RNA–Protein interactions for RNA: ENST00000395218.3

PTK2-202, Transcript of protein tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene PTK2, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-202ENST00000395218 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
PTK2-202ENST00000395218 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
PTK2-202ENST00000395218 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
PTK2-202ENST00000395218 SHROOM4Q9ULL8 1493 aa23.77■■□□□ 1.4
PTK2-202ENST00000395218 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
PTK2-202ENST00000395218 FAM9AQ8IZU1 332 aaPredicted RBP22.39■■□□□ 1.17
PTK2-202ENST00000395218 PCGF6Q9BYE7 350 aa22.34■■□□□ 1.17
PTK2-202ENST00000395218 TTBK1Q5TCY1 1321 aaPredicted RBP22.11■■□□□ 1.13
PTK2-202ENST00000395218 LOC105371045A0A1W2PR82 267 aa21.81■■□□□ 1.08
PTK2-202ENST00000395218 PPARGC1BQ86YN6 1023 aaKnown RBP21.79■■□□□ 1.08
PTK2-202ENST00000395218 TRIM41Q8WV44 630 aa21.74■■□□□ 1.07
PTK2-202ENST00000395218 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
PTK2-202ENST00000395218 RANGAP1P46060 587 aaPredicted RBP21.67■■□□□ 1.06
PTK2-202ENST00000395218 HRCP23327 699 aa21.35■■□□□ 1.01
PTK2-202ENST00000395218 CCER1Q8TC90 406 aaPredicted RBP21.28■■□□□ 1
PTK2-202ENST00000395218 UBTFP17480 764 aaKnown RBP21.23■□□□□ 0.99
PTK2-202ENST00000395218 APLP2Q06481 763 aa21.22■□□□□ 0.99
PTK2-202ENST00000395218 TRIM26Q12899 539 aaPredicted RBP21.15■□□□□ 0.98
PTK2-202ENST00000395218 YTHDC1Q96MU7 727 aaKnown RBP20.98■□□□□ 0.95
PTK2-202ENST00000395218 ATP1B4Q9UN42 357 aaPredicted RBP20.94■□□□□ 0.94
PTK2-202ENST00000395218 ABCC9O60706 1549 aa20.93■□□□□ 0.94
PTK2-202ENST00000395218 ZEB1P37275 1124 aaPredicted RBP20.92■□□□□ 0.94
PTK2-202ENST00000395218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.91■□□□□ 0.94
PTK2-202ENST00000395218 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.92
PTK2-202ENST00000395218 HNRNPUL2Q1KMD3 747 aaKnown RBP20.79■□□□□ 0.92
PTK2-202ENST00000395218 ITGAEP38570 1179 aa20.73■□□□□ 0.91
PTK2-202ENST00000395218 MYO15BQ96JP2 1530 aa20.69■□□□□ 0.9
PTK2-202ENST00000395218 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
PTK2-202ENST00000395218 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.9
PTK2-202ENST00000395218 SCRIBQ14160 1630 aa20.41■□□□□ 0.86
PTK2-202ENST00000395218 DIEXFQ68CQ4 756 aaKnown RBP20.36■□□□□ 0.85
PTK2-202ENST00000395218 PELP1Q8IZL8 1130 aaKnown RBP20.28■□□□□ 0.84
PTK2-202ENST00000395218 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
PTK2-202ENST00000395218 CSRNP3Q8WYN3 585 aa20.13■□□□□ 0.81
PTK2-202ENST00000395218 GTF3C3Q9Y5Q9 886 aa20.1■□□□□ 0.81
PTK2-202ENST00000395218 DCAF1Q9Y4B6 1507 aa20.05■□□□□ 0.8
PTK2-202ENST00000395218 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
PTK2-202ENST00000395218 P3H3Q8IVL6 736 aa20.05■□□□□ 0.8
PTK2-202ENST00000395218 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
PTK2-202ENST00000395218 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
PTK2-202ENST00000395218 NEUROD1Q13562 356 aa20.03■□□□□ 0.8
PTK2-202ENST00000395218 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.8
PTK2-202ENST00000395218 ARID3CA6NKF2 412 aa19.91■□□□□ 0.78
PTK2-202ENST00000395218 NEFLP07196 543 aa19.9■□□□□ 0.78
PTK2-202ENST00000395218 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
PTK2-202ENST00000395218 BCANQ96GW7 911 aa19.88■□□□□ 0.77
PTK2-202ENST00000395218 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
PTK2-202ENST00000395218 ACIN1Q9UKV3 1341 aaKnown RBP19.83■□□□□ 0.76
PTK2-202ENST00000395218 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
PTK2-202ENST00000395218 ERICH6Q7L0X2 663 aa19.74■□□□□ 0.75
PTK2-202ENST00000395218 TRIM52Q96A61 297 aa19.69■□□□□ 0.74
PTK2-202ENST00000395218 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.73
PTK2-202ENST00000395218 HIRIP3Q9BW71 556 aaPredicted RBP19.63■□□□□ 0.73
PTK2-202ENST00000395218 MIER1Q8N108 512 aa19.62■□□□□ 0.73
PTK2-202ENST00000395218 ZNF326Q5BKZ1 582 aaKnown RBP19.6■□□□□ 0.73
PTK2-202ENST00000395218 CEP162Q5TB80 1403 aa19.58■□□□□ 0.72
PTK2-202ENST00000395218 FBLN2P98095 1184 aa19.56■□□□□ 0.72
PTK2-202ENST00000395218 MYT1LQ9UL68 1186 aa19.54■□□□□ 0.72
PTK2-202ENST00000395218 SOGA1O94964 1423 aa19.53■□□□□ 0.72
PTK2-202ENST00000395218 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
PTK2-202ENST00000395218 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
PTK2-202ENST00000395218 CLIP1P30622 1438 aa19.48■□□□□ 0.71
PTK2-202ENST00000395218 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
PTK2-202ENST00000395218 CHIC2Q9UKJ5 165 aa19.42■□□□□ 0.7
PTK2-202ENST00000395218 ANP32CO43423 234 aa19.39■□□□□ 0.69
PTK2-202ENST00000395218 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
PTK2-202ENST00000395218 CCDC88BA6NC98 1476 aa19.37■□□□□ 0.69
PTK2-202ENST00000395218 ZNF777Q9ULD5 760 aaPredicted RBP19.36■□□□□ 0.69
PTK2-202ENST00000395218 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
PTK2-202ENST00000395218 NACADO15069 1562 aa19.28■□□□□ 0.68
PTK2-202ENST00000395218 FKBP8Q14318 412 aa19.28■□□□□ 0.68
PTK2-202ENST00000395218 TNIKQ9UKE5 1360 aa19.28■□□□□ 0.68
PTK2-202ENST00000395218 GOLGA3Q08378 1498 aa19.27■□□□□ 0.68
PTK2-202ENST00000395218 WIZO95785 1651 aa19.27■□□□□ 0.68
PTK2-202ENST00000395218 SLC4A1APQ9BWU0 796 aaKnown RBP19.23■□□□□ 0.67
PTK2-202ENST00000395218 SIN3AQ96ST3 1273 aa19.23■□□□□ 0.67
PTK2-202ENST00000395218 IRX6P78412 446 aaPredicted RBP19.21■□□□□ 0.67
PTK2-202ENST00000395218 KANK4Q5T7N3 995 aaPredicted RBP19.2■□□□□ 0.66
PTK2-202ENST00000395218 BAZ1AQ9NRL2 1556 aaPredicted RBP19.2■□□□□ 0.66
PTK2-202ENST00000395218 RUSC2Q8N2Y8 1516 aa19.19■□□□□ 0.66
PTK2-202ENST00000395218 RRP7BPQ9NSQ0 103 aa19.18■□□□□ 0.66
PTK2-202ENST00000395218 BAZ1BQ9UIG0 1483 aaKnown RBP19.17■□□□□ 0.66
PTK2-202ENST00000395218 TONSLQ96HA7 1378 aa19.16■□□□□ 0.66
PTK2-202ENST00000395218 HNRNPUQ00839 825 aaKnown RBP eCLIP19.16■□□□□ 0.66
PTK2-202ENST00000395218 FAM9BQ8IZU0 186 aa19.15■□□□□ 0.66
PTK2-202ENST00000395218 SALL2Q9Y467 1007 aaPredicted RBP19.13■□□□□ 0.65
PTK2-202ENST00000395218 EEA1Q15075 1411 aa19.08■□□□□ 0.65
PTK2-202ENST00000395218 CEP164Q9UPV0 1460 aa19.07■□□□□ 0.64
PTK2-202ENST00000395218 MTUS2Q5JR59 1369 aa19.06■□□□□ 0.64
PTK2-202ENST00000395218 MYT1Q01538 1121 aa19.05■□□□□ 0.64
PTK2-202ENST00000395218 KDM2AQ9Y2K7 1162 aa18.99■□□□□ 0.63
PTK2-202ENST00000395218 CDK11AQ9UQ88 783 aaPredicted RBP18.98■□□□□ 0.63
PTK2-202ENST00000395218 KIF27Q86VH2 1401 aa18.96■□□□□ 0.63
PTK2-202ENST00000395218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.94■□□□□ 0.623e-7■■■■□ 25.2
PTK2-202ENST00000395218 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
PTK2-202ENST00000395218 DAXXQ9UER7 740 aaPredicted RBP18.9■□□□□ 0.62
PTK2-202ENST00000395218 BCL11AQ9H165 835 aa18.9■□□□□ 0.62
PTK2-202ENST00000395218 VPS8Q8N3P4 1428 aa18.89■□□□□ 0.61
PTK2-202ENST00000395218 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
PTK2-202ENST00000395218 MRS2Q9HD23 443 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms