RNA–Protein interactions for RNA: ENST00000522605.1

PCDHGB2-201, Transcript of protocadherin gamma subfamily B, 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB2, Length 4,602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB2-201ENST00000522605 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
PCDHGB2-201ENST00000522605 DCAF8L2P0C7V8 631 aa21.55■■□□□ 1.04
PCDHGB2-201ENST00000522605 SHROOM4Q9ULL8 1493 aa20.79■□□□□ 0.92
PCDHGB2-201ENST00000522605 SUPT5HO00267 1087 aaKnown RBP20.77■□□□□ 0.91
PCDHGB2-201ENST00000522605 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
PCDHGB2-201ENST00000522605 EHMT2Q96KQ7 1210 aa19.85■□□□□ 0.77
PCDHGB2-201ENST00000522605 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
PCDHGB2-201ENST00000522605 HRCP23327 699 aa19.7■□□□□ 0.74
PCDHGB2-201ENST00000522605 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
PCDHGB2-201ENST00000522605 LOC105371045A0A1W2PR82 267 aa19.33■□□□□ 0.69
PCDHGB2-201ENST00000522605 FAM9AQ8IZU1 332 aaPredicted RBP19.31■□□□□ 0.68
PCDHGB2-201ENST00000522605 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
PCDHGB2-201ENST00000522605 TRIM26Q12899 539 aaPredicted RBP19.29■□□□□ 0.68
PCDHGB2-201ENST00000522605 CCDC180Q9P1Z9 1646 aa19.27■□□□□ 0.68
PCDHGB2-201ENST00000522605 ZEB1P37275 1124 aaPredicted RBP19.26■□□□□ 0.67
PCDHGB2-201ENST00000522605 APLP2Q06481 763 aa19.26■□□□□ 0.67
PCDHGB2-201ENST00000522605 PPARGC1BQ86YN6 1023 aaKnown RBP19.24■□□□□ 0.67
PCDHGB2-201ENST00000522605 MYO15BQ96JP2 1530 aa19.16■□□□□ 0.66
PCDHGB2-201ENST00000522605 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
PCDHGB2-201ENST00000522605 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
PCDHGB2-201ENST00000522605 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
PCDHGB2-201ENST00000522605 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
PCDHGB2-201ENST00000522605 CCER1Q8TC90 406 aaPredicted RBP18.85■□□□□ 0.61
PCDHGB2-201ENST00000522605 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
PCDHGB2-201ENST00000522605 CENPBP07199 599 aaPredicted RBP18.67■□□□□ 0.58
PCDHGB2-201ENST00000522605 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
PCDHGB2-201ENST00000522605 UBTFP17480 764 aaKnown RBP18.59■□□□□ 0.57
PCDHGB2-201ENST00000522605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.53■□□□□ 0.56
PCDHGB2-201ENST00000522605 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
PCDHGB2-201ENST00000522605 ABCC9O60706 1549 aa18.44■□□□□ 0.54
PCDHGB2-201ENST00000522605 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
PCDHGB2-201ENST00000522605 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
PCDHGB2-201ENST00000522605 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
PCDHGB2-201ENST00000522605 ERICH6Q7L0X2 663 aa18.29■□□□□ 0.52
PCDHGB2-201ENST00000522605 ACIN1Q9UKV3 1341 aaKnown RBP18.21■□□□□ 0.51
PCDHGB2-201ENST00000522605 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
PCDHGB2-201ENST00000522605 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
PCDHGB2-201ENST00000522605 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
PCDHGB2-201ENST00000522605 MYT1Q01538 1121 aa18.13■□□□□ 0.49
PCDHGB2-201ENST00000522605 NEFLP07196 543 aa18.12■□□□□ 0.49
PCDHGB2-201ENST00000522605 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
PCDHGB2-201ENST00000522605 CECR2Q9BXF3 1484 aa18.1■□□□□ 0.49
PCDHGB2-201ENST00000522605 ITGAEP38570 1179 aa18.1■□□□□ 0.49
PCDHGB2-201ENST00000522605 NACADO15069 1562 aa18.1■□□□□ 0.49
PCDHGB2-201ENST00000522605 ZNF316A6NFI3 1004 aaPredicted RBP18.08■□□□□ 0.49
PCDHGB2-201ENST00000522605 MYT1LQ9UL68 1186 aa18.03■□□□□ 0.48
PCDHGB2-201ENST00000522605 NEUROD1Q13562 356 aa18.03■□□□□ 0.48
PCDHGB2-201ENST00000522605 MROH2BQ7Z745 1585 aa18.01■□□□□ 0.47
PCDHGB2-201ENST00000522605 POLR3GLQ9BT43 218 aa17.97■□□□□ 0.47
PCDHGB2-201ENST00000522605 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
PCDHGB2-201ENST00000522605 CEP162Q5TB80 1403 aa17.95■□□□□ 0.46
PCDHGB2-201ENST00000522605 CNGB1Q14028 1251 aaPredicted RBP17.91■□□□□ 0.46
PCDHGB2-201ENST00000522605 BAZ1AQ9NRL2 1556 aaPredicted RBP17.9■□□□□ 0.46
PCDHGB2-201ENST00000522605 EEA1Q15075 1411 aa17.88■□□□□ 0.45
PCDHGB2-201ENST00000522605 TNIKQ9UKE5 1360 aa17.87■□□□□ 0.45
PCDHGB2-201ENST00000522605 WIZO95785 1651 aa17.85■□□□□ 0.45
PCDHGB2-201ENST00000522605 GOLGA3Q08378 1498 aa17.8■□□□□ 0.44
PCDHGB2-201ENST00000522605 SOGA1O94964 1423 aa17.76■□□□□ 0.43
PCDHGB2-201ENST00000522605 ABCC8Q09428 1581 aa17.75■□□□□ 0.43
PCDHGB2-201ENST00000522605 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
PCDHGB2-201ENST00000522605 CLIP1P30622 1438 aa17.72■□□□□ 0.43
PCDHGB2-201ENST00000522605 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.42
PCDHGB2-201ENST00000522605 MIER1Q8N108 512 aa17.7■□□□□ 0.42
PCDHGB2-201ENST00000522605 TOP2AP11388 1531 aaKnown RBP17.66■□□□□ 0.42
PCDHGB2-201ENST00000522605 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
PCDHGB2-201ENST00000522605 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
PCDHGB2-201ENST00000522605 DAXXQ9UER7 740 aaPredicted RBP17.62■□□□□ 0.41
PCDHGB2-201ENST00000522605 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
PCDHGB2-201ENST00000522605 FAM50AQ14320 339 aaKnown RBP17.51■□□□□ 0.39
PCDHGB2-201ENST00000522605 SMARCA4P51532 1647 aa17.51■□□□□ 0.39
PCDHGB2-201ENST00000522605 VPS8Q8N3P4 1428 aa17.48■□□□□ 0.39
PCDHGB2-201ENST00000522605 RUSC2Q8N2Y8 1516 aa17.48■□□□□ 0.39
PCDHGB2-201ENST00000522605 SMARCA2P51531 1590 aa17.46■□□□□ 0.38
PCDHGB2-201ENST00000522605 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
PCDHGB2-201ENST00000522605 TRIM52Q96A61 297 aa17.44■□□□□ 0.38
PCDHGB2-201ENST00000522605 BCANQ96GW7 911 aa17.38■□□□□ 0.37
PCDHGB2-201ENST00000522605 FBLN2P98095 1184 aa17.35■□□□□ 0.37
PCDHGB2-201ENST00000522605 ANP32CO43423 234 aa17.34■□□□□ 0.37
PCDHGB2-201ENST00000522605 ZNF326Q5BKZ1 582 aaKnown RBP17.32■□□□□ 0.36
PCDHGB2-201ENST00000522605 P3H3Q8IVL6 736 aa17.3■□□□□ 0.36
PCDHGB2-201ENST00000522605 RAPGEF2Q9Y4G8 1499 aa17.28■□□□□ 0.36
PCDHGB2-201ENST00000522605 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
PCDHGB2-201ENST00000522605 DDX10Q13206 875 aaKnown RBP17.28■□□□□ 0.36
PCDHGB2-201ENST00000522605 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
PCDHGB2-201ENST00000522605 FKBP8Q14318 412 aa17.23■□□□□ 0.35
PCDHGB2-201ENST00000522605 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
PCDHGB2-201ENST00000522605 SUPT16HQ9Y5B9 1047 aaKnown RBP17.21■□□□□ 0.35
PCDHGB2-201ENST00000522605 ARID3CA6NKF2 412 aa17.2■□□□□ 0.34
PCDHGB2-201ENST00000522605 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
PCDHGB2-201ENST00000522605 KIF21BO75037 1637 aa17.17■□□□□ 0.34
PCDHGB2-201ENST00000522605 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
PCDHGB2-201ENST00000522605 EIF4G1Q04637 1599 aaKnown RBP17.16■□□□□ 0.34
PCDHGB2-201ENST00000522605 TONSLQ96HA7 1378 aa17.15■□□□□ 0.34
PCDHGB2-201ENST00000522605 RTL5Q5HYW3 569 aaPredicted RBP17.13■□□□□ 0.33
PCDHGB2-201ENST00000522605 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
PCDHGB2-201ENST00000522605 BCL11AQ9H165 835 aa17.09■□□□□ 0.33
PCDHGB2-201ENST00000522605 HIRIP3Q9BW71 556 aaPredicted RBP17.08■□□□□ 0.32
PCDHGB2-201ENST00000522605 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
PCDHGB2-201ENST00000522605 CDK11AQ9UQ88 783 aaPredicted RBP17.06■□□□□ 0.32
PCDHGB2-201ENST00000522605 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms