RNA–Protein interactions for RNA: ENST00000399909.5

GRIK1-205, Transcript of glutamate ionotropic receptor kainate type subunit 1, humanhuman

TSL 5 BASIC

Gene GRIK1, Length 3,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1-205ENST00000399909 PPARGC1BQ86YN6 1023 aaKnown RBP18.33■□□□□ 0.53
GRIK1-205ENST00000399909 PCGF6Q9BYE7 350 aa18.22■□□□□ 0.51
GRIK1-205ENST00000399909 NISCHQ9Y2I1 1504 aa18.2■□□□□ 0.5
GRIK1-205ENST00000399909 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
GRIK1-205ENST00000399909 HRCP23327 699 aa18.09■□□□□ 0.49
GRIK1-205ENST00000399909 SHROOM4Q9ULL8 1493 aa17.96■□□□□ 0.47
GRIK1-205ENST00000399909 PELP1Q8IZL8 1130 aaKnown RBP17.75■□□□□ 0.43
GRIK1-205ENST00000399909 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
GRIK1-205ENST00000399909 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
GRIK1-205ENST00000399909 LOC105371045A0A1W2PR82 267 aa17.3■□□□□ 0.36
GRIK1-205ENST00000399909 DCAF8L2P0C7V8 631 aa17.22■□□□□ 0.35
GRIK1-205ENST00000399909 CHIC1Q5VXU3 224 aa17.13■□□□□ 0.33
GRIK1-205ENST00000399909 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
GRIK1-205ENST00000399909 GTF3C3Q9Y5Q9 886 aa17.1■□□□□ 0.33
GRIK1-205ENST00000399909 MYO15BQ96JP2 1530 aa17.07■□□□□ 0.32
GRIK1-205ENST00000399909 MYT1Q01538 1121 aa17.03■□□□□ 0.32
GRIK1-205ENST00000399909 TTBK1Q5TCY1 1321 aaPredicted RBP17.02■□□□□ 0.31
GRIK1-205ENST00000399909 FAM9AQ8IZU1 332 aaPredicted RBP17.01■□□□□ 0.31
GRIK1-205ENST00000399909 NEUROD1Q13562 356 aa17■□□□□ 0.31
GRIK1-205ENST00000399909 TRIM26Q12899 539 aaPredicted RBP16.98■□□□□ 0.31
GRIK1-205ENST00000399909 ACIN1Q9UKV3 1341 aaKnown RBP16.89■□□□□ 0.29
GRIK1-205ENST00000399909 CENPBP07199 599 aaPredicted RBP16.87■□□□□ 0.29
GRIK1-205ENST00000399909 ZEB1P37275 1124 aaPredicted RBP16.8■□□□□ 0.28
GRIK1-205ENST00000399909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
GRIK1-205ENST00000399909 CCER1Q8TC90 406 aaPredicted RBP16.77■□□□□ 0.28
GRIK1-205ENST00000399909 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
GRIK1-205ENST00000399909 BCL11AQ9H165 835 aa16.43■□□□□ 0.22
GRIK1-205ENST00000399909 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
GRIK1-205ENST00000399909 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
GRIK1-205ENST00000399909 BCANQ96GW7 911 aa16.34■□□□□ 0.21
GRIK1-205ENST00000399909 MIER1Q8N108 512 aa16.19■□□□□ 0.18
GRIK1-205ENST00000399909 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
GRIK1-205ENST00000399909 CCDC180Q9P1Z9 1646 aa16.1■□□□□ 0.17
GRIK1-205ENST00000399909 ANP32EQ9BTT0 268 aa16.08■□□□□ 0.16
GRIK1-205ENST00000399909 ZNF316A6NFI3 1004 aaPredicted RBP16.06■□□□□ 0.16
GRIK1-205ENST00000399909 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
GRIK1-205ENST00000399909 RANGAP1P46060 587 aaPredicted RBP16.03■□□□□ 0.16
GRIK1-205ENST00000399909 ERICH6Q7L0X2 663 aa16.01■□□□□ 0.15
GRIK1-205ENST00000399909 ITGAEP38570 1179 aa15.91■□□□□ 0.14
GRIK1-205ENST00000399909 SUPT16HQ9Y5B9 1047 aaKnown RBP15.91■□□□□ 0.14
GRIK1-205ENST00000399909 TSHZ2Q9NRE2 1034 aa15.9■□□□□ 0.14
GRIK1-205ENST00000399909 PRKCSHP14314 528 aaPredicted RBP15.87■□□□□ 0.13
GRIK1-205ENST00000399909 FKBP8Q14318 412 aa15.8■□□□□ 0.12
GRIK1-205ENST00000399909 UBTFP17480 764 aaKnown RBP15.75■□□□□ 0.11
GRIK1-205ENST00000399909 NEFLP07196 543 aa15.75■□□□□ 0.11
GRIK1-205ENST00000399909 IRX6P78412 446 aaPredicted RBP15.65■□□□□ 0.1
GRIK1-205ENST00000399909 NBR1Q14596 966 aa15.64■□□□□ 0.09
GRIK1-205ENST00000399909 CCDC136Q96JN2 1154 aa15.63■□□□□ 0.09
GRIK1-205ENST00000399909 KCNH8Q96L42 1107 aa15.63■□□□□ 0.09
GRIK1-205ENST00000399909 RTN4Q9NQC3 1192 aaKnown RBP15.63■□□□□ 0.09
GRIK1-205ENST00000399909 TRIM52Q96A61 297 aa15.6■□□□□ 0.09
GRIK1-205ENST00000399909 RBM19Q9Y4C8 960 aaKnown RBP15.6■□□□□ 0.09
GRIK1-205ENST00000399909 APLP2Q06481 763 aa15.58■□□□□ 0.08
GRIK1-205ENST00000399909 ANO8Q9HCE9 1232 aaPredicted RBP15.56■□□□□ 0.08
GRIK1-205ENST00000399909 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.51■□□□□ 0.07
GRIK1-205ENST00000399909 HIRIP3Q9BW71 556 aaPredicted RBP15.5■□□□□ 0.07
GRIK1-205ENST00000399909 CNGB1Q14028 1251 aaPredicted RBP15.49■□□□□ 0.07
GRIK1-205ENST00000399909 DEKP35659 375 aaKnown RBP15.44■□□□□ 0.06
GRIK1-205ENST00000399909 EIF5BO60841 1220 aaKnown RBP15.43■□□□□ 0.06
GRIK1-205ENST00000399909 DDX10Q13206 875 aaKnown RBP15.42■□□□□ 0.06
GRIK1-205ENST00000399909 ZCCHC6Q5VYS8 1495 aaKnown RBP15.38■□□□□ 0.05
GRIK1-205ENST00000399909 CDK11AQ9UQ88 783 aaPredicted RBP15.37■□□□□ 0.05
GRIK1-205ENST00000399909 MSH5O43196 834 aa15.37■□□□□ 0.05
GRIK1-205ENST00000399909 SALL2Q9Y467 1007 aaPredicted RBP15.35■□□□□ 0.05
GRIK1-205ENST00000399909 SENP3-EIF4A1A0A087X0R7 540 aa15.33■□□□□ 0.04
GRIK1-205ENST00000399909 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
GRIK1-205ENST00000399909 CLSPNQ9HAW4 1339 aa15.27■□□□□ 0.04
GRIK1-205ENST00000399909 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
GRIK1-205ENST00000399909 HNRNPUQ00839 825 aaKnown RBP eCLIP15.2■□□□□ 0.02
GRIK1-205ENST00000399909 IL27Q8NEV9 243 aa15.18■□□□□ 0.02
GRIK1-205ENST00000399909 B4GALNT3Q6L9W6 998 aa15.15■□□□□ 0.02
GRIK1-205ENST00000399909 CEP162Q5TB80 1403 aa15.14■□□□□ 0.01
GRIK1-205ENST00000399909 ATP1B4Q9UN42 357 aaPredicted RBP15.13■□□□□ 0.01
GRIK1-205ENST00000399909 ANP32CO43423 234 aa15.13■□□□□ 0.01
GRIK1-205ENST00000399909 LAS1LQ9Y4W2 734 aaKnown RBP15.09■□□□□ 0.01
GRIK1-205ENST00000399909 PAK3O75914 559 aaPredicted RBP15.05■□□□□ 0
GRIK1-205ENST00000399909 POLR3GLQ9BT43 218 aa15.05■□□□□ -0
GRIK1-205ENST00000399909 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
GRIK1-205ENST00000399909 RB1CC1Q8TDY2 1594 aa15.05■□□□□ -0
GRIK1-205ENST00000399909 NOP58Q9Y2X3 529 aaKnown RBP15.04■□□□□ -0
GRIK1-205ENST00000399909 FAM9BQ8IZU0 186 aa15.02□□□□□ -0.01
GRIK1-205ENST00000399909 SIN3AQ96ST3 1273 aa15.01□□□□□ -0.01
GRIK1-205ENST00000399909 ANP32AP39687 249 aaKnown RBP14.99□□□□□ -0.01
GRIK1-205ENST00000399909 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
GRIK1-205ENST00000399909 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
GRIK1-205ENST00000399909 ARXQ96QS3 562 aa14.97□□□□□ -0.01
GRIK1-205ENST00000399909 TIMELESSQ9UNS1 1208 aa14.97□□□□□ -0.01
GRIK1-205ENST00000399909 FAM50AQ14320 339 aaKnown RBP14.94□□□□□ -0.02
GRIK1-205ENST00000399909 SOGA1O94964 1423 aa14.93□□□□□ -0.02
GRIK1-205ENST00000399909 NEFMP07197 916 aa14.9□□□□□ -0.02
GRIK1-205ENST00000399909 FANCIQ9NVI1 1328 aa14.89□□□□□ -0.03
GRIK1-205ENST00000399909 MYT1LQ9UL68 1186 aa14.89□□□□□ -0.03
GRIK1-205ENST00000399909 ABCC9O60706 1549 aa14.86□□□□□ -0.03
GRIK1-205ENST00000399909 SCRIBQ14160 1630 aa14.83□□□□□ -0.04
GRIK1-205ENST00000399909 BRPF3Q9ULD4 1205 aa14.83□□□□□ -0.04
GRIK1-205ENST00000399909 DHX57Q6P158 1386 aaKnown RBP14.82□□□□□ -0.04
GRIK1-205ENST00000399909 PPP4R2Q9NY27 417 aa14.81□□□□□ -0.04
GRIK1-205ENST00000399909 DAXXQ9UER7 740 aaPredicted RBP14.8□□□□□ -0.04
GRIK1-205ENST00000399909 CCDC88BA6NC98 1476 aa14.8□□□□□ -0.04
GRIK1-205ENST00000399909 KANK4Q5T7N3 995 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms