-202ENST00000526995 TRIM41Q8WV44 630 aa21.03■□□□□ 0.96
TRAF6-202ENST00000526995 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
TRAF6-202ENST00000526995 TTBK1Q5TCY1 1321 aaPredicted RBP20.72■□□□□ 0.91
TRAF6-202ENST00000526995 UBTFP17480 764 aaKnown RBP20.64■□□□□ 0.89
TRAF6-202ENST00000526995 RANGAP1P46060 587 aaPredicted RBP20.63■□□□□ 0.89
TRAF6-202ENST00000526995 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
TRAF6-202ENST00000526995 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
TRAF6-202ENST00000526995 CCER1Q8TC90 406 aaPredicted RBP20.42■□□□□ 0.86
TRAF6-202ENST00000526995 ATP1B4Q9UN42 357 aaPredicted RBP20.41■□□□□ 0.86
TRAF6-202ENST00000526995 PELP1Q8IZL8 1130 aaKnown RBP20.4■□□□□ 0.86
TRAF6-202ENST00000526995 ABCC9O60706 1549 aa20.38■□□□□ 0.85
TRAF6-202ENST00000526995 TRIM26Q12899 539 aaPredicted RBP20.22■□□□□ 0.83
TRAF6-202ENST00000526995 LOC105371045A0A1W2PR82 267 aa20.19■□□□□ 0.82
TRAF6-202ENST00000526995 PPARGC1BQ86YN6 1023 aaKnown RBP20.16■□□□□ 0.82
TRAF6-202ENST00000526995 PABPN1Q86U42 306 aaKnown RBP eCLIP20.13■□□□□ 0.81
TRAF6-202ENST00000526995 CENPBP07199 599 aaPredicted RBP20.09■□□□□ 0.81
TRAF6-202ENST00000526995 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
TRAF6-202ENST00000526995 HRCP23327 699 aa19.91■□□□□ 0.78
TRAF6-202ENST00000526995 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.76
TRAF6-202ENST00000526995 ITGAEP38570 1179 aa19.8■□□□□ 0.76
TRAF6-202ENST00000526995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
TRAF6-202ENST00000526995 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
TRAF6-202ENST00000526995 YTHDC1Q96MU7 727 aaKnown RBP19.64■□□□□ 0.74
TRAF6-202ENST00000526995 SCRIBQ14160 1630 aa19.64■□□□□ 0.73
TRAF6-202ENST00000526995 NEFLP07196 543 aa19.59■□□□□ 0.73
TRAF6-202ENST00000526995 MYT1LQ9UL68 1186 aa19.52■□□□□ 0.71
TRAF6-202ENST00000526995 CSRNP3Q8WYN3 585 aa19.5■□□□□ 0.71
TRAF6-202ENST00000526995 FAM50AQ14320 339 aaKnown RBP19.43■□□□□ 0.7
TRAF6-202ENST00000526995 ERICH6Q7L0X2 663 aa19.4■□□□□ 0.7
TRAF6-202ENST00000526995 POLR3GLQ9BT43 218 aa19.34■□□□□ 0.69
TRAF6-202ENST00000526995 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
TRAF6-202ENST00000526995 DIEXFQ68CQ4 756 aaKnown RBP19.27■□□□□ 0.68
TRAF6-202ENST00000526995 TRIM52Q96A61 297 aa19.24■□□□□ 0.67
TRAF6-202ENST00000526995 FBLN2P98095 1184 aa19.23■□□□□ 0.67
TRAF6-202ENST00000526995 NACADO15069 1562 aa19.21■□□□□ 0.67
TRAF6-202ENST00000526995 P3H3Q8IVL6 736 aa19.17■□□□□ 0.66
TRAF6-202ENST00000526995 RSF1Q96T23 1441 aaPredicted RBP19.16■□□□□ 0.66
TRAF6-202ENST00000526995 NEUROD1Q13562 356 aa19.15■□□□□ 0.66
TRAF6-202ENST00000526995 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
TRAF6-202ENST00000526995 CNGB1Q14028 1251 aaPredicted RBP19.1■□□□□ 0.65
TRAF6-202ENST00000526995 CDK11AQ9UQ88 783 aaPredicted RBP19■□□□□ 0.63
TRAF6-202ENST00000526995 ZNF316A6NFI3 1004 aaPredicted RBP18.99■□□□□ 0.63
TRAF6-202ENST00000526995 ARID3CA6NKF2 412 aa18.97■□□□□ 0.63
TRAF6-202ENST00000526995 SLC4A1APQ9BWU0 796 aaKnown RBP18.93■□□□□ 0.62
TRAF6-202ENST00000526995 EEA1Q15075 1411 aa18.91■□□□□ 0.62
TRAF6-202ENST00000526995 ZNF326Q5BKZ1 582 aaKnown RBP18.91■□□□□ 0.62
TRAF6-202ENST00000526995 ANP32CO43423 234 aa18.89■□□□□ 0.61
TRAF6-202ENST00000526995 BAZ1BQ9UIG0 1483 aaKnown RBP18.86■□□□□ 0.61
TRAF6-202ENST00000526995 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
TRAF6-202ENST00000526995 ZNF777Q9ULD5 760 aaPredicted RBP18.85■□□□□ 0.61
TRAF6-202ENST00000526995 CLIP1P30622 1438 aa18.82■□□□□ 0.6
TRAF6-202ENST00000526995 WRNQ14191 1432 aaPredicted RBP eCLIP18.82■□□□□ 0.6
TRAF6-202ENST00000526995 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
TRAF6-202ENST00000526995 DAXXQ9UER7 740 aaPredicted RBP18.79■□□□□ 0.6
TRAF6-202ENST00000526995 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
TRAF6-202ENST00000526995 MYT1Q01538 1121 aa18.78■□□□□ 0.6
TRAF6-202ENST00000526995 GOLGA3Q08378 1498 aa18.76■□□□□ 0.59
TRAF6-202ENST00000526995 CEP162Q5TB80 1403 aa18.7■□□□□ 0.58
TRAF6-202ENST00000526995 TONSLQ96HA7 1378 aa18.7■□□□□ 0.58
TRAF6-202ENST00000526995 MTUS2Q5JR59 1369 aa18.68■□□□□ 0.58
TRAF6-202ENST00000526995 GTF3C3Q9Y5Q9 886 aa18.67■□□□□ 0.58
TRAF6-202ENST00000526995 KIF27Q86VH2 1401 aa18.66■□□□□ 0.58
TRAF6-202ENST00000526995 CHMP7Q8WUX9 453 aaPredicted RBP18.66■□□□□ 0.58
TRAF6-202ENST00000526995 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
TRAF6-202ENST00000526995 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
TRAF6-202ENST00000526995 NPM1P06748 294 aaKnown RBP eCLIP18.59■□□□□ 0.57
TRAF6-202ENST00000526995 CHIC2Q9UKJ5 165 aa18.59■□□□□ 0.57
TRAF6-202ENST00000526995 CLSPNQ9HAW4 1339 aa18.57■□□□□ 0.56
TRAF6-202ENST00000526995 MROH2BQ7Z745 1585 aa18.56■□□□□ 0.56
TRAF6-202ENST00000526995 ACIN1Q9UKV3 1341 aaKnown RBP18.55■□□□□ 0.56
TRAF6-202ENST00000526995 TSPY4P0CV99 314 aa18.55■□□□□ 0.56
TRAF6-202ENST00000526995 TSPY10P0CW01 314 aa18.55■□□□□ 0.56
TRAF6-202ENST00000526995 BCANQ96GW7 911 aa18.53■□□□□ 0.56
TRAF6-202ENST00000526995 DDX10Q13206 875 aaKnown RBP18.46■□□□□ 0.55
TRAF6-202ENST00000526995 CCDC88BA6NC98 1476 aa18.45■□□□□ 0.54
TRAF6-202ENST00000526995 ESF1Q9H501 851 aaKnown RBP18.43■□□□□ 0.54
TRAF6-202ENST00000526995 PLEKHD1A6NEE1 506 aa18.41■□□□□ 0.54
TRAF6-202ENST00000526995 CHGAP10645 457 aaKnown RBP18.41■□□□□ 0.54
TRAF6-202ENST00000526995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.54
TRAF6-202ENST00000526995 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
TRAF6-202ENST00000526995 SOGA1O94964 1423 aa18.41■□□□□ 0.54
TRAF6-202ENST00000526995 NEFMP07197 916 aa18.4■□□□□ 0.54
TRAF6-202ENST00000526995 RRP7BPQ9NSQ0 103 aa18.38■□□□□ 0.53
TRAF6-202ENST00000526995 RTL5Q5HYW3 569 aaPredicted RBP18.35■□□□□ 0.53
TRAF6-202ENST00000526995 CARMIL1Q5VZK9 1371 aa18.35■□□□□ 0.53
TRAF6-202ENST00000526995 CUX2O14529 1486 aa18.35■□□□□ 0.53
TRAF6-202ENST00000526995 STAG3Q9UJ98 1225 aa18.34■□□□□ 0.53
TRAF6-202ENST00000526995 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
TRAF6-202ENST00000526995 HNRNPUQ00839 825 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRAF6-202ENST00000526995 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
TRAF6-202ENST00000526995 ERCC6Q03468 1493 aa18.3■□□□□ 0.52
TRAF6-202ENST00000526995 TOP2AP11388 1531 aaKnown RBP18.3■□□□□ 0.52
TRAF6-202ENST00000526995 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms