RNA–Protein interactions for RNA: ENST00000307584.5

CAVIN4-201, Transcript of caveolae associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAVIN4, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN4-201ENST00000307584 NISCHQ9Y2I1 1504 aa22.44■■□□□ 1.18
CAVIN4-201ENST00000307584 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
CAVIN4-201ENST00000307584 ABCC9O60706 1549 aa19.11■□□□□ 0.65
CAVIN4-201ENST00000307584 MYO15BQ96JP2 1530 aa18.87■□□□□ 0.61
CAVIN4-201ENST00000307584 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
CAVIN4-201ENST00000307584 NACADO15069 1562 aa18.77■□□□□ 0.6
CAVIN4-201ENST00000307584 ZCCHC6Q5VYS8 1495 aaKnown RBP18.76■□□□□ 0.59
CAVIN4-201ENST00000307584 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
CAVIN4-201ENST00000307584 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
CAVIN4-201ENST00000307584 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
CAVIN4-201ENST00000307584 UNC13AQ9UPW8 1703 aa18.15■□□□□ 0.5
CAVIN4-201ENST00000307584 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.48
CAVIN4-201ENST00000307584 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
CAVIN4-201ENST00000307584 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
CAVIN4-201ENST00000307584 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
CAVIN4-201ENST00000307584 CC2D2AQ9P2K1 1620 aa17.42■□□□□ 0.38
CAVIN4-201ENST00000307584 BAZ1AQ9NRL2 1556 aaPredicted RBP17.41■□□□□ 0.38
CAVIN4-201ENST00000307584 SMARCA4P51532 1647 aa17.37■□□□□ 0.37
CAVIN4-201ENST00000307584 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
CAVIN4-201ENST00000307584 PEG3Q9GZU2 1588 aa17.36■□□□□ 0.37
CAVIN4-201ENST00000307584 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
CAVIN4-201ENST00000307584 NCAPD3P42695 1498 aa17.29■□□□□ 0.36
CAVIN4-201ENST00000307584 SMARCA2P51531 1590 aa17.29■□□□□ 0.36
CAVIN4-201ENST00000307584 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
CAVIN4-201ENST00000307584 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
CAVIN4-201ENST00000307584 MROH2BQ7Z745 1585 aa17.2■□□□□ 0.34
CAVIN4-201ENST00000307584 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
CAVIN4-201ENST00000307584 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
CAVIN4-201ENST00000307584 WIZO95785 1651 aa16.98■□□□□ 0.31
CAVIN4-201ENST00000307584 TOP2AP11388 1531 aaKnown RBP16.97■□□□□ 0.31
CAVIN4-201ENST00000307584 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
CAVIN4-201ENST00000307584 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
CAVIN4-201ENST00000307584 CFTRP13569 1480 aa16.69■□□□□ 0.26
CAVIN4-201ENST00000307584 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
CAVIN4-201ENST00000307584 PDS5BQ9NTI5 1447 aa16.63■□□□□ 0.25
CAVIN4-201ENST00000307584 PRDM2Q13029 1718 aa16.6■□□□□ 0.25
CAVIN4-201ENST00000307584 NESP48681 1621 aa16.58■□□□□ 0.24
CAVIN4-201ENST00000307584 CUX2O14529 1486 aa16.51■□□□□ 0.23
CAVIN4-201ENST00000307584 ERCC6Q03468 1493 aa16.5■□□□□ 0.23
CAVIN4-201ENST00000307584 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
CAVIN4-201ENST00000307584 FANCD2Q9BXW9 1451 aa16.48■□□□□ 0.23
CAVIN4-201ENST00000307584 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
CAVIN4-201ENST00000307584 CEP164Q9UPV0 1460 aa16.46■□□□□ 0.23
CAVIN4-201ENST00000307584 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
CAVIN4-201ENST00000307584 WDR62O43379 1518 aa16.44■□□□□ 0.22
CAVIN4-201ENST00000307584 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
CAVIN4-201ENST00000307584 ABCC8Q09428 1581 aa16.4■□□□□ 0.22
CAVIN4-201ENST00000307584 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
CAVIN4-201ENST00000307584 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
CAVIN4-201ENST00000307584 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
CAVIN4-201ENST00000307584 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
CAVIN4-201ENST00000307584 WDR97A6NE52 1622 aa16.2■□□□□ 0.18
CAVIN4-201ENST00000307584 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
CAVIN4-201ENST00000307584 HRCP23327 699 aa16.18■□□□□ 0.18
CAVIN4-201ENST00000307584 BIVM-ERCC5R4GMW8 1640 aa16.15■□□□□ 0.18
CAVIN4-201ENST00000307584 CUX1P39880 1505 aa16.15■□□□□ 0.18
CAVIN4-201ENST00000307584 TOP2BQ02880 1626 aa16.13■□□□□ 0.17
CAVIN4-201ENST00000307584 TARBP1Q13395 1621 aaKnown RBP16.11■□□□□ 0.17
CAVIN4-201ENST00000307584 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
CAVIN4-201ENST00000307584 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
CAVIN4-201ENST00000307584 FGD5Q6ZNL6 1462 aa16.06■□□□□ 0.16
CAVIN4-201ENST00000307584 SYNJ1O43426 1573 aa16.02■□□□□ 0.16
CAVIN4-201ENST00000307584 ABCA10Q8WWZ4 1543 aa16.02■□□□□ 0.16
CAVIN4-201ENST00000307584 SOGA1O94964 1423 aa16.01■□□□□ 0.15
CAVIN4-201ENST00000307584 EIF4G3O43432 1585 aaKnown RBP15.95■□□□□ 0.14
CAVIN4-201ENST00000307584 ABCA5Q8WWZ7 1642 aa15.94■□□□□ 0.14
CAVIN4-201ENST00000307584 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
CAVIN4-201ENST00000307584 ZNF608Q9ULD9 1512 aaPredicted RBP15.92■□□□□ 0.14
CAVIN4-201ENST00000307584 GRIN2BQ13224 1484 aa15.88■□□□□ 0.13
CAVIN4-201ENST00000307584 MAGI1Q96QZ7 1491 aaPredicted RBP15.87■□□□□ 0.13
CAVIN4-201ENST00000307584 ERICH3Q5RHP9 1530 aa15.86■□□□□ 0.13
CAVIN4-201ENST00000307584 GAPVD1Q14C86 1478 aa15.85■□□□□ 0.13
CAVIN4-201ENST00000307584 MYT1Q01538 1121 aa15.83■□□□□ 0.13
CAVIN4-201ENST00000307584 AQRO60306 1485 aaKnown RBP eCLIP15.83■□□□□ 0.12
CAVIN4-201ENST00000307584 PBRM1Q86U86 1689 aa15.82■□□□□ 0.12
CAVIN4-201ENST00000307584 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
CAVIN4-201ENST00000307584 KIF27Q86VH2 1401 aa15.78■□□□□ 0.12
CAVIN4-201ENST00000307584 SYNJ2O15056 1496 aa15.77■□□□□ 0.12
CAVIN4-201ENST00000307584 SNAPC4Q5SXM2 1469 aa15.76■□□□□ 0.11
CAVIN4-201ENST00000307584 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
CAVIN4-201ENST00000307584 FHAD1B1AJZ9 1412 aa15.74■□□□□ 0.11
CAVIN4-201ENST00000307584 CUL7Q14999 1698 aa15.73■□□□□ 0.11
CAVIN4-201ENST00000307584 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.11
CAVIN4-201ENST00000307584 EEA1Q15075 1411 aa15.7■□□□□ 0.1
CAVIN4-201ENST00000307584 IGF1RP08069 1367 aa15.68■□□□□ 0.1
CAVIN4-201ENST00000307584 CHD1O14646 1710 aa15.67■□□□□ 0.1
CAVIN4-201ENST00000307584 DNAJC5Q9H3Z4 198 aa15.67■□□□□ 0.1
CAVIN4-201ENST00000307584 OSCARQ8IYS5 282 aa15.66■□□□□ 0.1
CAVIN4-201ENST00000307584 CLASP1Q7Z460 1538 aa15.65■□□□□ 0.1
CAVIN4-201ENST00000307584 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
CAVIN4-201ENST00000307584 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
CAVIN4-201ENST00000307584 NUP160Q12769 1436 aa15.65■□□□□ 0.1
CAVIN4-201ENST00000307584 PCGF6Q9BYE7 350 aa15.63■□□□□ 0.09
CAVIN4-201ENST00000307584 CHIC1Q5VXU3 224 aa15.59■□□□□ 0.09
CAVIN4-201ENST00000307584 CHMP7Q8WUX9 453 aaPredicted RBP15.58■□□□□ 0.08
CAVIN4-201ENST00000307584 PRXQ9BXM0 1461 aa15.56■□□□□ 0.08
CAVIN4-201ENST00000307584 CARMIL1Q5VZK9 1371 aa15.56■□□□□ 0.08
CAVIN4-201ENST00000307584 SHROOM2Q13796 1616 aa15.55■□□□□ 0.08
CAVIN4-201ENST00000307584 CEP170Q5SW79 1584 aa15.54■□□□□ 0.08
CAVIN4-201ENST00000307584 RAPGEF2Q9Y4G8 1499 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms