RNA–Protein interactions for RNA: ENST00000537494.1

SMIM5-202, Transcript of small integral membrane protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM5, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5-202ENST00000537494 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
SMIM5-202ENST00000537494 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
SMIM5-202ENST00000537494 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
SMIM5-202ENST00000537494 SHROOM4Q9ULL8 1493 aa21.66■■□□□ 1.06
SMIM5-202ENST00000537494 EHMT2Q96KQ7 1210 aa20.75■□□□□ 0.91
SMIM5-202ENST00000537494 FAM9AQ8IZU1 332 aaPredicted RBP20.39■□□□□ 0.86
SMIM5-202ENST00000537494 TRIM41Q8WV44 630 aa20.08■□□□□ 0.81
SMIM5-202ENST00000537494 TTBK1Q5TCY1 1321 aaPredicted RBP19.95■□□□□ 0.78
SMIM5-202ENST00000537494 APLP2Q06481 763 aa19.92■□□□□ 0.78
SMIM5-202ENST00000537494 PCGF6Q9BYE7 350 aa19.91■□□□□ 0.78
SMIM5-202ENST00000537494 RANGAP1P46060 587 aaPredicted RBP19.88■□□□□ 0.77
SMIM5-202ENST00000537494 ABCC9O60706 1549 aa19.83■□□□□ 0.77
SMIM5-202ENST00000537494 UBTFP17480 764 aaKnown RBP19.69■□□□□ 0.74
SMIM5-202ENST00000537494 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
SMIM5-202ENST00000537494 PABPN1Q86U42 306 aaKnown RBP eCLIP19.58■□□□□ 0.73
SMIM5-202ENST00000537494 LOC105371045A0A1W2PR82 267 aa19.53■□□□□ 0.72
SMIM5-202ENST00000537494 ATP1B4Q9UN42 357 aaPredicted RBP19.51■□□□□ 0.71
SMIM5-202ENST00000537494 PPARGC1BQ86YN6 1023 aaKnown RBP19.5■□□□□ 0.71
SMIM5-202ENST00000537494 CCER1Q8TC90 406 aaPredicted RBP19.34■□□□□ 0.69
SMIM5-202ENST00000537494 ZCCHC6Q5VYS8 1495 aaKnown RBP19.2■□□□□ 0.66
SMIM5-202ENST00000537494 TRIM26Q12899 539 aaPredicted RBP19.14■□□□□ 0.66
SMIM5-202ENST00000537494 ZEB1P37275 1124 aaPredicted RBP19.14■□□□□ 0.65
SMIM5-202ENST00000537494 CCDC180Q9P1Z9 1646 aa19.02■□□□□ 0.63
SMIM5-202ENST00000537494 SCRIBQ14160 1630 aa18.99■□□□□ 0.63
SMIM5-202ENST00000537494 ITGAEP38570 1179 aa18.98■□□□□ 0.63
SMIM5-202ENST00000537494 HNRNPUL2Q1KMD3 747 aaKnown RBP18.91■□□□□ 0.62
SMIM5-202ENST00000537494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
SMIM5-202ENST00000537494 HRCP23327 699 aa18.86■□□□□ 0.61
SMIM5-202ENST00000537494 CENPBP07199 599 aaPredicted RBP18.69■□□□□ 0.58
SMIM5-202ENST00000537494 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
SMIM5-202ENST00000537494 CSRNP3Q8WYN3 585 aa18.66■□□□□ 0.58
SMIM5-202ENST00000537494 YTHDC1Q96MU7 727 aaKnown RBP18.65■□□□□ 0.58
SMIM5-202ENST00000537494 MYT1LQ9UL68 1186 aa18.56■□□□□ 0.56
SMIM5-202ENST00000537494 FAM50AQ14320 339 aaKnown RBP18.54■□□□□ 0.56
SMIM5-202ENST00000537494 FBLN2P98095 1184 aa18.53■□□□□ 0.56
SMIM5-202ENST00000537494 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
SMIM5-202ENST00000537494 P3H3Q8IVL6 736 aa18.51■□□□□ 0.55
SMIM5-202ENST00000537494 RB1CC1Q8TDY2 1594 aa18.51■□□□□ 0.55
SMIM5-202ENST00000537494 NACADO15069 1562 aa18.43■□□□□ 0.54
SMIM5-202ENST00000537494 POLR3GLQ9BT43 218 aa18.4■□□□□ 0.54
SMIM5-202ENST00000537494 ARID3CA6NKF2 412 aa18.37■□□□□ 0.53
SMIM5-202ENST00000537494 CNGB1Q14028 1251 aaPredicted RBP18.33■□□□□ 0.52
SMIM5-202ENST00000537494 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
SMIM5-202ENST00000537494 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
SMIM5-202ENST00000537494 TRIM52Q96A61 297 aa18.29■□□□□ 0.52
SMIM5-202ENST00000537494 NEUROD1Q13562 356 aa18.28■□□□□ 0.52
SMIM5-202ENST00000537494 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
SMIM5-202ENST00000537494 MYO15BQ96JP2 1530 aa18.23■□□□□ 0.51
SMIM5-202ENST00000537494 NEFLP07196 543 aa18.23■□□□□ 0.51
SMIM5-202ENST00000537494 BAZ1BQ9UIG0 1483 aaKnown RBP18.12■□□□□ 0.49
SMIM5-202ENST00000537494 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
SMIM5-202ENST00000537494 ZNF777Q9ULD5 760 aaPredicted RBP18.07■□□□□ 0.48
SMIM5-202ENST00000537494 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
SMIM5-202ENST00000537494 ZNF326Q5BKZ1 582 aaKnown RBP18.05■□□□□ 0.48
SMIM5-202ENST00000537494 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.47
SMIM5-202ENST00000537494 CDK11AQ9UQ88 783 aaPredicted RBP17.99■□□□□ 0.47
SMIM5-202ENST00000537494 CLIP1P30622 1438 aa17.98■□□□□ 0.47
SMIM5-202ENST00000537494 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
SMIM5-202ENST00000537494 SLC4A1APQ9BWU0 796 aaKnown RBP17.95■□□□□ 0.46
SMIM5-202ENST00000537494 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
SMIM5-202ENST00000537494 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
SMIM5-202ENST00000537494 CEP162Q5TB80 1403 aa17.9■□□□□ 0.46
SMIM5-202ENST00000537494 EEA1Q15075 1411 aa17.9■□□□□ 0.46
SMIM5-202ENST00000537494 CHIC2Q9UKJ5 165 aa17.88■□□□□ 0.45
SMIM5-202ENST00000537494 GOLGA3Q08378 1498 aa17.86■□□□□ 0.45
SMIM5-202ENST00000537494 CCDC88BA6NC98 1476 aa17.83■□□□□ 0.44
SMIM5-202ENST00000537494 SOGA1O94964 1423 aa17.82■□□□□ 0.44
SMIM5-202ENST00000537494 KIF27Q86VH2 1401 aa17.82■□□□□ 0.44
SMIM5-202ENST00000537494 MTUS2Q5JR59 1369 aa17.81■□□□□ 0.44
SMIM5-202ENST00000537494 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
SMIM5-202ENST00000537494 ANP32CO43423 234 aa17.78■□□□□ 0.44
SMIM5-202ENST00000537494 CEP164Q9UPV0 1460 aa17.73■□□□□ 0.43
SMIM5-202ENST00000537494 ABCC8Q09428 1581 aa17.73■□□□□ 0.43
SMIM5-202ENST00000537494 WIZO95785 1651 aa17.73■□□□□ 0.43
SMIM5-202ENST00000537494 TONSLQ96HA7 1378 aa17.7■□□□□ 0.42
SMIM5-202ENST00000537494 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMIM5-202ENST00000537494 GTF3C3Q9Y5Q9 886 aa17.66■□□□□ 0.42
SMIM5-202ENST00000537494 RRP7BPQ9NSQ0 103 aa17.65■□□□□ 0.42
SMIM5-202ENST00000537494 TSPY4P0CV99 314 aa17.64■□□□□ 0.42
SMIM5-202ENST00000537494 TSPY10P0CW01 314 aa17.64■□□□□ 0.42
SMIM5-202ENST00000537494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.42
SMIM5-202ENST00000537494 CUX2O14529 1486 aa17.64■□□□□ 0.41
SMIM5-202ENST00000537494 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
SMIM5-202ENST00000537494 DDX10Q13206 875 aaKnown RBP17.62■□□□□ 0.41
SMIM5-202ENST00000537494 CARMIL1Q5VZK9 1371 aa17.61■□□□□ 0.41
SMIM5-202ENST00000537494 KCNH8Q96L42 1107 aa17.61■□□□□ 0.41
SMIM5-202ENST00000537494 BCANQ96GW7 911 aa17.61■□□□□ 0.41
SMIM5-202ENST00000537494 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
SMIM5-202ENST00000537494 CHGAP10645 457 aaKnown RBP17.58■□□□□ 0.4
SMIM5-202ENST00000537494 HIRIP3Q9BW71 556 aaPredicted RBP17.57■□□□□ 0.4
SMIM5-202ENST00000537494 PLEKHD1A6NEE1 506 aa17.57■□□□□ 0.4
SMIM5-202ENST00000537494 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
SMIM5-202ENST00000537494 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
SMIM5-202ENST00000537494 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
SMIM5-202ENST00000537494 KDM2AQ9Y2K7 1162 aa17.51■□□□□ 0.39
SMIM5-202ENST00000537494 ACIN1Q9UKV3 1341 aaKnown RBP17.49■□□□□ 0.39
SMIM5-202ENST00000537494 CFDP1Q9UEE9 299 aaPredicted RBP17.48■□□□□ 0.39
SMIM5-202ENST00000537494 SMARCA4P51532 1647 aa17.48■□□□□ 0.39
SMIM5-202ENST00000537494 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
SMIM5-202ENST00000537494 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms