RNA–Protein interactions for RNA: ENST00000565698.5

XPO6-208, Transcript of exportin 6, humanhuman

TSL 2 BASIC

Gene XPO6, Length 4,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPO6-208ENST00000565698 NISCHQ9Y2I1 1504 aa23.71■■□□□ 1.39
XPO6-208ENST00000565698 DCAF8L2P0C7V8 631 aa20.54■□□□□ 0.88
XPO6-208ENST00000565698 SHROOM4Q9ULL8 1493 aa20.36■□□□□ 0.85
XPO6-208ENST00000565698 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
XPO6-208ENST00000565698 SUPT5HO00267 1087 aaKnown RBP19.93■□□□□ 0.78
XPO6-208ENST00000565698 ZCCHC6Q5VYS8 1495 aaKnown RBP19.91■□□□□ 0.78
XPO6-208ENST00000565698 ABCC9O60706 1549 aa19.44■□□□□ 0.7
XPO6-208ENST00000565698 DCAF1Q9Y4B6 1507 aa19.33■□□□□ 0.68
XPO6-208ENST00000565698 SCRIBQ14160 1630 aa19.09■□□□□ 0.65
XPO6-208ENST00000565698 NACADO15069 1562 aa18.93■□□□□ 0.62
XPO6-208ENST00000565698 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
XPO6-208ENST00000565698 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.61
XPO6-208ENST00000565698 RB1CC1Q8TDY2 1594 aa18.78■□□□□ 0.6
XPO6-208ENST00000565698 RSF1Q96T23 1441 aaPredicted RBP18.67■□□□□ 0.58
XPO6-208ENST00000565698 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.584e-6■■□□□ 11.7
XPO6-208ENST00000565698 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
XPO6-208ENST00000565698 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
XPO6-208ENST00000565698 FAM9AQ8IZU1 332 aaPredicted RBP18.49■□□□□ 0.55
XPO6-208ENST00000565698 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
XPO6-208ENST00000565698 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
XPO6-208ENST00000565698 LOC105371045A0A1W2PR82 267 aa18.4■□□□□ 0.54
XPO6-208ENST00000565698 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
XPO6-208ENST00000565698 WIZO95785 1651 aa18.24■□□□□ 0.51
XPO6-208ENST00000565698 PCGF6Q9BYE7 350 aa18.15■□□□□ 0.5
XPO6-208ENST00000565698 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
XPO6-208ENST00000565698 UNC13AQ9UPW8 1703 aa18.04■□□□□ 0.48
XPO6-208ENST00000565698 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
XPO6-208ENST00000565698 BICRAQ9NZM4 1560 aa17.98■□□□□ 0.47
XPO6-208ENST00000565698 CCDC88BA6NC98 1476 aa17.98■□□□□ 0.47
XPO6-208ENST00000565698 BAZ1BQ9UIG0 1483 aaKnown RBP17.9■□□□□ 0.46
XPO6-208ENST00000565698 UBTFP17480 764 aaKnown RBP17.87■□□□□ 0.45
XPO6-208ENST00000565698 SMARCA2P51531 1590 aa17.83■□□□□ 0.44
XPO6-208ENST00000565698 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
XPO6-208ENST00000565698 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
XPO6-208ENST00000565698 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
XPO6-208ENST00000565698 PPARGC1BQ86YN6 1023 aaKnown RBP17.78■□□□□ 0.44
XPO6-208ENST00000565698 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
XPO6-208ENST00000565698 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
XPO6-208ENST00000565698 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.43
XPO6-208ENST00000565698 RANGAP1P46060 587 aaPredicted RBP17.71■□□□□ 0.43
XPO6-208ENST00000565698 HRCP23327 699 aa17.69■□□□□ 0.42
XPO6-208ENST00000565698 PELP1Q8IZL8 1130 aaKnown RBP17.67■□□□□ 0.42
XPO6-208ENST00000565698 SOGA1O94964 1423 aa17.63■□□□□ 0.41
XPO6-208ENST00000565698 PEG3Q9GZU2 1588 aa17.61■□□□□ 0.41
XPO6-208ENST00000565698 EIF4G1Q04637 1599 aaKnown RBP17.6■□□□□ 0.41
XPO6-208ENST00000565698 APLP2Q06481 763 aa17.56■□□□□ 0.4
XPO6-208ENST00000565698 EEA1Q15075 1411 aa17.56■□□□□ 0.4
XPO6-208ENST00000565698 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
XPO6-208ENST00000565698 RUSC2Q8N2Y8 1516 aa17.47■□□□□ 0.39
XPO6-208ENST00000565698 CEP162Q5TB80 1403 aa17.44■□□□□ 0.38
XPO6-208ENST00000565698 GOLGA3Q08378 1498 aa17.43■□□□□ 0.38
XPO6-208ENST00000565698 TNIKQ9UKE5 1360 aa17.43■□□□□ 0.38
XPO6-208ENST00000565698 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
XPO6-208ENST00000565698 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
XPO6-208ENST00000565698 SYNJ1O43426 1573 aa17.37■□□□□ 0.37
XPO6-208ENST00000565698 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
XPO6-208ENST00000565698 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
XPO6-208ENST00000565698 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
XPO6-208ENST00000565698 CLIP1P30622 1438 aa17.29■□□□□ 0.36
XPO6-208ENST00000565698 CFTRP13569 1480 aa17.27■□□□□ 0.36
XPO6-208ENST00000565698 CC2D2AQ9P2K1 1620 aa17.27■□□□□ 0.36
XPO6-208ENST00000565698 MYT1Q01538 1121 aa17.27■□□□□ 0.36
XPO6-208ENST00000565698 KIF27Q86VH2 1401 aa17.27■□□□□ 0.36
XPO6-208ENST00000565698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
XPO6-208ENST00000565698 ATP1B4Q9UN42 357 aaPredicted RBP17.21■□□□□ 0.35
XPO6-208ENST00000565698 TOP2BQ02880 1626 aa17.2■□□□□ 0.34
XPO6-208ENST00000565698 RAPGEF2Q9Y4G8 1499 aa17.2■□□□□ 0.34
XPO6-208ENST00000565698 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
XPO6-208ENST00000565698 CUX2O14529 1486 aa17.16■□□□□ 0.34
XPO6-208ENST00000565698 CUX1P39880 1505 aa17.15■□□□□ 0.34
XPO6-208ENST00000565698 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
XPO6-208ENST00000565698 KIF21BO75037 1637 aa17.1■□□□□ 0.33
XPO6-208ENST00000565698 P3H3Q8IVL6 736 aa17.06■□□□□ 0.32
XPO6-208ENST00000565698 VPS8Q8N3P4 1428 aa17.05■□□□□ 0.32
XPO6-208ENST00000565698 BIVM-ERCC5R4GMW8 1640 aa17.05■□□□□ 0.32
XPO6-208ENST00000565698 NESP48681 1621 aa17.05■□□□□ 0.32
XPO6-208ENST00000565698 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
XPO6-208ENST00000565698 CARMIL1Q5VZK9 1371 aa17.04■□□□□ 0.32
XPO6-208ENST00000565698 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
XPO6-208ENST00000565698 PDS5BQ9NTI5 1447 aa17■□□□□ 0.31
XPO6-208ENST00000565698 ITGAEP38570 1179 aa16.99■□□□□ 0.31
XPO6-208ENST00000565698 PRXQ9BXM0 1461 aa16.98■□□□□ 0.31
XPO6-208ENST00000565698 IGF1RP08069 1367 aa16.97■□□□□ 0.31
XPO6-208ENST00000565698 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
XPO6-208ENST00000565698 RAD54L2Q9Y4B4 1467 aa16.94■□□□□ 0.3
XPO6-208ENST00000565698 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
XPO6-208ENST00000565698 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
XPO6-208ENST00000565698 KANK4Q5T7N3 995 aaPredicted RBP16.86■□□□□ 0.29
XPO6-208ENST00000565698 POLA1P09884 1462 aaPredicted RBP16.85■□□□□ 0.29
XPO6-208ENST00000565698 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
XPO6-208ENST00000565698 LAMC3Q9Y6N6 1575 aa16.83■□□□□ 0.28
XPO6-208ENST00000565698 FAM50AQ14320 339 aaKnown RBP16.83■□□□□ 0.28
XPO6-208ENST00000565698 PRDM2Q13029 1718 aa16.82■□□□□ 0.28
XPO6-208ENST00000565698 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
XPO6-208ENST00000565698 ARHGAP35Q9NRY4 1499 aa16.76■□□□□ 0.27
XPO6-208ENST00000565698 FBLN2P98095 1184 aa16.76■□□□□ 0.27
XPO6-208ENST00000565698 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
XPO6-208ENST00000565698 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
XPO6-208ENST00000565698 URB2Q14146 1524 aaKnown RBP16.74■□□□□ 0.27
XPO6-208ENST00000565698 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms